Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400066774
CDS Infomation

pacid=37441114 polypeptide=PGSC0003DMP400045025 locus=PGSC0003DMG400025962 ID=PGSC0003DMT400066774.v4.03 annot-version=v4.03
Sequence

ATGCCTCTTCTCCATCACAGATTTCATCTTCCCTTCCACCGGCAACCTCTCTTTTTCTTC
CCCACCACCACCAGAAAACTAATCCCAATTCACTCCATGTCCACTTCATCATCACAAACA
ACTCATCAACAAGAAGAAGACGAAGAAAAACAAGCTTCATTAGCCCAAGTCTTGAAGTAC
CATAAAGAAACGAAACATTCCTTCACCAACTACGCTCGTGGCCCTCGTGGTCTTGATTGG
GCAAATCAACCCAACCCTTTTCGCCGTTATGTTTCTTCTCCACTTATCCCTCTGTTACAC
CCTCCATATTCTGATGAATCTCCTCTTTACGCATCAGTTTTCAAGACTCTCCCTTTTCCC
AAACCCATTTCGGATTCCACAATTTCTCAGCTTTTCTACGATTCTTTAGCCTTATCAGCT
TGGAAATCGACTGGGTTTTCAACTTGGTCCCTTCGTGTAAACCCTAGTAGCGGAAATCTC
CATCCAACTGAAGCGTATATTATTTGTCCACCTGTTGAATCTGTATCAGACAAAGGTTTT
GTGGCTCATTATGCTCCAAAAGAACATTCTTTGGAAATTAGAGCCCAATTCTCATCTGGG
ATTTTCACAAGATTCTTCCCTGAAAATTCTTTCCTTATTGGGTTATCCTCTATTTTTTGG
AGGGAAGCTTGGAAGTATGGTGAAAGGGCATTTAGGTATTGTAATCATGATGTGGGTCAT
GCTATTGCTGCTGTTTCAATGGCAGCAGCAGGGCTTGGATGGGATGTGAAAGTTCTAGAT
GGATTAGGTTACGAGGAGTTAGAGAAGTTAACGGGCGTTGAAAATTTTCCCAAGTTTAAA
ATCCCATCTCGGCCCGTGAAAGGGGCAATGCCAGAGATTGAGTTTGAGCTTCCAGATTGT
GTTCTTTTGGTTTTCCCTAGTGGTTTGAGTGAATTTGAAGTGGATTATGAGGAGTTGAGC
TGTGCTATTTCGGAGTTTTCAGGTTTGGATTGGAAAGGCAAGCCTAATGTCCTTAGTAAA
GAGCACATTTGTTGGGATATTATATATAGAACAGCTGAAGCAGCGAAAAAGCCATTAACA
ATGTCTAATTTATCAGCAGTTGATCCATTCCAGAGTAGTGGAACATTTAGTGAAAGCTCT
TATAAAGATTTAACTTTAAGGGAAGTGGTTAGAAAGCGGAGGAGTGCAGTTGATATGGAT
GGTTCTACCGCAATGTCCAAAGAAACATTTTATCAGATATTATTGCATTGTATGCCTTCT
GGTTCACACGGTGGAAAGAAACATGTTAGGCAATTGGCATTGCCATTTAGGTCACTTGAT
TGGGATAGTGAAGTCCATGCTGCTCTGTTTGTTCATAGAATTGTTGGCTTGCCGAACGGA
TTATATTTTTTGGTGAGAAACGAGAGCCATTTGGATGATCTTAAGAAAGCTACTAGAGAT
GAGTTTAAATGGGTGAAACCAGATGGTTGTCCTGATGATCTTCCTTTATATGAGCTTGCA
AGTGGAGACTGCAGGGAGCTTTCAAAACGATTGTCATGCCATCAGGACATTGCTAGTGAT
GGCTGCTTCAGCTTGGGCATGATTGCACATTTCGAGCCCACTTTGCGCAACAAGGGTTCC
TGGATGTACCCACGGCTATTTTGGGAGACAGGAGTGCTCGGACAAGTTTTGTATCTTGAA
TCGCATGCAGTTGGCATCTCTGCTACCGGGATTGGTTGTTTCTTTGATGATCCTGTACAT
GAAGTTCTTGGGTTGAAAGGATCAAAGTTTCAGAGCCTCTATCATTTTACAGTTGGAAGT
CCAGTTGTTGACAAGAGGATAATGAGTCTGCCAGCATACCCAGGCCCAAGCGATGATGCA
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400045025
PEP Infomation

pacid=37441114 transcript=PGSC0003DMT400066774 locus=PGSC0003DMG400025962 ID=PGSC0003DMT400066774.v4.03 annot-version=v4.03
Sequence

MPLLHHRFHLPFHRQPLFFFPTTTRKLIPIHSMSTSSSQTTHQQEEDEEKQASLAQVLKY
HKETKHSFTNYARGPRGLDWANQPNPFRRYVSSPLIPLLHPPYSDESPLYASVFKTLPFP
KPISDSTISQLFYDSLALSAWKSTGFSTWSLRVNPSSGNLHPTEAYIICPPVESVSDKGF
VAHYAPKEHSLEIRAQFSSGIFTRFFPENSFLIGLSSIFWREAWKYGERAFRYCNHDVGH
AIAAVSMAAAGLGWDVKVLDGLGYEELEKLTGVENFPKFKIPSRPVKGAMPEIEFELPDC
VLLVFPSGLSEFEVDYEELSCAISEFSGLDWKGKPNVLSKEHICWDIIYRTAEAAKKPLT
MSNLSAVDPFQSSGTFSESSYKDLTLREVVRKRRSAVDMDGSTAMSKETFYQILLHCMPS
GSHGGKKHVRQLALPFRSLDWDSEVHAALFVHRIVGLPNGLYFLVRNESHLDDLKKATRD
EFKWVKPDGCPDDLPLYELASGDCRELSKRLSCHQDIASDGCFSLGMIAHFEPTLRNKGS
WMYPRLFWETGVLGQVLYLESHAVGISATGIGCFFDDPVHEVLGLKGSKFQSLYHFTVGS
PVVDKRIMSLPAYPGPSDDA*

Transcript Sequence

Transcript ID

PGSC0003DMT400066774
Transcript Infomation

pacid=37441114 locus=PGSC0003DMG400025962 ID=PGSC0003DMT400066774.v4.03 annot-version=v4.03
Sequence

ATGCCTCTTCTCCATCACAGATTTCATCTTCCCTTCCACCGGCAACCTCTCTTTTTCTTC
CCCACCACCACCAGAAAACTAATCCCAATTCACTCCATGTCCACTTCATCATCACAAACA
ACTCATCAACAAGAAGAAGACGAAGAAAAACAAGCTTCATTAGCCCAAGTCTTGAAGTAC
CATAAAGAAACGAAACATTCCTTCACCAACTACGCTCGTGGCCCTCGTGGTCTTGATTGG
GCAAATCAACCCAACCCTTTTCGCCGTTATGTTTCTTCTCCACTTATCCCTCTGTTACAC
CCTCCATATTCTGATGAATCTCCTCTTTACGCATCAGTTTTCAAGACTCTCCCTTTTCCC
AAACCCATTTCGGATTCCACAATTTCTCAGCTTTTCTACGATTCTTTAGCCTTATCAGCT
TGGAAATCGACTGGGTTTTCAACTTGGTCCCTTCGTGTAAACCCTAGTAGCGGAAATCTC
CATCCAACTGAAGCGTATATTATTTGTCCACCTGTTGAATCTGTATCAGACAAAGGTTTT
GTGGCTCATTATGCTCCAAAAGAACATTCTTTGGAAATTAGAGCCCAATTCTCATCTGGG
ATTTTCACAAGATTCTTCCCTGAAAATTCTTTCCTTATTGGGTTATCCTCTATTTTTTGG
AGGGAAGCTTGGAAGTATGGTGAAAGGGCATTTAGGTATTGTAATCATGATGTGGGTCAT
GCTATTGCTGCTGTTTCAATGGCAGCAGCAGGGCTTGGATGGGATGTGAAAGTTCTAGAT
GGATTAGGTTACGAGGAGTTAGAGAAGTTAACGGGCGTTGAAAATTTTCCCAAGTTTAAA
ATCCCATCTCGGCCCGTGAAAGGGGCAATGCCAGAGATTGAGTTTGAGCTTCCAGATTGT
GTTCTTTTGGTTTTCCCTAGTGGTTTGAGTGAATTTGAAGTGGATTATGAGGAGTTGAGC
TGTGCTATTTCGGAGTTTTCAGGTTTGGATTGGAAAGGCAAGCCTAATGTCCTTAGTAAA
GAGCACATTTGTTGGGATATTATATATAGAACAGCTGAAGCAGCGAAAAAGCCATTAACA
ATGTCTAATTTATCAGCAGTTGATCCATTCCAGAGTAGTGGAACATTTAGTGAAAGCTCT
TATAAAGATTTAACTTTAAGGGAAGTGGTTAGAAAGCGGAGGAGTGCAGTTGATATGGAT
GGTTCTACCGCAATGTCCAAAGAAACATTTTATCAGATATTATTGCATTGTATGCCTTCT
GGTTCACACGGTGGAAAGAAACATGTTAGGCAATTGGCATTGCCATTTAGGTCACTTGAT
TGGGATAGTGAAGTCCATGCTGCTCTGTTTGTTCATAGAATTGTTGGCTTGCCGAACGGA
TTATATTTTTTGGTGAGAAACGAGAGCCATTTGGATGATCTTAAGAAAGCTACTAGAGAT
GAGTTTAAATGGGTGAAACCAGATGGTTGTCCTGATGATCTTCCTTTATATGAGCTTGCA
AGTGGAGACTGCAGGGAGCTTTCAAAACGATTGTCATGCCATCAGGACATTGCTAGTGAT
GGCTGCTTCAGCTTGGGCATGATTGCACATTTCGAGCCCACTTTGCGCAACAAGGGTTCC
TGGATGTACCCACGGCTATTTTGGGAGACAGGAGTGCTCGGACAAGTTTTGTATCTTGAA
TCGCATGCAGTTGGCATCTCTGCTACCGGGATTGGTTGTTTCTTTGATGATCCTGTACAT
GAAGTTCTTGGGTTGAAAGGATCAAAGTTTCAGAGCCTCTATCATTTTACAGTTGGAAGT
CCAGTTGTTGACAAGAGGATAATGAGTCTGCCAGCATACCCAGGCCCAAGCGATGATGCA
TGA