Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400066643
CDS Infomation

pacid=37441505 polypeptide=PGSC0003DMP400044937 locus=PGSC0003DMG402025899 ID=PGSC0003DMT400066643.v4.03 annot-version=v4.03
Sequence

ATGGAGAAGCAACACATGAAATACATGTTCCTCACAAAATTGAACTTCTTTTTCCTTGTA
ACATTAATTTTTCATGGTCTAATTGTCCATGGCTTCCAAATGGATAATCAGGCACGTACA
TTAATGTCGTGGCGTCGTTCGAAAATACGTTCTCGAATGATTAATTCTTATCAGGATGAA
ACATGGTCCACTGAAAAATTGGTATTTGATTCTGATGAAGAAGAAAAATTACATGTTGGA
AATATGGAGGATGATTTGATAAAAGATGGTCTTCCAGGACAACCAAAAACAAATGTGAAG
TTTAAGCAGTATGCAGGTTATGTTAATGTTGATGAAAAAAATGGAAGAAGCCTTTTTTAT
TACTTTGCTGAATCTGCTTCTGGAAATGCTTCTTCTAAACCACTTGTTCTTTGGCTAAAT
GGAGGTCCAGGATGTTCATCATTAGGATTTGGGGCCATGCTAGAGCTTGGGCCTTTTGGT
GTAAAACCTGATGGTAAAACCCTTTATTCCAGAACATTTTCTTGGAACAAAGTTGCAAAT
GTAATGTTCCTGGAGTCACCAGCAGGGGTTGGCTTCTCCTATTCCAATACTAGCTCAGAT
TATGCACAATCAGGCGACAAGAGGACTGCTCAAGATGCATATAGGTTTCTAGTGAATTGG
TTCAAGAGGTTTCCACATTACAAAAGCAGGGATTTCTACATCATGGGAGAAAGTTATGCA
GGATTCTACGTGCCAGAGCTAGCAGACATCATTGTCAAGAGCAACATGCTAACCAACACA
AACTTCAACATCCAATTCAAAGGAATAATGATAGGAAATGGTATAATGAACGATGTAACA
GACGAGAAAGGGCAATTAGATTATTTATGGAGTCATGCACTAATATCAGACGAGACTTAT
TTAGGCATCCAACAACATTGCAAAACCCAAACTGAGACAAAAACATGTGAACAATTTCAA
AGCACAGCTCAAACTGAGTTTGGAAACATAGATCCTTACAACATCTATGGTCCCATTTGT
CCCCTTGATGACGATGATTCATCATCGTCATCAAGAAGAAGAGTATTCAAGAAAAATGGA
TATGATCCTTGTGAACAATATTATGTTCGCGATTATCTCAATCTTCCTCAAGTTCAAAAG
GCCTTGCATGCCAACCTCACCAACCTTCCTAACCCTTGGGAACCTTGCAGTGGTCTGCCT
TGGAAGGATAGTCCATCAAGTATGTTTCCAATATACAATAGACTAATTGCATCTGGTCTC
AGGATACTTCTTTTCAGTGGAGATGTAGATGCAGTAGTTTCAGTAACTTCAACTCGTTAT
AGCATCAGTGCTATGAACCTTACAGTCATCAAGCCTTGGCATGTTTGGCATGATGATACA
AAAGAAGTAGCTGGATATATGGTGGTGTATGATGGATTAGCTTTTGCAACAGTTAGGGGA
GCAGGGCATCAAGTTCCACAATTTCAACCACGTAGAGCTTTTGCTTTGTTGAATATGTTT
TTTGCCAATCATTTTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400044937
PEP Infomation

pacid=37441505 transcript=PGSC0003DMT400066643 locus=PGSC0003DMG402025899 ID=PGSC0003DMT400066643.v4.03 annot-version=v4.03
Sequence

MEKQHMKYMFLTKLNFFFLVTLIFHGLIVHGFQMDNQARTLMSWRRSKIRSRMINSYQDE
TWSTEKLVFDSDEEEKLHVGNMEDDLIKDGLPGQPKTNVKFKQYAGYVNVDEKNGRSLFY
YFAESASGNASSKPLVLWLNGGPGCSSLGFGAMLELGPFGVKPDGKTLYSRTFSWNKVAN
VMFLESPAGVGFSYSNTSSDYAQSGDKRTAQDAYRFLVNWFKRFPHYKSRDFYIMGESYA
GFYVPELADIIVKSNMLTNTNFNIQFKGIMIGNGIMNDVTDEKGQLDYLWSHALISDETY
LGIQQHCKTQTETKTCEQFQSTAQTEFGNIDPYNIYGPICPLDDDDSSSSSRRRVFKKNG
YDPCEQYYVRDYLNLPQVQKALHANLTNLPNPWEPCSGLPWKDSPSSMFPIYNRLIASGL
RILLFSGDVDAVVSVTSTRYSISAMNLTVIKPWHVWHDDTKEVAGYMVVYDGLAFATVRG
AGHQVPQFQPRRAFALLNMFFANHF*

Transcript Sequence

Transcript ID

PGSC0003DMT400066643
Transcript Infomation

pacid=37441505 locus=PGSC0003DMG402025899 ID=PGSC0003DMT400066643.v4.03 annot-version=v4.03
Sequence

ATGGAGAAGCAACACATGAAATACATGTTCCTCACAAAATTGAACTTCTTTTTCCTTGTA
ACATTAATTTTTCATGGTCTAATTGTCCATGGCTTCCAAATGGATAATCAGGCACGTACA
TTAATGTCGTGGCGTCGTTCGAAAATACGTTCTCGAATGATTAATTCTTATCAGGATGAA
ACATGGTCCACTGAAAAATTGGTATTTGATTCTGATGAAGAAGAAAAATTACATGTTGGA
AATATGGAGGATGATTTGATAAAAGATGGTCTTCCAGGACAACCAAAAACAAATGTGAAG
TTTAAGCAGTATGCAGGTTATGTTAATGTTGATGAAAAAAATGGAAGAAGCCTTTTTTAT
TACTTTGCTGAATCTGCTTCTGGAAATGCTTCTTCTAAACCACTTGTTCTTTGGCTAAAT
GGAGGTCCAGGATGTTCATCATTAGGATTTGGGGCCATGCTAGAGCTTGGGCCTTTTGGT
GTAAAACCTGATGGTAAAACCCTTTATTCCAGAACATTTTCTTGGAACAAAGTTGCAAAT
GTAATGTTCCTGGAGTCACCAGCAGGGGTTGGCTTCTCCTATTCCAATACTAGCTCAGAT
TATGCACAATCAGGCGACAAGAGGACTGCTCAAGATGCATATAGGTTTCTAGTGAATTGG
TTCAAGAGGTTTCCACATTACAAAAGCAGGGATTTCTACATCATGGGAGAAAGTTATGCA
GGATTCTACGTGCCAGAGCTAGCAGACATCATTGTCAAGAGCAACATGCTAACCAACACA
AACTTCAACATCCAATTCAAAGGAATAATGATAGGAAATGGTATAATGAACGATGTAACA
GACGAGAAAGGGCAATTAGATTATTTATGGAGTCATGCACTAATATCAGACGAGACTTAT
TTAGGCATCCAACAACATTGCAAAACCCAAACTGAGACAAAAACATGTGAACAATTTCAA
AGCACAGCTCAAACTGAGTTTGGAAACATAGATCCTTACAACATCTATGGTCCCATTTGT
CCCCTTGATGACGATGATTCATCATCGTCATCAAGAAGAAGAGTATTCAAGAAAAATGGA
TATGATCCTTGTGAACAATATTATGTTCGCGATTATCTCAATCTTCCTCAAGTTCAAAAG
GCCTTGCATGCCAACCTCACCAACCTTCCTAACCCTTGGGAACCTTGCAGTGGTCTGCCT
TGGAAGGATAGTCCATCAAGTATGTTTCCAATATACAATAGACTAATTGCATCTGGTCTC
AGGATACTTCTTTTCAGTGGAGATGTAGATGCAGTAGTTTCAGTAACTTCAACTCGTTAT
AGCATCAGTGCTATGAACCTTACAGTCATCAAGCCTTGGCATGTTTGGCATGATGATACA
AAAGAAGTAGCTGGATATATGGTGGTGTATGATGGATTAGCTTTTGCAACAGTTAGGGGA
GCAGGGCATCAAGTTCCACAATTTCAACCACGTAGAGCTTTTGCTTTGTTGAATATGTTT
TTTGCCAATCATTTTTAG