Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400066867
CDS Infomation

pacid=37440544 polypeptide=PGSC0003DMP400045092 locus=PGSC0003DMG400025994 ID=PGSC0003DMT400066867.v4.03 annot-version=v4.03
Sequence

ATGGGTTGCGCGGCGTCGAAGCTAGATAACGAAGATACTGTCCGGCGGTGTAAAGACCGC
CGGCGATTGATGAAAGAAGCTGTTTATGCTCGTCATCACTTAGCAGCAGCTCATTCTGAT
TACTGCCGTTCACTTCGTGTTACCGGTTCTGCTTTATCTACCTTTGCCGCCGGTGAACCA
CTTTCTGTTTCTGATCATACTCCAGCTGTTCTCCTCCGTACGTCTTTTTCTACTACTGCT
GCTACTACCATCAAAACCCCTCCACCCCCACCCCCTATTCGTATCCCATCTCCTTCTCCT
TCTCTTCACCCACCACCACCCCCACCGCCGTTTTTTCCGTCGCCGTCACCGACGATAGCT
TCTTCAAAGCTTCCTCATATACTTTCTGCCTCCTCTGTTTCCTCTCATCAGCGTCAGCCC
CCGGTGCAGCAGAAAAAACCCCTGAAGCTTCCACACATTCTTTCTGGGTCAAGTTTGAAT
TCATATAATGAGGATTATACATACGATGCGAAAGCAAATTCGACGTATTCTAGTACTCCT
TCACAAGCTTCCTCTGTTTGGAACTGGGAAAATTTCTACCCTCCTTCCCCTCCAAGTTCA
GAGTACTTCGAACGCGTCCACAATAAGAACAATTTTTCTCGGGAAGCTGATCTGGAGGAT
GATGAGGATGATAAGGCATCAAACTACACATCTCATTCACAATACTCTCAACATCATCAT
CAGCATCAGCACCAACATCATCCTAGTGACCAATCACTTCATGGGAAATCGAACAAGCAA
TTTGACTTTTTCGATACTGATAGCGTTAACGATGAGAAATTGGCAAATGGGTCTGTCCGG
AATCAGAAAAAGGTTGGTGAAAACAAGCAGAACTATGCAGCCCACCATTTGAATAACTGG
GAAAGTGAAGCTGAGAGAGAAGAAGTACAGTGCAGCGAGTGGGGAGATCATGATCATTAC
AGTACTACAACTTCATCTGATGATGATGATGATGAAGAAGAAGAAGTAGAGGAAAAGGAT
GAGATAAGATCTGGGTATGGGCCATCCCGGTCGAATTTCGGGTCTACTGCTTCCGTGAAG
AATGAGGAAGGTTCTAATATTAATGTGAATTCAAAGAATTTCTCAGTGAAGAAATCTGAT
AAGATGTCAGAGGACGGTGGGTCGTCTTCGATGAGTTGGGGGAACGGAAATGGGAAAGTG
GAGATGGTATCTGATAGAAGTATGGTGGTTAGGCACAAGGATCTAGCAGAGATTGTTGCT
GCCATTAAGGAATACTTTGATAAGACTGCTTCTGCTGGTGAGCAGGTGTCTGAGATGTTG
GAGACAGGTCGAGCACAGCTTGACCGGAGCTTTAAGCAGTTGAAGAAAACTGTGTATCAT
TCCAGTGGAGTATTTAGCACCATAAGCTCCACCTGGTCTTCAAAACCTCCATTGGCGGTC
AAGTATCGTTTTGAACCTAGTTCTATTGATGAAGGTGGCCAAAAGAGTCTTTGTTCCACC
TTGGAGCGACTCTTGGCATGGGAAAAGAAACTGTATCAGGAAGTGAAGGCCAGGGAAGGA
GTTAAAATTGAGCATGAAAAGAAGTTAGCAACATTACAGAGTCAGGAAAGCAGAAGTGAT
GACGTAGCCAAGTTGGACAAAACTAAGGCTTCAATAACGAGGTTGCAGTCACTGATGGTG
GTCACATCACAGGCTGTTTCCACCACGTCCTCTGCCATTATTGGTCTAAGAGACTCTGAC
CTTGTCCCACAGCTTGTTGAACTTTGTCATGGATTTATGTACATGTGGAAATCCATGAAC
CAGTTCCATCAAGTTCAGAATGACATTGTGCAGCAGGTGCGTGGCCTCATCAATAGAGAA
ATTAATGGTCAATCGACATCTGACCTACACCGGCAGGCAACACGTGACCTTGAGTCTGCT
GTATCTGCATGGCACTCGAGTTATTGTCGCCTGATAAAATTTCAAAGGGACTTTATCCAG
TCCCTTCATGGTTGGTTCAAGCTCACCCTTGTGTCTGTCAATACTGAGCCAACTAATGGC
AACAGGGAGTTCTCAGATTCATTTATGTTTTGCGATGAATGGAAGCTAGCGCTTGACCGT
ATTCCTGACACTGTTGCATCAGAAGCTATCAAAAGCTTCATAAATGTTGTTCATTCGATA
TATGCGAAACAAACGGAGGAGCTGAAGATAAAAAAGCGGACTGAATCTGCATCGAAGGAG
CTTGAGAAAAAGGCTTCGAGTGTTAGGAGCATTGAAAGGAAGTATTACAATTCTTACTCC
ATGGTTGGCATTGGACTTCCTGATGTGGGACCTGATAATGGTAATGTTTTAGATGCACGG
GACCCTCTTGCTGAGAAAAAGGCTGAGCTTGCAGCTAGCCAACGGCGTGTGGAAGATGAG
ATGGTGAAGCATTCTAAAGCAGTGGAGGTAACCAGAGCAATGACTCTGAACAACATTCAG
ACAGGGCTTCCGGGAGTTTTCCAAGCTATGACCAGCTTTTCTTCCTTAATGACAGAGGCC
CTTGAGGCTGTATGCACCCGTTCTTATTCTATTAAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400045092
PEP Infomation

pacid=37440544 transcript=PGSC0003DMT400066867 locus=PGSC0003DMG400025994 ID=PGSC0003DMT400066867.v4.03 annot-version=v4.03
Sequence

MGCAASKLDNEDTVRRCKDRRRLMKEAVYARHHLAAAHSDYCRSLRVTGSALSTFAAGEP
LSVSDHTPAVLLRTSFSTTAATTIKTPPPPPPIRIPSPSPSLHPPPPPPPFFPSPSPTIA
SSKLPHILSASSVSSHQRQPPVQQKKPLKLPHILSGSSLNSYNEDYTYDAKANSTYSSTP
SQASSVWNWENFYPPSPPSSEYFERVHNKNNFSREADLEDDEDDKASNYTSHSQYSQHHH
QHQHQHHPSDQSLHGKSNKQFDFFDTDSVNDEKLANGSVRNQKKVGENKQNYAAHHLNNW
ESEAEREEVQCSEWGDHDHYSTTTSSDDDDDEEEEVEEKDEIRSGYGPSRSNFGSTASVK
NEEGSNINVNSKNFSVKKSDKMSEDGGSSSMSWGNGNGKVEMVSDRSMVVRHKDLAEIVA
AIKEYFDKTASAGEQVSEMLETGRAQLDRSFKQLKKTVYHSSGVFSTISSTWSSKPPLAV
KYRFEPSSIDEGGQKSLCSTLERLLAWEKKLYQEVKAREGVKIEHEKKLATLQSQESRSD
DVAKLDKTKASITRLQSLMVVTSQAVSTTSSAIIGLRDSDLVPQLVELCHGFMYMWKSMN
QFHQVQNDIVQQVRGLINREINGQSTSDLHRQATRDLESAVSAWHSSYCRLIKFQRDFIQ
SLHGWFKLTLVSVNTEPTNGNREFSDSFMFCDEWKLALDRIPDTVASEAIKSFINVVHSI
YAKQTEELKIKKRTESASKELEKKASSVRSIERKYYNSYSMVGIGLPDVGPDNGNVLDAR
DPLAEKKAELAASQRRVEDEMVKHSKAVEVTRAMTLNNIQTGLPGVFQAMTSFSSLMTEA
LEAVCTRSYSIK*

Transcript Sequence

Transcript ID

PGSC0003DMT400066867
Transcript Infomation

pacid=37440544 locus=PGSC0003DMG400025994 ID=PGSC0003DMT400066867.v4.03 annot-version=v4.03
Sequence

ATGGGTTGCGCGGCGTCGAAGCTAGATAACGAAGATACTGTCCGGCGGTGTAAAGACCGC
CGGCGATTGATGAAAGAAGCTGTTTATGCTCGTCATCACTTAGCAGCAGCTCATTCTGAT
TACTGCCGTTCACTTCGTGTTACCGGTTCTGCTTTATCTACCTTTGCCGCCGGTGAACCA
CTTTCTGTTTCTGATCATACTCCAGCTGTTCTCCTCCGTACGTCTTTTTCTACTACTGCT
GCTACTACCATCAAAACCCCTCCACCCCCACCCCCTATTCGTATCCCATCTCCTTCTCCT
TCTCTTCACCCACCACCACCCCCACCGCCGTTTTTTCCGTCGCCGTCACCGACGATAGCT
TCTTCAAAGCTTCCTCATATACTTTCTGCCTCCTCTGTTTCCTCTCATCAGCGTCAGCCC
CCGGTGCAGCAGAAAAAACCCCTGAAGCTTCCACACATTCTTTCTGGGTCAAGTTTGAAT
TCATATAATGAGGATTATACATACGATGCGAAAGCAAATTCGACGTATTCTAGTACTCCT
TCACAAGCTTCCTCTGTTTGGAACTGGGAAAATTTCTACCCTCCTTCCCCTCCAAGTTCA
GAGTACTTCGAACGCGTCCACAATAAGAACAATTTTTCTCGGGAAGCTGATCTGGAGGAT
GATGAGGATGATAAGGCATCAAACTACACATCTCATTCACAATACTCTCAACATCATCAT
CAGCATCAGCACCAACATCATCCTAGTGACCAATCACTTCATGGGAAATCGAACAAGCAA
TTTGACTTTTTCGATACTGATAGCGTTAACGATGAGAAATTGGCAAATGGGTCTGTCCGG
AATCAGAAAAAGGTTGGTGAAAACAAGCAGAACTATGCAGCCCACCATTTGAATAACTGG
GAAAGTGAAGCTGAGAGAGAAGAAGTACAGTGCAGCGAGTGGGGAGATCATGATCATTAC
AGTACTACAACTTCATCTGATGATGATGATGATGAAGAAGAAGAAGTAGAGGAAAAGGAT
GAGATAAGATCTGGGTATGGGCCATCCCGGTCGAATTTCGGGTCTACTGCTTCCGTGAAG
AATGAGGAAGGTTCTAATATTAATGTGAATTCAAAGAATTTCTCAGTGAAGAAATCTGAT
AAGATGTCAGAGGACGGTGGGTCGTCTTCGATGAGTTGGGGGAACGGAAATGGGAAAGTG
GAGATGGTATCTGATAGAAGTATGGTGGTTAGGCACAAGGATCTAGCAGAGATTGTTGCT
GCCATTAAGGAATACTTTGATAAGACTGCTTCTGCTGGTGAGCAGGTGTCTGAGATGTTG
GAGACAGGTCGAGCACAGCTTGACCGGAGCTTTAAGCAGTTGAAGAAAACTGTGTATCAT
TCCAGTGGAGTATTTAGCACCATAAGCTCCACCTGGTCTTCAAAACCTCCATTGGCGGTC
AAGTATCGTTTTGAACCTAGTTCTATTGATGAAGGTGGCCAAAAGAGTCTTTGTTCCACC
TTGGAGCGACTCTTGGCATGGGAAAAGAAACTGTATCAGGAAGTGAAGGCCAGGGAAGGA
GTTAAAATTGAGCATGAAAAGAAGTTAGCAACATTACAGAGTCAGGAAAGCAGAAGTGAT
GACGTAGCCAAGTTGGACAAAACTAAGGCTTCAATAACGAGGTTGCAGTCACTGATGGTG
GTCACATCACAGGCTGTTTCCACCACGTCCTCTGCCATTATTGGTCTAAGAGACTCTGAC
CTTGTCCCACAGCTTGTTGAACTTTGTCATGGATTTATGTACATGTGGAAATCCATGAAC
CAGTTCCATCAAGTTCAGAATGACATTGTGCAGCAGGTGCGTGGCCTCATCAATAGAGAA
ATTAATGGTCAATCGACATCTGACCTACACCGGCAGGCAACACGTGACCTTGAGTCTGCT
GTATCTGCATGGCACTCGAGTTATTGTCGCCTGATAAAATTTCAAAGGGACTTTATCCAG
TCCCTTCATGGTTGGTTCAAGCTCACCCTTGTGTCTGTCAATACTGAGCCAACTAATGGC
AACAGGGAGTTCTCAGATTCATTTATGTTTTGCGATGAATGGAAGCTAGCGCTTGACCGT
ATTCCTGACACTGTTGCATCAGAAGCTATCAAAAGCTTCATAAATGTTGTTCATTCGATA
TATGCGAAACAAACGGAGGAGCTGAAGATAAAAAAGCGGACTGAATCTGCATCGAAGGAG
CTTGAGAAAAAGGCTTCGAGTGTTAGGAGCATTGAAAGGAAGTATTACAATTCTTACTCC
ATGGTTGGCATTGGACTTCCTGATGTGGGACCTGATAATGGTAATGTTTTAGATGCACGG
GACCCTCTTGCTGAGAAAAAGGCTGAGCTTGCAGCTAGCCAACGGCGTGTGGAAGATGAG
ATGGTGAAGCATTCTAAAGCAGTGGAGGTAACCAGAGCAATGACTCTGAACAACATTCAG
ACAGGGCTTCCGGGAGTTTTCCAAGCTATGACCAGCTTTTCTTCCTTAATGACAGAGGCC
CTTGAGGCTGTATGCACCCGTTCTTATTCTATTAAGTAG