Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400067093
CDS Infomation

pacid=37452530 polypeptide=PGSC0003DMP400045255 locus=PGSC0003DMG400026081 ID=PGSC0003DMT400067093.v4.03 annot-version=v4.03
Sequence

ATGGAACAACAGGCTAATCAAAGCAGTGATAATCATGATGTTACTGGAATAAAAGAATGG
GATCCAAGAGCCATGCTTAGAAGTATGTCTTTTCTTGAACAAAAGATTCATCAACTCCGG
GAGTTGGTGCGTATAATTGTTGACCACAGAAGTCTAGCTGGGATTCAGGGAAGTGACCTT
TCAATTCAGCAGCAACAGCTAATAACAACTGATCTTACCTCTATTATTATTCAATTGATA
TCAACTGCAGGGAGTCTTCTTCCAACCGTGAAGCATCAAGCGAATCCACCTACCAAGCAA
CTCGAGCAGTTTGGTGGTGCCTCCGTTCCTTCTGAAACAGGTACTAATGTCGGTGCTCTG
ACATGTAATGTTAATGCAACTAAGGCGAAAGATCAGACCAACCATGTTGATCAAATGGGA
GATTGTTCTGTTGATGAACATGAGGCGAAAGATGAAGATGAACCCCATGAGGAAGAGAAC
CTCCCTCCTGGTTCCTACGAGATTCTGCAGCTGGAGAAAGAGGAAATTCTTGCACCTCAC
ACTCACTTTTGCACAATTTGTGGGAAGGGATTTAAGAGAGATGCCAATTTGCGGATGCAC
ATGAGGGGTCATGGGGATGAATACAAAACTTCAGCTGCTCTTGCAAAGCCTCACAAGGAT
TCCAGCTCTGGGACGACGCTTATTAAAAGGTATTCCTGTCCTTGTGTTGGTTGCAAGCGC
AATAAAGAGCACAAAAAGTTTCAGCCACTAAAGAGTATCTTATGTGTGAAAAACCATTAC
AGAAGAACCCACTGTGAGAAAAGATATGCTTGTAGTAGGTGCAATTTGAAGAAATTTTCA
GTTATTGCAGATCTTAGAACACATGAGAAACATTGTGGTAAAGATAAATGGCTTTGTTCT
TGTGGAACAACCTTTTCCAGGAAAGACAAGCTTTTCGGGCACATTTCCCTTTTCCAAGGA
CACACACCTGCAATTCCTCTAGATGAAACCAAAGGTTTTGCTCCGACATCCGATCAAGGC
CAAACCAATGATGCAACTACAAAGGCTGGAAATATAGATTTTGAGGTAAATGTTCAGAAT
GACAGTGGGTTTCAAAATACGATGAATGTAAAAGGGAGTACGGATAATCCTGACAGTTAT
TTCTCATCTTTGAACTTTGAAACTAGCAAGCTTAACGAACTGCAGGAGTTTCCTCAACCA
CCATTTGAGGACCAAGAAAACTCATTCTCTTTTCTACTGTCAGGTTCATGTAATTACCCC
CGTAAGGCTGGAAAAAACATAGGTTCTACTACACTGGAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400045255
PEP Infomation

pacid=37452530 transcript=PGSC0003DMT400067093 locus=PGSC0003DMG400026081 ID=PGSC0003DMT400067093.v4.03 annot-version=v4.03
Sequence

MEQQANQSSDNHDVTGIKEWDPRAMLRSMSFLEQKIHQLRELVRIIVDHRSLAGIQGSDL
SIQQQQLITTDLTSIIIQLISTAGSLLPTVKHQANPPTKQLEQFGGASVPSETGTNVGAL
TCNVNATKAKDQTNHVDQMGDCSVDEHEAKDEDEPHEEENLPPGSYEILQLEKEEILAPH
THFCTICGKGFKRDANLRMHMRGHGDEYKTSAALAKPHKDSSSGTTLIKRYSCPCVGCKR
NKEHKKFQPLKSILCVKNHYRRTHCEKRYACSRCNLKKFSVIADLRTHEKHCGKDKWLCS
CGTTFSRKDKLFGHISLFQGHTPAIPLDETKGFAPTSDQGQTNDATTKAGNIDFEVNVQN
DSGFQNTMNVKGSTDNPDSYFSSLNFETSKLNELQEFPQPPFEDQENSFSFLLSGSCNYP
RKAGKNIGSTTLE*

Transcript Sequence

Transcript ID

PGSC0003DMT400067093
Transcript Infomation

pacid=37452530 locus=PGSC0003DMG400026081 ID=PGSC0003DMT400067093.v4.03 annot-version=v4.03
Sequence

ATGGAACAACAGGCTAATCAAAGCAGTGATAATCATGATGTTACTGGAATAAAAGAATGG
GATCCAAGAGCCATGCTTAGAAGTATGTCTTTTCTTGAACAAAAGATTCATCAACTCCGG
GAGTTGGTGCGTATAATTGTTGACCACAGAAGTCTAGCTGGGATTCAGGGAAGTGACCTT
TCAATTCAGCAGCAACAGCTAATAACAACTGATCTTACCTCTATTATTATTCAATTGATA
TCAACTGCAGGGAGTCTTCTTCCAACCGTGAAGCATCAAGCGAATCCACCTACCAAGCAA
CTCGAGCAGTTTGGTGGTGCCTCCGTTCCTTCTGAAACAGGTACTAATGTCGGTGCTCTG
ACATGTAATGTTAATGCAACTAAGGCGAAAGATCAGACCAACCATGTTGATCAAATGGGA
GATTGTTCTGTTGATGAACATGAGGCGAAAGATGAAGATGAACCCCATGAGGAAGAGAAC
CTCCCTCCTGGTTCCTACGAGATTCTGCAGCTGGAGAAAGAGGAAATTCTTGCACCTCAC
ACTCACTTTTGCACAATTTGTGGGAAGGGATTTAAGAGAGATGCCAATTTGCGGATGCAC
ATGAGGGGTCATGGGGATGAATACAAAACTTCAGCTGCTCTTGCAAAGCCTCACAAGGAT
TCCAGCTCTGGGACGACGCTTATTAAAAGGTATTCCTGTCCTTGTGTTGGTTGCAAGCGC
AATAAAGAGCACAAAAAGTTTCAGCCACTAAAGAGTATCTTATGTGTGAAAAACCATTAC
AGAAGAACCCACTGTGAGAAAAGATATGCTTGTAGTAGGTGCAATTTGAAGAAATTTTCA
GTTATTGCAGATCTTAGAACACATGAGAAACATTGTGGTAAAGATAAATGGCTTTGTTCT
TGTGGAACAACCTTTTCCAGGAAAGACAAGCTTTTCGGGCACATTTCCCTTTTCCAAGGA
CACACACCTGCAATTCCTCTAGATGAAACCAAAGGTTTTGCTCCGACATCCGATCAAGGC
CAAACCAATGATGCAACTACAAAGGCTGGAAATATAGATTTTGAGGTAAATGTTCAGAAT
GACAGTGGGTTTCAAAATACGATGAATGTAAAAGGGAGTACGGATAATCCTGACAGTTAT
TTCTCATCTTTGAACTTTGAAACTAGCAAGCTTAACGAACTGCAGGAGTTTCCTCAACCA
CCATTTGAGGACCAAGAAAACTCATTCTCTTTTCTACTGTCAGGTTCATGTAATTACCCC
CGTAAGGCTGGAAAAAACATAGGTTCTACTACACTGGAATAG