Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400067034
CDS Infomation

pacid=37439024 polypeptide=PGSC0003DMP400045211 locus=PGSC0003DMG400026052 ID=PGSC0003DMT400067034.v4.03 annot-version=v4.03
Sequence

ATGGAAAGGATACCTGAAGTTAGAGAGTCAACTAGGCAGTTCCCTATAGGGGCTAAGGTG
GCACATACTTTCTCTACCTCCAAGAAGGAGGTCGGTATTAGAGGCTTTCGAGATTTTGAC
TTGGCTGTTCCAATAGAAACATGGAAAGGAAAGACCTCCTATCAGGAGGAAGAAGACCTC
ATGGTCGATGCTGGTACAATAAAGCGTAGTGATGATTCACTTGAAGATAGTGGCTCTACA
TCATTTCATGGGGCGAGTCATCCTCCGGAACCTGTTGATACAGACCTAATGAGACCAGTG
TATGTACCAATTGGTCAGAAGAAAGGAGATGGGAAATGTCTGGTGAAAAACATATCTTTG
AAGGGTCCTTTCTTGGACGATCTTTCAATCCGGATGCCAAATGTGAAACCAAGCCCATCC
CTTCTTTCACCGGCAGAGAGCTTGGTTGAAGAGCCAAATGATCTAGGTGTAATCTCTTCT
CCATTTACAGTTCCTCGTCCTTCTCAAAACACAGAAACAAGTCTGCTTCCTGATTCCGAA
GAGAAAGAATGTATTTGGGATGCATCTCAGCCTCCAAGTGGAAATGTAAGTCCACTTAGT
AGCATTGATAGTACTGGTGTTGTGAGATCTATGAGTATTGTCAACAGTTGCACAAGCACG
TACAGGAGCGATGGGCTTATGAGTGATGGCATGCTTAGTGTGGACAGAAACTATGAGAGC
ACGAAAGGGAGCATTCGAGGGGATTCACTCGAAAGTGGTAAAACTAGCCTTAGCAGAGCA
AGTGACAGTAGTGGACTTAGTGATGATAGTAATTGGAGTAACATCACTGGCAGTGCCAAT
AAGCCTCACAAAGGAAATGATCCTAGATGGAAGGCTATTCTCGCGATTCGGGCACGTGAT
GGTATATTAGGCATGAGCCACTTTAAGTTACTCAAAAGACTTGGTTGTGGAGACATTGGA
AGTGTTTATCTTTCTGAGCTTAGCGGGACTCGCTGCTATTTTGCAATGAAAGTGATGGAT
AAGGCATCACTTGCAAGCAGGAAGAAATTGACCCGTGCTCAGACAGAAAGAGAAATCCTA
CAGTTATTAGACCATCCATTCTTGCCAACATTGTACACTCATTTTGAGACCGATCGCTTC
TCCTGTTTGGTCATGGAATATTGTCCTGGAGGAGATCTGCATACTCTACGACAGCGACAA
CCTGGGAAGCATTTTTCAGAATATGCTGCAAGGTTTTATGCAGCAGAAGTTCTATTGGCA
CTTGAATATCTACATATGCTTGGTGTAGTGTACAGGGATTTAAAACCTGAAAATGTTCTT
GTGCGTGACGATGGCCACATTATGCTTTCAGATTTTGACCTCTCCTTAAGATGTGCAGTT
TCACCTACGCTCATAAGGACCTCATCTGATGATCCTTCAAAACGAGGAGCTGCATTTTGT
GTGCAGCCAACCTGTATTGAGCCCACAACTGTATGCATGCAACCAGCATGCTTCCTTCCC
CGTTTATTTCCTCAAAAGAGCAAGAAAAAAACACCTAAGCCTCGAGCTGATTCTGGGTTT
CAAGCTAATTCAATGCCTGAGCTAGTTGCGGAACCTACTTCAGCACGGTCAATGTCATTT
GTTGGGACTCATGAATATTTGGCCCCCGAGATTATCAAGGGAGAAGGCCATGGCAGTGCG
GTTGACTGGTGGACATTTGGTATTTTTCTTCATGAACTACTATATGGAAAGACCCCTTTC
AAGGGATCAGGAAACAGGGCAACTCTTTTCAATGTAGTTGGCCAGCAGCTTAGATTTCCA
GATTCTCCTGCAACCAGTTATGCCAGCCGTGATCTGATACGTGGTTTGCTTGTTAAAGAG
CCTCAAAACCGGCTTGGGGTGAAACGAGGAGCAACTGAGATCAAGCAGCATCCTTTCTTT
GAAGGTGTTAATTGGGCTCTGATACGTTGCAGTACACCACCTGAAGTACCAAGACCCGTG
GAGCCGGAGTACCCTGCAAAGTATGGGCAAGTGAACCCTGTTGGGGTTGGCAATACCAGT
AAAAAAGTGGTAGGGGCAGATGCAAAGTCTGGGGGTAAATATCTTGACTTTGAGTTCTTT
TAG

Peptide Sequence

PEP ID

PGSC0003DMP400045211
PEP Infomation

pacid=37439024 transcript=PGSC0003DMT400067034 locus=PGSC0003DMG400026052 ID=PGSC0003DMT400067034.v4.03 annot-version=v4.03
Sequence

MERIPEVRESTRQFPIGAKVAHTFSTSKKEVGIRGFRDFDLAVPIETWKGKTSYQEEEDL
MVDAGTIKRSDDSLEDSGSTSFHGASHPPEPVDTDLMRPVYVPIGQKKGDGKCLVKNISL
KGPFLDDLSIRMPNVKPSPSLLSPAESLVEEPNDLGVISSPFTVPRPSQNTETSLLPDSE
EKECIWDASQPPSGNVSPLSSIDSTGVVRSMSIVNSCTSTYRSDGLMSDGMLSVDRNYES
TKGSIRGDSLESGKTSLSRASDSSGLSDDSNWSNITGSANKPHKGNDPRWKAILAIRARD
GILGMSHFKLLKRLGCGDIGSVYLSELSGTRCYFAMKVMDKASLASRKKLTRAQTEREIL
QLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLA
LEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIRTSSDDPSKRGAAFC
VQPTCIEPTTVCMQPACFLPRLFPQKSKKKTPKPRADSGFQANSMPELVAEPTSARSMSF
VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFP
DSPATSYASRDLIRGLLVKEPQNRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPV
EPEYPAKYGQVNPVGVGNTSKKVVGADAKSGGKYLDFEFF*

Transcript Sequence

Transcript ID

PGSC0003DMT400067034
Transcript Infomation

pacid=37439024 locus=PGSC0003DMG400026052 ID=PGSC0003DMT400067034.v4.03 annot-version=v4.03
Sequence

ATGGAAAGGATACCTGAAGTTAGAGAGTCAACTAGGCAGTTCCCTATAGGGGCTAAGGTG
GCACATACTTTCTCTACCTCCAAGAAGGAGGTCGGTATTAGAGGCTTTCGAGATTTTGAC
TTGGCTGTTCCAATAGAAACATGGAAAGGAAAGACCTCCTATCAGGAGGAAGAAGACCTC
ATGGTCGATGCTGGTACAATAAAGCGTAGTGATGATTCACTTGAAGATAGTGGCTCTACA
TCATTTCATGGGGCGAGTCATCCTCCGGAACCTGTTGATACAGACCTAATGAGACCAGTG
TATGTACCAATTGGTCAGAAGAAAGGAGATGGGAAATGTCTGGTGAAAAACATATCTTTG
AAGGGTCCTTTCTTGGACGATCTTTCAATCCGGATGCCAAATGTGAAACCAAGCCCATCC
CTTCTTTCACCGGCAGAGAGCTTGGTTGAAGAGCCAAATGATCTAGGTGTAATCTCTTCT
CCATTTACAGTTCCTCGTCCTTCTCAAAACACAGAAACAAGTCTGCTTCCTGATTCCGAA
GAGAAAGAATGTATTTGGGATGCATCTCAGCCTCCAAGTGGAAATGTAAGTCCACTTAGT
AGCATTGATAGTACTGGTGTTGTGAGATCTATGAGTATTGTCAACAGTTGCACAAGCACG
TACAGGAGCGATGGGCTTATGAGTGATGGCATGCTTAGTGTGGACAGAAACTATGAGAGC
ACGAAAGGGAGCATTCGAGGGGATTCACTCGAAAGTGGTAAAACTAGCCTTAGCAGAGCA
AGTGACAGTAGTGGACTTAGTGATGATAGTAATTGGAGTAACATCACTGGCAGTGCCAAT
AAGCCTCACAAAGGAAATGATCCTAGATGGAAGGCTATTCTCGCGATTCGGGCACGTGAT
GGTATATTAGGCATGAGCCACTTTAAGTTACTCAAAAGACTTGGTTGTGGAGACATTGGA
AGTGTTTATCTTTCTGAGCTTAGCGGGACTCGCTGCTATTTTGCAATGAAAGTGATGGAT
AAGGCATCACTTGCAAGCAGGAAGAAATTGACCCGTGCTCAGACAGAAAGAGAAATCCTA
CAGTTATTAGACCATCCATTCTTGCCAACATTGTACACTCATTTTGAGACCGATCGCTTC
TCCTGTTTGGTCATGGAATATTGTCCTGGAGGAGATCTGCATACTCTACGACAGCGACAA
CCTGGGAAGCATTTTTCAGAATATGCTGCAAGGTTTTATGCAGCAGAAGTTCTATTGGCA
CTTGAATATCTACATATGCTTGGTGTAGTGTACAGGGATTTAAAACCTGAAAATGTTCTT
GTGCGTGACGATGGCCACATTATGCTTTCAGATTTTGACCTCTCCTTAAGATGTGCAGTT
TCACCTACGCTCATAAGGACCTCATCTGATGATCCTTCAAAACGAGGAGCTGCATTTTGT
GTGCAGCCAACCTGTATTGAGCCCACAACTGTATGCATGCAACCAGCATGCTTCCTTCCC
CGTTTATTTCCTCAAAAGAGCAAGAAAAAAACACCTAAGCCTCGAGCTGATTCTGGGTTT
CAAGCTAATTCAATGCCTGAGCTAGTTGCGGAACCTACTTCAGCACGGTCAATGTCATTT
GTTGGGACTCATGAATATTTGGCCCCCGAGATTATCAAGGGAGAAGGCCATGGCAGTGCG
GTTGACTGGTGGACATTTGGTATTTTTCTTCATGAACTACTATATGGAAAGACCCCTTTC
AAGGGATCAGGAAACAGGGCAACTCTTTTCAATGTAGTTGGCCAGCAGCTTAGATTTCCA
GATTCTCCTGCAACCAGTTATGCCAGCCGTGATCTGATACGTGGTTTGCTTGTTAAAGAG
CCTCAAAACCGGCTTGGGGTGAAACGAGGAGCAACTGAGATCAAGCAGCATCCTTTCTTT
GAAGGTGTTAATTGGGCTCTGATACGTTGCAGTACACCACCTGAAGTACCAAGACCCGTG
GAGCCGGAGTACCCTGCAAAGTATGGGCAAGTGAACCCTGTTGGGGTTGGCAATACCAGT
AAAAAAGTGGTAGGGGCAGATGCAAAGTCTGGGGGTAAATATCTTGACTTTGAGTTCTTT
TAG