Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400066877
CDS Infomation

pacid=37437943 polypeptide=PGSC0003DMP400045099 locus=PGSC0003DMG400025998 ID=PGSC0003DMT400066877.v4.03 annot-version=v4.03
Sequence

ATGGCGGATTTGAACCCCTTTGATTTGCTTGGTGATGATGATAACGATGATCCATCAAAG
CTGATTGCTATTCACCAGCAAAAAGTTGATCCGGCGAAGAGAGCCTCAGCTCCGGCGGCT
AAGAAGCAGCCGGCGAAGCTCCCCACTAAGCCTCCTCCCCCGACTCAAGCTGTCAGGGAG
GCAAAAACAGAATTTGGACGTGGTGGAGGTAGAGGTGGTGGACGTGGCTACAGCCGTGGT
CGTGGTGGAGGTGGGTTCAATAGGGAAGCATCCAACAATGAGAACTTTTCTCGCAACAGA
GAATTTTCAGGTGGTATAGCTGCACCTGAATACATGGAAGGAGGAAGACCCTCCGAAAGA
CGTGGTGGTTATGGTGGACCCCATGCTTTCCGTGGTGGTAGACCAGGTGGTTTTGGTAAT
GAAGAAATGCCCGAGGGGGACCGGCCTCGTAGGACATTTGAACGCCGTAGTGGTACTGGC
CGCGGAAATGAGATAAAGCGTGAAGGTGCTGGCCGAGGAAATTGGGGAACTGAAGCAGAT
GAAGTTACTCAGATGACTGGTGAAGTTGCTGATGAAGGTGAGAAAAATCTGAATGTGGAG
AAACCCTCCACCGAAGAAGAAGCAGGAGACGACAAGAAGGAAAATCCAGCTGCTGAAGCT
GAGGACAAGGAGCCTGAAGATAAGGAGATGACCCTTGAAGAGTATGAGAAGTTGCTAGAA
GAAAAACGGAAGGCTTTGCAGGCGCTTAAGACTGAGGAAAGGAAGGTCGACACCAAAGTA
TTTGAATCCATGCAACAGATTTCAAAGAAACCCAGTGATGAAATCTTTGTCAAATTGGGA
TCCAAGGATAAGAGAAAAGAGTCTGCTGAGAAGGAAGAGAAGGCAAAGAAGGCTGTCAGC
ATTAATGAGTTTTTGAAGCCTGCTGAGGGCGAGAGGTATTATGCACCTGGTGGTCGAGGT
CGAGGGCGTGGCCGCGGTTCTAGAGGTTACAGTGGAGCCAACACAATGAGCAATGTGGAA
GCTGCTCCTCCCATTGAAGATCCAGGTCACTTCCCTACATTGGGTGGCAAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400045099
PEP Infomation

pacid=37437943 transcript=PGSC0003DMT400066877 locus=PGSC0003DMG400025998 ID=PGSC0003DMT400066877.v4.03 annot-version=v4.03
Sequence

MADLNPFDLLGDDDNDDPSKLIAIHQQKVDPAKRASAPAAKKQPAKLPTKPPPPTQAVRE
AKTEFGRGGGRGGGRGYSRGRGGGGFNREASNNENFSRNREFSGGIAAPEYMEGGRPSER
RGGYGGPHAFRGGRPGGFGNEEMPEGDRPRRTFERRSGTGRGNEIKREGAGRGNWGTEAD
EVTQMTGEVADEGEKNLNVEKPSTEEEAGDDKKENPAAEAEDKEPEDKEMTLEEYEKLLE
EKRKALQALKTEERKVDTKVFESMQQISKKPSDEIFVKLGSKDKRKESAEKEEKAKKAVS
INEFLKPAEGERYYAPGGRGRGRGRGSRGYSGANTMSNVEAAPPIEDPGHFPTLGGK*

Transcript Sequence

Transcript ID

PGSC0003DMT400066877
Transcript Infomation

pacid=37437943 locus=PGSC0003DMG400025998 ID=PGSC0003DMT400066877.v4.03 annot-version=v4.03
Sequence

ATGGCGGATTTGAACCCCTTTGATTTGCTTGGTGATGATGATAACGATGATCCATCAAAG
CTGATTGCTATTCACCAGCAAAAAGTTGATCCGGCGAAGAGAGCCTCAGCTCCGGCGGCT
AAGAAGCAGCCGGCGAAGCTCCCCACTAAGCCTCCTCCCCCGACTCAAGCTGTCAGGGAG
GCAAAAACAGAATTTGGACGTGGTGGAGGTAGAGGTGGTGGACGTGGCTACAGCCGTGGT
CGTGGTGGAGGTGGGTTCAATAGGGAAGCATCCAACAATGAGAACTTTTCTCGCAACAGA
GAATTTTCAGGTGGTATAGCTGCACCTGAATACATGGAAGGAGGAAGACCCTCCGAAAGA
CGTGGTGGTTATGGTGGACCCCATGCTTTCCGTGGTGGTAGACCAGGTGGTTTTGGTAAT
GAAGAAATGCCCGAGGGGGACCGGCCTCGTAGGACATTTGAACGCCGTAGTGGTACTGGC
CGCGGAAATGAGATAAAGCGTGAAGGTGCTGGCCGAGGAAATTGGGGAACTGAAGCAGAT
GAAGTTACTCAGATGACTGGTGAAGTTGCTGATGAAGGTGAGAAAAATCTGAATGTGGAG
AAACCCTCCACCGAAGAAGAAGCAGGAGACGACAAGAAGGAAAATCCAGCTGCTGAAGCT
GAGGACAAGGAGCCTGAAGATAAGGAGATGACCCTTGAAGAGTATGAGAAGTTGCTAGAA
GAAAAACGGAAGGCTTTGCAGGCGCTTAAGACTGAGGAAAGGAAGGTCGACACCAAAGTA
TTTGAATCCATGCAACAGATTTCAAAGAAACCCAGTGATGAAATCTTTGTCAAATTGGGA
TCCAAGGATAAGAGAAAAGAGTCTGCTGAGAAGGAAGAGAAGGCAAAGAAGGCTGTCAGC
ATTAATGAGTTTTTGAAGCCTGCTGAGGGCGAGAGGTATTATGCACCTGGTGGTCGAGGT
CGAGGGCGTGGCCGCGGTTCTAGAGGTTACAGTGGAGCCAACACAATGAGCAATGTGGAA
GCTGCTCCTCCCATTGAAGATCCAGGTCACTTCCCTACATTGGGTGGCAAGTGA