Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400067211
CDS Infomation

pacid=37450876 polypeptide=PGSC0003DMP400045341 locus=PGSC0003DMG400026132 ID=PGSC0003DMT400067211.v4.03 annot-version=v4.03
Sequence

ATGTGGAAGCATTTTCTGAGTAAGCTTCCGAAGAAATCACTGAAATCTGAGTCAGTAGAC
TTAGGAAGAGGCAATTCGGACTCACACAGCCCGAATGCAAGCTCAAATTTAGGTCCTGGA
AGGCCTAATAGTGTTCCAAGGAGGACTTCCTCAGTTGTGTTCCCAGCAAGTGTGATTGCA
GGGATTGAGCCTTTGATTTCCTTCAAAGATGTTCCCAGCTCTGAAAAGATGAATCTTTTT
ATCAGTAAGTTAAGTCTCTGCTGTGTAGACTTTGATTTCAGGGACCCAACTAAGAATGTA
GCAGAAAAGGAACTAAAAAGGGCTACATTGTTTGAGCTTTTGGATTTTGTATCTGCTAAT
CCACCCAAATTTTCAGAACCTGCAATTCTTGCATTGTGTAAAACATGTGCTGTTAATTTG
TTTCGGGTTTTCCCTCCTAATTATCGGTCTAATAGTAGCCAGACCAGCGAAAATGATGAT
GATGAGCCTACTTTTGACCCTGCCTGGCCTCACTTGCAAATTGTGTATGATCTGTTGCTC
AAGTTTGTAACATCTTCTTCTCTAGAAGCTAAGGTTGCAAAGAAGTATATAAACCATCAG
TTCATCTTGAAATTACTTGACTTGTTTGATTCTGAAGATCCAAGGGAAAGAGATTGTTTG
AAAGCTATTTTGCATAGGATTTATGGCAAGTTCATGGTTCATAGACCTTACATAAGGAAG
AGTATAAGCAATATGTTTTACCGCGTTGTGTTTGAGTCTGAGAAACATAATGGGATTGCT
GAACTTTTGGAGATTTTCGGAAGTGTGGTGACAGGGTTTGCTCTGCCATTGAAAGAGGAG
CATAAGATCTTTTTGTCAAGGACCTTGATTCCTTTGCACAAGCCAAAATCCTTGGGGATT
TACTTTCAACAGTTATCATATTGCATTAACCAGTTCATAGAGAAAGATCCCAAATTGGCT
AGCACTGTGATTAGGGGTTTGTTGAAGTACTGGCCTATCACAAGTACCCAAAAGGAGGTG
ATGTTTTTGAGTGAGCTGGAAGAAATTTTGGAAGTTATTAACATGGCTGAGTTCCAAAAA
GTGATGGTTCCCTTGTTCTGGCGGATCGGTTGCTGCATCAATAGTTACCATTTTCAGGTT
GCTGAAAGGGCTCTGTTCCTTTGGAATAATGACCAAATTGTCAATTTGATTGCACATAAC
CGGCATGTGATTCTCCCGATTATATTCCCAGCTGTGGAAAGCAATGCTCAGAACCACTGG
AATCATGCTGTGCAGAACTTGAGTCTAAACGTAAGAAGGATGTTCTCCGAAATGGATGAT
GTGCTTTTCCTTGCTTGCCATTCGCATTACAAGGAAGAACAGGAAAAAATAAACTTGGAA
TCTGAGAAACGGAAGGAAGCATGGGAACAGCTGGAGACTGCAGCTAGTCTACGTCCACCT
GTAGCTGGAAACATTGCTGTCCTGGTAATGCCTTTAGCAACTTCAATCACTTGCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400045341
PEP Infomation

pacid=37450876 transcript=PGSC0003DMT400067211 locus=PGSC0003DMG400026132 ID=PGSC0003DMT400067211.v4.03 annot-version=v4.03
Sequence

MWKHFLSKLPKKSLKSESVDLGRGNSDSHSPNASSNLGPGRPNSVPRRTSSVVFPASVIA
GIEPLISFKDVPSSEKMNLFISKLSLCCVDFDFRDPTKNVAEKELKRATLFELLDFVSAN
PPKFSEPAILALCKTCAVNLFRVFPPNYRSNSSQTSENDDDEPTFDPAWPHLQIVYDLLL
KFVTSSSLEAKVAKKYINHQFILKLLDLFDSEDPRERDCLKAILHRIYGKFMVHRPYIRK
SISNMFYRVVFESEKHNGIAELLEIFGSVVTGFALPLKEEHKIFLSRTLIPLHKPKSLGI
YFQQLSYCINQFIEKDPKLASTVIRGLLKYWPITSTQKEVMFLSELEEILEVINMAEFQK
VMVPLFWRIGCCINSYHFQVAERALFLWNNDQIVNLIAHNRHVILPIIFPAVESNAQNHW
NHAVQNLSLNVRRMFSEMDDVLFLACHSHYKEEQEKINLESEKRKEAWEQLETAASLRPP
VAGNIAVLVMPLATSITC*

Transcript Sequence

Transcript ID

PGSC0003DMT400067211
Transcript Infomation

pacid=37450876 locus=PGSC0003DMG400026132 ID=PGSC0003DMT400067211.v4.03 annot-version=v4.03
Sequence

ATGTGGAAGCATTTTCTGAGTAAGCTTCCGAAGAAATCACTGAAATCTGAGTCAGTAGAC
TTAGGAAGAGGCAATTCGGACTCACACAGCCCGAATGCAAGCTCAAATTTAGGTCCTGGA
AGGCCTAATAGTGTTCCAAGGAGGACTTCCTCAGTTGTGTTCCCAGCAAGTGTGATTGCA
GGGATTGAGCCTTTGATTTCCTTCAAAGATGTTCCCAGCTCTGAAAAGATGAATCTTTTT
ATCAGTAAGTTAAGTCTCTGCTGTGTAGACTTTGATTTCAGGGACCCAACTAAGAATGTA
GCAGAAAAGGAACTAAAAAGGGCTACATTGTTTGAGCTTTTGGATTTTGTATCTGCTAAT
CCACCCAAATTTTCAGAACCTGCAATTCTTGCATTGTGTAAAACATGTGCTGTTAATTTG
TTTCGGGTTTTCCCTCCTAATTATCGGTCTAATAGTAGCCAGACCAGCGAAAATGATGAT
GATGAGCCTACTTTTGACCCTGCCTGGCCTCACTTGCAAATTGTGTATGATCTGTTGCTC
AAGTTTGTAACATCTTCTTCTCTAGAAGCTAAGGTTGCAAAGAAGTATATAAACCATCAG
TTCATCTTGAAATTACTTGACTTGTTTGATTCTGAAGATCCAAGGGAAAGAGATTGTTTG
AAAGCTATTTTGCATAGGATTTATGGCAAGTTCATGGTTCATAGACCTTACATAAGGAAG
AGTATAAGCAATATGTTTTACCGCGTTGTGTTTGAGTCTGAGAAACATAATGGGATTGCT
GAACTTTTGGAGATTTTCGGAAGTGTGGTGACAGGGTTTGCTCTGCCATTGAAAGAGGAG
CATAAGATCTTTTTGTCAAGGACCTTGATTCCTTTGCACAAGCCAAAATCCTTGGGGATT
TACTTTCAACAGTTATCATATTGCATTAACCAGTTCATAGAGAAAGATCCCAAATTGGCT
AGCACTGTGATTAGGGGTTTGTTGAAGTACTGGCCTATCACAAGTACCCAAAAGGAGGTG
ATGTTTTTGAGTGAGCTGGAAGAAATTTTGGAAGTTATTAACATGGCTGAGTTCCAAAAA
GTGATGGTTCCCTTGTTCTGGCGGATCGGTTGCTGCATCAATAGTTACCATTTTCAGGTT
GCTGAAAGGGCTCTGTTCCTTTGGAATAATGACCAAATTGTCAATTTGATTGCACATAAC
CGGCATGTGATTCTCCCGATTATATTCCCAGCTGTGGAAAGCAATGCTCAGAACCACTGG
AATCATGCTGTGCAGAACTTGAGTCTAAACGTAAGAAGGATGTTCTCCGAAATGGATGAT
GTGCTTTTCCTTGCTTGCCATTCGCATTACAAGGAAGAACAGGAAAAAATAAACTTGGAA
TCTGAGAAACGGAAGGAAGCATGGGAACAGCTGGAGACTGCAGCTAGTCTACGTCCACCT
GTAGCTGGAAACATTGCTGTCCTGGTAATGCCTTTAGCAACTTCAATCACTTGCTAA