Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400067126
CDS Infomation

pacid=37453211 polypeptide=PGSC0003DMP400045281 locus=PGSC0003DMG400026096 ID=PGSC0003DMT400067126.v4.03 annot-version=v4.03
Sequence

ATGGCGGGGTTATTGTGGAAGAGAGGCACAACTCTTGGTCAAGGTGGATTCGGTGTTGTC
TCGTTAGCTTCTACGTCTAACGCACTATTTCGTGGTGTTACTCTTCCATCTCTCATCGCC
CTCAAATCATGCAACTACAGTGCTTCTCAATCGTTGAAAGAAGAAGTCGAAATCCTCCGA
ATGTTCAAACATTCACCTTACATTGTTCACTGTTTCGGAGCTAATGTCTCTTTTGAAGAT
AACGTCAATCTTTACAACTTATTGCTCGAGTATGCTTCCGGAGGAAGCCTTGCTGATCGT
CTTCAGAACTGCAATTCACTGTCGGAGTCTGAAGTTAAGAAACACACGAAGAATGTTCTT
TTAGGGCTCAGTTGCATTCACAACAATGGAATTATTCACTGCGACATCAAGCCTGGCAAT
ATTCTCCTTGTGGGCAGGGATAAAACTGCCAAGATCGCTGATTTTGGGCTCTCCGTGAGC
TTGGAACAGGGCTTGAACCAAAAACAGGGAGTTATCAGGGGAACAGAAAGATATATGGCA
CCTGAATCCGTGATTAACACTGAGTATACCTCACAAGTTGATATTTGGGCTCTTGGCTGT
ACTGTCTATGAGCTGATTACGGGGACACCGCTGTGGGAAGACGCAGATGGTGATGATGTG
TTGGACAAAATCGAGTTTGAGGAACCAAAGTTTCAGAATTCAAAGTTGTCAAATGAGGCT
CAAAATTTTCTGGAAAAATGTCTTGTGAAGAATCCGAGCACGCGTTGGACTGCGGACATG
CTCTTGAACCATACTTTTCTGCAGAATTCATCCAAAGTAGCCAACACAGCAAAGACAAGG
AAGAAGAAAAGTGATTCAATGTCCCTTCTACACAAACCAATCCAGAAGATAACATTCAAG
ATCGGCCATCATAAATTCTCGAGGCAATTGTTGGATCCAAAGCCCCTTCTAGACAAACCA
ATCAAGAAGATAACATTCAAGATCGGCAATCATAAATTCGTGAGGCAATTGACAGATCTG
AAGGAAGTAGAGAATGAAACTTGTGGAAGGGTACTGAGTACTGACAATAGATAG

Peptide Sequence

PEP ID

PGSC0003DMP400045281
PEP Infomation

pacid=37453211 transcript=PGSC0003DMT400067126 locus=PGSC0003DMG400026096 ID=PGSC0003DMT400067126.v4.03 annot-version=v4.03
Sequence

MAGLLWKRGTTLGQGGFGVVSLASTSNALFRGVTLPSLIALKSCNYSASQSLKEEVEILR
MFKHSPYIVHCFGANVSFEDNVNLYNLLLEYASGGSLADRLQNCNSLSESEVKKHTKNVL
LGLSCIHNNGIIHCDIKPGNILLVGRDKTAKIADFGLSVSLEQGLNQKQGVIRGTERYMA
PESVINTEYTSQVDIWALGCTVYELITGTPLWEDADGDDVLDKIEFEEPKFQNSKLSNEA
QNFLEKCLVKNPSTRWTADMLLNHTFLQNSSKVANTAKTRKKKSDSMSLLHKPIQKITFK
IGHHKFSRQLLDPKPLLDKPIKKITFKIGNHKFVRQLTDLKEVENETCGRVLSTDNR*

Transcript Sequence

Transcript ID

PGSC0003DMT400067126
Transcript Infomation

pacid=37453211 locus=PGSC0003DMG400026096 ID=PGSC0003DMT400067126.v4.03 annot-version=v4.03
Sequence

ATGGCGGGGTTATTGTGGAAGAGAGGCACAACTCTTGGTCAAGGTGGATTCGGTGTTGTC
TCGTTAGCTTCTACGTCTAACGCACTATTTCGTGGTGTTACTCTTCCATCTCTCATCGCC
CTCAAATCATGCAACTACAGTGCTTCTCAATCGTTGAAAGAAGAAGTCGAAATCCTCCGA
ATGTTCAAACATTCACCTTACATTGTTCACTGTTTCGGAGCTAATGTCTCTTTTGAAGAT
AACGTCAATCTTTACAACTTATTGCTCGAGTATGCTTCCGGAGGAAGCCTTGCTGATCGT
CTTCAGAACTGCAATTCACTGTCGGAGTCTGAAGTTAAGAAACACACGAAGAATGTTCTT
TTAGGGCTCAGTTGCATTCACAACAATGGAATTATTCACTGCGACATCAAGCCTGGCAAT
ATTCTCCTTGTGGGCAGGGATAAAACTGCCAAGATCGCTGATTTTGGGCTCTCCGTGAGC
TTGGAACAGGGCTTGAACCAAAAACAGGGAGTTATCAGGGGAACAGAAAGATATATGGCA
CCTGAATCCGTGATTAACACTGAGTATACCTCACAAGTTGATATTTGGGCTCTTGGCTGT
ACTGTCTATGAGCTGATTACGGGGACACCGCTGTGGGAAGACGCAGATGGTGATGATGTG
TTGGACAAAATCGAGTTTGAGGAACCAAAGTTTCAGAATTCAAAGTTGTCAAATGAGGCT
CAAAATTTTCTGGAAAAATGTCTTGTGAAGAATCCGAGCACGCGTTGGACTGCGGACATG
CTCTTGAACCATACTTTTCTGCAGAATTCATCCAAAGTAGCCAACACAGCAAAGACAAGG
AAGAAGAAAAGTGATTCAATGTCCCTTCTACACAAACCAATCCAGAAGATAACATTCAAG
ATCGGCCATCATAAATTCTCGAGGCAATTGTTGGATCCAAAGCCCCTTCTAGACAAACCA
ATCAAGAAGATAACATTCAAGATCGGCAATCATAAATTCGTGAGGCAATTGACAGATCTG
AAGGAAGTAGAGAATGAAACTTGTGGAAGGGTACTGAGTACTGACAATAGATAG