Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400067143
CDS Infomation

pacid=37452354 polypeptide=PGSC0003DMP400045295 locus=PGSC0003DMG400026101 ID=PGSC0003DMT400067143.v4.03 annot-version=v4.03
Sequence

ATGGGGAAGCCAACTGGGAAGACGAAAAGTAATGTAAAATCAAAGTCAAATGATGGAAAT
GTGAAGCATAAATCAAAAGCATTTGATGAGGACACAGCTGTGTTTATCAAGATGTCTAAA
GACCTGAAGGAAGAAGGGAACAGGTTCTTTCAGAAACGCGATCACGAGGGAGCCATGTTG
AAGTATGAGAAGGCACTCAAATTGCTTCCTAGGAACCATATTGATGTTGCCTATTTGCAT
AGCAACTTGGCTAGTTGCTACATGCAAATGGGGCGTAGCGAGTTTCCAAGAGCTATAAAT
GAATGTAACTTGGCACTTGAAGTTGCTCCCAAGTATAGCAAAGCTTTGTTGAAGAGAGCA
AAGTGTTATGAATCATTGAATAGGCTTGATTTAGCTTTAAGAGATGTGAACCATGTCTTG
AGTATTGAACCTAACAATTTGACTGCTTTAGAGATTGCAGACAAGGTTAAAAAGGAAATA
GAAGAAATACTTAAAGTTGAAAATAAAAAGTTAGTCTTACCCCTTCCAGAATCTGCCAAT
GTTGTGAAGGATAACATGAAAAAGGAGAAGAAGAACAATAAATTTGATAGAAAGAGGATA
GTTGAGATTAAGGAAACGAAGATTGATGGAGTCGAAGAAAAGAAGGCCGAGGACAAGGTG
GTAGTGGAGGAGAAGAGAACCGTCCAGGGAGAAAAAACAATGACAAGAACAGTGAAGTTG
GTTCTTGGAGAGGATATAAGATGGGCACAGTTACCAGTTGGTTGCAGTATTCGACTTGTG
AGAGACATAGTTCTAGATCGATTTCCAAATTTGAAGGGCGCACTTATCAAGTACAGGGAT
CAAGAAGGTGATTTGGTAACTATTACAACTACTGATGAGCTCAGGTTGGCTGAATCATCT
GTTGATCTTCAAGGTTCTTTAAGACTCTACATCAAAGAAGTTAGTCCAGATAAAGAACCT
ATGTATTTGAGGGTTGATGAAGATGAGAAATCGAGCATCTGCAGATCAACTATAGTAAAA
AAGGATGGGGAACTGAATGAAGGGCCAATTTGCCCTGAGAACTGGTTTGTCCAATTCACA
AGGCTATTCAAGAACCATGTTGGAGTTGATTGTGACTCGTATCTGGATCTTCACGAGACA
GGAATGAAATTATATTCAGAAGCTATGGAGGACACTGTTACAAATGAAGAAGCAGAAGGG
CTTTTTGACATTGCTTCAGCTCAGTTCCAAGAGATGGCAGCTTTGTCTTTGTTTAACTGG
GGAAATGTACACATGTCTAGAGCAAGAAAAGAAGTATTTTTCACAGAAGAGGGTTCTGGG
GAGACGGTGTCGGAGCAGGTTAGATCTGCATATGAATGGGCAGAAAAAGAATATGAAACT
GCAGAAATGAGGTATGAAGAAGCTCTTAGAGTCAAGCCAGATTTCTACGAAAGCCTTCTT
GCACTCGGTCAGCAGCAGTTTGAACAAGCAAAACTCTCATGGTACTATTTGGTTGGGAGT
AAAGTTGAATTAGAGACAGGGACATGTGCAGAGATCTTGGAGCTATACAACAAGGCTGAG
GATAGCATTGACAGAGGGATGGAAATGTGGGAAGAGATGGAAGAACAACATCTAAATGGA
CTCTCAAAATATGAGGAATATAAAGCTCAATTGTACAAAAGGGGGTTGGAGGGTATACTT
AAAGATAAATCATCTGAAGAAACTAAAGAGCAGACTGAAAACATGAGGTCTCAGATTTAC
CTGTTATGGGGAACCATGCTCTACGAACGTTCCGTGGTGGAATTTAAGATAGGATTACCA
ACCTGGGAAGAATGTCTAGATGTTGCAGTAGAAAAGTTTGAACTAGCTGGAGCATCACAT
TCTGATATTGCAGTCATGATAAAGAACCACTGTTCCAATGAAACTGCTCTCGAAGGGTTC
AAAGTTGATGAAATTGTACAGGCATGGAGTGAGATGTATGATACAAACAGGTGGCAGACT
GGGGTGCCAACTTTCAGGCTAGAACCATTGTTCCGCCGTCGAGTTTCAAGCCTTCATTCT
ATACTGGAAAATATTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400045295
PEP Infomation

pacid=37452354 transcript=PGSC0003DMT400067143 locus=PGSC0003DMG400026101 ID=PGSC0003DMT400067143.v4.03 annot-version=v4.03
Sequence

MGKPTGKTKSNVKSKSNDGNVKHKSKAFDEDTAVFIKMSKDLKEEGNRFFQKRDHEGAML
KYEKALKLLPRNHIDVAYLHSNLASCYMQMGRSEFPRAINECNLALEVAPKYSKALLKRA
KCYESLNRLDLALRDVNHVLSIEPNNLTALEIADKVKKEIEEILKVENKKLVLPLPESAN
VVKDNMKKEKKNNKFDRKRIVEIKETKIDGVEEKKAEDKVVVEEKRTVQGEKTMTRTVKL
VLGEDIRWAQLPVGCSIRLVRDIVLDRFPNLKGALIKYRDQEGDLVTITTTDELRLAESS
VDLQGSLRLYIKEVSPDKEPMYLRVDEDEKSSICRSTIVKKDGELNEGPICPENWFVQFT
RLFKNHVGVDCDSYLDLHETGMKLYSEAMEDTVTNEEAEGLFDIASAQFQEMAALSLFNW
GNVHMSRARKEVFFTEEGSGETVSEQVRSAYEWAEKEYETAEMRYEEALRVKPDFYESLL
ALGQQQFEQAKLSWYYLVGSKVELETGTCAEILELYNKAEDSIDRGMEMWEEMEEQHLNG
LSKYEEYKAQLYKRGLEGILKDKSSEETKEQTENMRSQIYLLWGTMLYERSVVEFKIGLP
TWEECLDVAVEKFELAGASHSDIAVMIKNHCSNETALEGFKVDEIVQAWSEMYDTNRWQT
GVPTFRLEPLFRRRVSSLHSILENI*

Transcript Sequence

Transcript ID

PGSC0003DMT400067143
Transcript Infomation

pacid=37452354 locus=PGSC0003DMG400026101 ID=PGSC0003DMT400067143.v4.03 annot-version=v4.03
Sequence

ATGGGGAAGCCAACTGGGAAGACGAAAAGTAATGTAAAATCAAAGTCAAATGATGGAAAT
GTGAAGCATAAATCAAAAGCATTTGATGAGGACACAGCTGTGTTTATCAAGATGTCTAAA
GACCTGAAGGAAGAAGGGAACAGGTTCTTTCAGAAACGCGATCACGAGGGAGCCATGTTG
AAGTATGAGAAGGCACTCAAATTGCTTCCTAGGAACCATATTGATGTTGCCTATTTGCAT
AGCAACTTGGCTAGTTGCTACATGCAAATGGGGCGTAGCGAGTTTCCAAGAGCTATAAAT
GAATGTAACTTGGCACTTGAAGTTGCTCCCAAGTATAGCAAAGCTTTGTTGAAGAGAGCA
AAGTGTTATGAATCATTGAATAGGCTTGATTTAGCTTTAAGAGATGTGAACCATGTCTTG
AGTATTGAACCTAACAATTTGACTGCTTTAGAGATTGCAGACAAGGTTAAAAAGGAAATA
GAAGAAATACTTAAAGTTGAAAATAAAAAGTTAGTCTTACCCCTTCCAGAATCTGCCAAT
GTTGTGAAGGATAACATGAAAAAGGAGAAGAAGAACAATAAATTTGATAGAAAGAGGATA
GTTGAGATTAAGGAAACGAAGATTGATGGAGTCGAAGAAAAGAAGGCCGAGGACAAGGTG
GTAGTGGAGGAGAAGAGAACCGTCCAGGGAGAAAAAACAATGACAAGAACAGTGAAGTTG
GTTCTTGGAGAGGATATAAGATGGGCACAGTTACCAGTTGGTTGCAGTATTCGACTTGTG
AGAGACATAGTTCTAGATCGATTTCCAAATTTGAAGGGCGCACTTATCAAGTACAGGGAT
CAAGAAGGTGATTTGGTAACTATTACAACTACTGATGAGCTCAGGTTGGCTGAATCATCT
GTTGATCTTCAAGGTTCTTTAAGACTCTACATCAAAGAAGTTAGTCCAGATAAAGAACCT
ATGTATTTGAGGGTTGATGAAGATGAGAAATCGAGCATCTGCAGATCAACTATAGTAAAA
AAGGATGGGGAACTGAATGAAGGGCCAATTTGCCCTGAGAACTGGTTTGTCCAATTCACA
AGGCTATTCAAGAACCATGTTGGAGTTGATTGTGACTCGTATCTGGATCTTCACGAGACA
GGAATGAAATTATATTCAGAAGCTATGGAGGACACTGTTACAAATGAAGAAGCAGAAGGG
CTTTTTGACATTGCTTCAGCTCAGTTCCAAGAGATGGCAGCTTTGTCTTTGTTTAACTGG
GGAAATGTACACATGTCTAGAGCAAGAAAAGAAGTATTTTTCACAGAAGAGGGTTCTGGG
GAGACGGTGTCGGAGCAGGTTAGATCTGCATATGAATGGGCAGAAAAAGAATATGAAACT
GCAGAAATGAGGTATGAAGAAGCTCTTAGAGTCAAGCCAGATTTCTACGAAAGCCTTCTT
GCACTCGGTCAGCAGCAGTTTGAACAAGCAAAACTCTCATGGTACTATTTGGTTGGGAGT
AAAGTTGAATTAGAGACAGGGACATGTGCAGAGATCTTGGAGCTATACAACAAGGCTGAG
GATAGCATTGACAGAGGGATGGAAATGTGGGAAGAGATGGAAGAACAACATCTAAATGGA
CTCTCAAAATATGAGGAATATAAAGCTCAATTGTACAAAAGGGGGTTGGAGGGTATACTT
AAAGATAAATCATCTGAAGAAACTAAAGAGCAGACTGAAAACATGAGGTCTCAGATTTAC
CTGTTATGGGGAACCATGCTCTACGAACGTTCCGTGGTGGAATTTAAGATAGGATTACCA
ACCTGGGAAGAATGTCTAGATGTTGCAGTAGAAAAGTTTGAACTAGCTGGAGCATCACAT
TCTGATATTGCAGTCATGATAAAGAACCACTGTTCCAATGAAACTGCTCTCGAAGGGTTC
AAAGTTGATGAAATTGTACAGGCATGGAGTGAGATGTATGATACAAACAGGTGGCAGACT
GGGGTGCCAACTTTCAGGCTAGAACCATTGTTCCGCCGTCGAGTTTCAAGCCTTCATTCT
ATACTGGAAAATATTTGA