Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400067064
CDS Infomation

pacid=37452940 polypeptide=PGSC0003DMP400045233 locus=PGSC0003DMG400026068 ID=PGSC0003DMT400067064.v4.03 annot-version=v4.03
Sequence

ATGTATCAATGGAGGAAGTTTGAATTTTTTGAGGAGAAATTTTCTGGGAAAGTTCCAGAA
GATATAGCCGGCAAGATCCAATGTTGTTCCAGCGGTAAAGGAAGGATTGTTTTGGGTTGT
GATGACGGCACTGCTTCGTTATTGGATCGAGGGTTGAAGTTCAATTATGGTTTTCAAGCT
CATTCTTCATCTGTCCTCTTCCTCCAACAGCTCAAGCAAAGGAACTTCTTAGTGACTGTT
GGAGAAGATGAGCAAATAGCTTCTCAGCCCCCAGCTGTTTGTCTTAAAATTTTTGATCTT
GACAAGATGGAGCCCGAGGGAACAAGTACATCAAGTCCAGATTGTATTCAAATACTGCGA
GTATTCACCAACCAGTTCCCTGAAGCAAAGATCACGTCGTTTTTGGTGCTGGAAGAGGCT
CCGCCATTATTACTCATAGTTATAGGGCTGGACAATGGTTCCATCTATTGCATTCAAGGA
GATATAGCTCGTGAACGTATCAAGCGCTTTAAGCTTCAGGTGGATAATCATTCAGACAAA
AGCCAATCCTCCGTCACGGGTCTGGGGTTCAGAGTGGATGGTCAGGTGCTTCAGCTGTTT
GCTGTTACCCCAAATACAGTGAACTTGTTCAACATGCATACTCAAGCACCTACCCGGCAG
ACTCTTGATCAGATTGGATCTAGTGTAACTAGTGTTGCAATGACTGATCGATCGGAGTTC
ATTATTGGTCGGCCTGAGGCGATATATTTCTATGAAGTTGATGGTCGTGGTCCTTGTTGG
GCCTTTGAAGGAGAGAAGAAATTCCTTGGGTGGTTTCGTGGATACCTGTTATGTGTTTTT
GATGATCAAAGAACTGGAAAGAACACTTTCAATGTTTATGATCTGAAGAACCGGTTAATT
GCCCACAGTATAGTGGTTAACGAAGTTTCTCAGATGCTTTGTGAATGGGGTAACATAATA
CTTATTTTGGAGGACAAATCAACTTTATGCATTGGGGAGAAAGATATGGAGAGCAAATTG
GATATGCTTTTCAAGAAGAACCTTTATACAGTTGCTATAAATCTCGTCCAAAGCCAGCAA
GCTGATGCTGCTGCAACTGCTGAAGTGCTGAGGAAATATGGCGATCACTTGTACAGTAAA
CAAGACTTTGATGAGGCTATGGCTCAGTATATACACACCATTGGACATCTAGAACCTTCA
TATGTCATACAAAAATTTTTGGATGCACAGAGAATCCACAATCTCACCAATTACTTGGAA
AAGTTGCATGAGAAGGGGCTTGCCTCAAAAGATCATACCACTCTTTTACTAAATTGTTAC
ACCAAATTAAAAGATGTTGAGAAGCTGAATGAGTTCATCAAAAGTGAGGATGGGGTTGGG
GAACAAAAGTTTGATGTTGAGACTGCAATAAGGGTATGCAGAGCTGCCAATTATCATGAG
CATGCCATGTCTGTTGCTAAGAAAGCTGGGAGGCATGAATGGTACCTTAAAATTTTGCTT
GAAGATCTAGGCAGGTATGAAGAAGCTTTACAATATATCAGCAGTCTTGAGTTGAGTCAA
GCTGGGGTGACAGTGAAAGAGTATGGCAAAATTCTTATTGAGCATAAGCCAGCTGAAACA
GTTGAGATACTCATGAGGCTTTGTACAGAGGAATCCGAACTGCCCAAGAAGGGAGCATCG
AGTGGTGCATTTATCTCCATGTTGCCTTCTCCTATTGATTTTCTTAACATTTTTGTCCAT
TATCCTCATGCACTTCTGGAGTTCCTTGAAAAATATACCAGCAAAGTGAAGGATTCATCT
GCTCAAGTGGAAATTCACAACACACTCCTGGAATTGTACTTGTCTCATGACCTGGATTTC
CCATCAATTTCACAATCTAACATAGATGAAGGTGGAAATGATCTAGCATCTTCAAAATCA
GTATCTAATGGGAAGGCTATATCGAACAAGAAAGACGTAAATGATGAGAAAGGTCGTCAA
GAGCGACGTCGGAAGGGGCTGACCTTGCTTAAGAGTGCATGGCCTTCTGAACTAGAACAA
CCACTATATGACGTTGATCTTGCCATAATTTTATGCGAGATGAATGACTTTAAAGAAGGA
TTGTTGTTTCTGTATGAGAAGATGAAACTTTTCAAAGAAGTTATTGCATGCTACATGCAG
GTACATGATCATGAAGGTTTGATTGCATGCTGCAAGAGATTGGGTGATTTGGGTAAGGGG
GGTGACCCTTCTCTTTGGGCAGATTTGTTGAAGTATTTTGGTGAACTTGGAGAAGACTGC
TCAAAAGAAGTCAAAGAAATCCTGACATACATTGAGAGGGATGATATCTTGCCTCCCATT
GTGGTTCTTCAGACACTTGCCAAAAACCCGTGCCTCTCTCTCTCTGTTATCAAAGATTAC
ATAGCTCGAAAGTTAGAACATGAGTCCCAGTTGATTGAAGAAGACCGCAGAGCTATGGAA
AAGTATCAGGAAGAATCATCAACAATGAGAAAAGAGATCCAGGATCTAAGAACAAATGCT
AGAATTTTTCAGCTTAGCAAGTGTACTGCTTGCACATTCACACTAGACCTTCCTGCTGTC
CACTTCATGTGTATGCACTCATTTCATCAGCGCTGCCTTGGCGACAATGAGAAAGAGTGC
CCTGAGTGTGCTCCCGAGTACAGAGCCGTTCTGGAAACAAAGAGAATCTTGGAACAAAGT
TCCAAAAACCCAGACCAGTTCTTCCAACAAGTCAAGAGCTCAAAGGATGGATTTTCCGTA
ATTGCTGATTATTTTGGCAAGGGGATTATCAGCAAAACGAGCAACGGGCCTTCTGAAGCT
ATTGGATCAAACAGTGCTTCTTCCGGCAACGATTTCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400045233
PEP Infomation

pacid=37452940 transcript=PGSC0003DMT400067064 locus=PGSC0003DMG400026068 ID=PGSC0003DMT400067064.v4.03 annot-version=v4.03
Sequence

MYQWRKFEFFEEKFSGKVPEDIAGKIQCCSSGKGRIVLGCDDGTASLLDRGLKFNYGFQA
HSSSVLFLQQLKQRNFLVTVGEDEQIASQPPAVCLKIFDLDKMEPEGTSTSSPDCIQILR
VFTNQFPEAKITSFLVLEEAPPLLLIVIGLDNGSIYCIQGDIARERIKRFKLQVDNHSDK
SQSSVTGLGFRVDGQVLQLFAVTPNTVNLFNMHTQAPTRQTLDQIGSSVTSVAMTDRSEF
IIGRPEAIYFYEVDGRGPCWAFEGEKKFLGWFRGYLLCVFDDQRTGKNTFNVYDLKNRLI
AHSIVVNEVSQMLCEWGNIILILEDKSTLCIGEKDMESKLDMLFKKNLYTVAINLVQSQQ
ADAAATAEVLRKYGDHLYSKQDFDEAMAQYIHTIGHLEPSYVIQKFLDAQRIHNLTNYLE
KLHEKGLASKDHTTLLLNCYTKLKDVEKLNEFIKSEDGVGEQKFDVETAIRVCRAANYHE
HAMSVAKKAGRHEWYLKILLEDLGRYEEALQYISSLELSQAGVTVKEYGKILIEHKPAET
VEILMRLCTEESELPKKGASSGAFISMLPSPIDFLNIFVHYPHALLEFLEKYTSKVKDSS
AQVEIHNTLLELYLSHDLDFPSISQSNIDEGGNDLASSKSVSNGKAISNKKDVNDEKGRQ
ERRRKGLTLLKSAWPSELEQPLYDVDLAIILCEMNDFKEGLLFLYEKMKLFKEVIACYMQ
VHDHEGLIACCKRLGDLGKGGDPSLWADLLKYFGELGEDCSKEVKEILTYIERDDILPPI
VVLQTLAKNPCLSLSVIKDYIARKLEHESQLIEEDRRAMEKYQEESSTMRKEIQDLRTNA
RIFQLSKCTACTFTLDLPAVHFMCMHSFHQRCLGDNEKECPECAPEYRAVLETKRILEQS
SKNPDQFFQQVKSSKDGFSVIADYFGKGIISKTSNGPSEAIGSNSASSGNDF*

Transcript Sequence

Transcript ID

PGSC0003DMT400067064
Transcript Infomation

pacid=37452940 locus=PGSC0003DMG400026068 ID=PGSC0003DMT400067064.v4.03 annot-version=v4.03
Sequence

ATGTATCAATGGAGGAAGTTTGAATTTTTTGAGGAGAAATTTTCTGGGAAAGTTCCAGAA
GATATAGCCGGCAAGATCCAATGTTGTTCCAGCGGTAAAGGAAGGATTGTTTTGGGTTGT
GATGACGGCACTGCTTCGTTATTGGATCGAGGGTTGAAGTTCAATTATGGTTTTCAAGCT
CATTCTTCATCTGTCCTCTTCCTCCAACAGCTCAAGCAAAGGAACTTCTTAGTGACTGTT
GGAGAAGATGAGCAAATAGCTTCTCAGCCCCCAGCTGTTTGTCTTAAAATTTTTGATCTT
GACAAGATGGAGCCCGAGGGAACAAGTACATCAAGTCCAGATTGTATTCAAATACTGCGA
GTATTCACCAACCAGTTCCCTGAAGCAAAGATCACGTCGTTTTTGGTGCTGGAAGAGGCT
CCGCCATTATTACTCATAGTTATAGGGCTGGACAATGGTTCCATCTATTGCATTCAAGGA
GATATAGCTCGTGAACGTATCAAGCGCTTTAAGCTTCAGGTGGATAATCATTCAGACAAA
AGCCAATCCTCCGTCACGGGTCTGGGGTTCAGAGTGGATGGTCAGGTGCTTCAGCTGTTT
GCTGTTACCCCAAATACAGTGAACTTGTTCAACATGCATACTCAAGCACCTACCCGGCAG
ACTCTTGATCAGATTGGATCTAGTGTAACTAGTGTTGCAATGACTGATCGATCGGAGTTC
ATTATTGGTCGGCCTGAGGCGATATATTTCTATGAAGTTGATGGTCGTGGTCCTTGTTGG
GCCTTTGAAGGAGAGAAGAAATTCCTTGGGTGGTTTCGTGGATACCTGTTATGTGTTTTT
GATGATCAAAGAACTGGAAAGAACACTTTCAATGTTTATGATCTGAAGAACCGGTTAATT
GCCCACAGTATAGTGGTTAACGAAGTTTCTCAGATGCTTTGTGAATGGGGTAACATAATA
CTTATTTTGGAGGACAAATCAACTTTATGCATTGGGGAGAAAGATATGGAGAGCAAATTG
GATATGCTTTTCAAGAAGAACCTTTATACAGTTGCTATAAATCTCGTCCAAAGCCAGCAA
GCTGATGCTGCTGCAACTGCTGAAGTGCTGAGGAAATATGGCGATCACTTGTACAGTAAA
CAAGACTTTGATGAGGCTATGGCTCAGTATATACACACCATTGGACATCTAGAACCTTCA
TATGTCATACAAAAATTTTTGGATGCACAGAGAATCCACAATCTCACCAATTACTTGGAA
AAGTTGCATGAGAAGGGGCTTGCCTCAAAAGATCATACCACTCTTTTACTAAATTGTTAC
ACCAAATTAAAAGATGTTGAGAAGCTGAATGAGTTCATCAAAAGTGAGGATGGGGTTGGG
GAACAAAAGTTTGATGTTGAGACTGCAATAAGGGTATGCAGAGCTGCCAATTATCATGAG
CATGCCATGTCTGTTGCTAAGAAAGCTGGGAGGCATGAATGGTACCTTAAAATTTTGCTT
GAAGATCTAGGCAGGTATGAAGAAGCTTTACAATATATCAGCAGTCTTGAGTTGAGTCAA
GCTGGGGTGACAGTGAAAGAGTATGGCAAAATTCTTATTGAGCATAAGCCAGCTGAAACA
GTTGAGATACTCATGAGGCTTTGTACAGAGGAATCCGAACTGCCCAAGAAGGGAGCATCG
AGTGGTGCATTTATCTCCATGTTGCCTTCTCCTATTGATTTTCTTAACATTTTTGTCCAT
TATCCTCATGCACTTCTGGAGTTCCTTGAAAAATATACCAGCAAAGTGAAGGATTCATCT
GCTCAAGTGGAAATTCACAACACACTCCTGGAATTGTACTTGTCTCATGACCTGGATTTC
CCATCAATTTCACAATCTAACATAGATGAAGGTGGAAATGATCTAGCATCTTCAAAATCA
GTATCTAATGGGAAGGCTATATCGAACAAGAAAGACGTAAATGATGAGAAAGGTCGTCAA
GAGCGACGTCGGAAGGGGCTGACCTTGCTTAAGAGTGCATGGCCTTCTGAACTAGAACAA
CCACTATATGACGTTGATCTTGCCATAATTTTATGCGAGATGAATGACTTTAAAGAAGGA
TTGTTGTTTCTGTATGAGAAGATGAAACTTTTCAAAGAAGTTATTGCATGCTACATGCAG
GTACATGATCATGAAGGTTTGATTGCATGCTGCAAGAGATTGGGTGATTTGGGTAAGGGG
GGTGACCCTTCTCTTTGGGCAGATTTGTTGAAGTATTTTGGTGAACTTGGAGAAGACTGC
TCAAAAGAAGTCAAAGAAATCCTGACATACATTGAGAGGGATGATATCTTGCCTCCCATT
GTGGTTCTTCAGACACTTGCCAAAAACCCGTGCCTCTCTCTCTCTGTTATCAAAGATTAC
ATAGCTCGAAAGTTAGAACATGAGTCCCAGTTGATTGAAGAAGACCGCAGAGCTATGGAA
AAGTATCAGGAAGAATCATCAACAATGAGAAAAGAGATCCAGGATCTAAGAACAAATGCT
AGAATTTTTCAGCTTAGCAAGTGTACTGCTTGCACATTCACACTAGACCTTCCTGCTGTC
CACTTCATGTGTATGCACTCATTTCATCAGCGCTGCCTTGGCGACAATGAGAAAGAGTGC
CCTGAGTGTGCTCCCGAGTACAGAGCCGTTCTGGAAACAAAGAGAATCTTGGAACAAAGT
TCCAAAAACCCAGACCAGTTCTTCCAACAAGTCAAGAGCTCAAAGGATGGATTTTCCGTA
ATTGCTGATTATTTTGGCAAGGGGATTATCAGCAAAACGAGCAACGGGCCTTCTGAAGCT
ATTGGATCAAACAGTGCTTCTTCCGGCAACGATTTCTAG