Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400066606
CDS Infomation

pacid=37440431 polypeptide=PGSC0003DMP400044914 locus=PGSC0003DMG400025890 ID=PGSC0003DMT400066606.v4.03 annot-version=v4.03
Sequence

ATGGAGCTCAAGCCAGGCCTATCAGCGTTGGTCACCGGCGGTGCCTCCGGAATTGGTAAG
GCACTATGTTTGGCTCTTGCCAAGAAGGGAGTTTTTGTTACAATTGTTGATTTCTCAGAA
GAGAAAGGCAAAGAAGTTGCAGGCCTTGCTGAGAAAGAGTGCGCTGAGTTCCATTCTGGA
TTGGAATTTCCAGTTGTTATGTTCATCAGATGTGATGTCTCTAATACAGGAGAACTAAAA
GCTGCTTTTGAGAAGCATTTTGTAACATATGGAGGACTAGATATCTGTATTAACAGTGCA
GGCATCGGTGATATTGTTCCATTCCACAACGATCGAACTGATGGGTCTAAAAGCTGGAGA
CATGTAGTTAATGTGAACCTCGTCGCAGTTATAGATTGCACTCGTCTTGCGATTCAAGCC
ATGCAAACTGACCAAAAGCCAGGTGTAATAATAAATTTAGGCTCTTCTTCAGGACTCTAT
CCGATGTATACAGGCCCTATCTATTCTGCCACCAAAGGGGGTGTTGTCATGTTTACGAGA
TCACTTGCTCGTTTTAAGCACCAAGGAATCCGCATCAATGTGCTCTGCCCTGAGTATGTC
CAAACTGATTTGGCAGAAAAGGCTGTCGGTTCATATGTTGATCGATTTGGAGGGTATGTT
CCTATGGAACTTGTGGTGGAAGGTGCTTTTGAACTAATCAGAGATGAGAGTAAAGCAGGG
TCATGTCTTTGGATTACTAACAGAAGGGGTCTGGAGTATTGGCCAACTCCTGCTGAAGAA
GCAAAATACCTCCTCCGCTCTTCGAAAACACGCAAAAAATCATTGGTCACAGTTCCAATG
GATCTTCAGATTCCTCACAGTTTTGAAAAAGTAGTCGTTCACACGTTGAGTCACAATTTC
CGTAGTGCTACCAGAATTGTGCGCACTGAATTGAGGTTGCCTCTCAAGGCAGATCATGTT
CTATTAAAAGTCATCTATGCTGGTGTTAATGCTAGTGATGTCAACTTCAGCTCAGGGCGG
TATTTCAGTGGAAATGGCAAAGACATCACCTCCCTCCTTCCACTGGATTCTGGCTTCGAG
GCTGTGGGAATAATTGCTGCAATTGGTGATGCTGTTAGAAATTTAAAGATTGGTATGCCT
GCTGCCATAATGACTTTTGGCGGTTATGCTGAATTTGTCATGGTCCCTTCCAAACACATC
CTTCCTGTAGCAAAACCAGATCCAGAAGTACTTGCAATGCTTACCTCTGGACTCACCGCA
TCAATTGCTTTGGAAAAGGCTGCTCAAATGGAATCGGGAAAAGTTGTCCTCGTGACTGCT
GCTGCAGGAGCAACAGGGCAATTTGCAGTGCAGCTCGCAAAATTAGCTGGAAACACAGTA
ATTGCAACTTGTGGAGGTTATGTAAAGGCTAAGCTTCTTAAGGATTTGGGAGTCGATCGA
GCCATTGACTACAAAGTGGAAGATATAAAATCTGTTTTAAAGAAGGAGTTCCCTAAAGGT
ACTGATATTGTCTACGAGTCCGTTGGTGGTGAGATGTTTGACATTTGCTTGAATGCATTG
GCTGTCTATGGACGACTTGTTGTCATTGGAATGATTTCTCAGTATCAAGGAGAACATGGG
TGGAAACCTCGGAATTACACTGGAATTTGTGAAAAGCTTCTAGCGAAAAGTCAAACGGTG
GCTGGGTTTTTCCTGATACAATATGCTCACCTATGGCAAGAGCATTTGGATAGACTGGTT
AATCTTTTCTCTTCTGGAAAGCTTAAGATTGGTATAGATCCCAAACAATTTGTTGGCCTA
CATTCAGTTGCCGATGCTGTTGAGTACCTTCATTCTGGTGAAAGTGCTGGAAAGGTTGTC
GTTTGCGTTGACCCGACATACGCTCAACAACCTGCAAAACTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400044914
PEP Infomation

pacid=37440431 transcript=PGSC0003DMT400066606 locus=PGSC0003DMG400025890 ID=PGSC0003DMT400066606.v4.03 annot-version=v4.03
Sequence

MELKPGLSALVTGGASGIGKALCLALAKKGVFVTIVDFSEEKGKEVAGLAEKECAEFHSG
LEFPVVMFIRCDVSNTGELKAAFEKHFVTYGGLDICINSAGIGDIVPFHNDRTDGSKSWR
HVVNVNLVAVIDCTRLAIQAMQTDQKPGVIINLGSSSGLYPMYTGPIYSATKGGVVMFTR
SLARFKHQGIRINVLCPEYVQTDLAEKAVGSYVDRFGGYVPMELVVEGAFELIRDESKAG
SCLWITNRRGLEYWPTPAEEAKYLLRSSKTRKKSLVTVPMDLQIPHSFEKVVVHTLSHNF
RSATRIVRTELRLPLKADHVLLKVIYAGVNASDVNFSSGRYFSGNGKDITSLLPLDSGFE
AVGIIAAIGDAVRNLKIGMPAAIMTFGGYAEFVMVPSKHILPVAKPDPEVLAMLTSGLTA
SIALEKAAQMESGKVVLVTAAAGATGQFAVQLAKLAGNTVIATCGGYVKAKLLKDLGVDR
AIDYKVEDIKSVLKKEFPKGTDIVYESVGGEMFDICLNALAVYGRLVVIGMISQYQGEHG
WKPRNYTGICEKLLAKSQTVAGFFLIQYAHLWQEHLDRLVNLFSSGKLKIGIDPKQFVGL
HSVADAVEYLHSGESAGKVVVCVDPTYAQQPAKL*

Transcript Sequence

Transcript ID

PGSC0003DMT400066606
Transcript Infomation

pacid=37440431 locus=PGSC0003DMG400025890 ID=PGSC0003DMT400066606.v4.03 annot-version=v4.03
Sequence

ATGGAGCTCAAGCCAGGCCTATCAGCGTTGGTCACCGGCGGTGCCTCCGGAATTGGTAAG
GCACTATGTTTGGCTCTTGCCAAGAAGGGAGTTTTTGTTACAATTGTTGATTTCTCAGAA
GAGAAAGGCAAAGAAGTTGCAGGCCTTGCTGAGAAAGAGTGCGCTGAGTTCCATTCTGGA
TTGGAATTTCCAGTTGTTATGTTCATCAGATGTGATGTCTCTAATACAGGAGAACTAAAA
GCTGCTTTTGAGAAGCATTTTGTAACATATGGAGGACTAGATATCTGTATTAACAGTGCA
GGCATCGGTGATATTGTTCCATTCCACAACGATCGAACTGATGGGTCTAAAAGCTGGAGA
CATGTAGTTAATGTGAACCTCGTCGCAGTTATAGATTGCACTCGTCTTGCGATTCAAGCC
ATGCAAACTGACCAAAAGCCAGGTGTAATAATAAATTTAGGCTCTTCTTCAGGACTCTAT
CCGATGTATACAGGCCCTATCTATTCTGCCACCAAAGGGGGTGTTGTCATGTTTACGAGA
TCACTTGCTCGTTTTAAGCACCAAGGAATCCGCATCAATGTGCTCTGCCCTGAGTATGTC
CAAACTGATTTGGCAGAAAAGGCTGTCGGTTCATATGTTGATCGATTTGGAGGGTATGTT
CCTATGGAACTTGTGGTGGAAGGTGCTTTTGAACTAATCAGAGATGAGAGTAAAGCAGGG
TCATGTCTTTGGATTACTAACAGAAGGGGTCTGGAGTATTGGCCAACTCCTGCTGAAGAA
GCAAAATACCTCCTCCGCTCTTCGAAAACACGCAAAAAATCATTGGTCACAGTTCCAATG
GATCTTCAGATTCCTCACAGTTTTGAAAAAGTAGTCGTTCACACGTTGAGTCACAATTTC
CGTAGTGCTACCAGAATTGTGCGCACTGAATTGAGGTTGCCTCTCAAGGCAGATCATGTT
CTATTAAAAGTCATCTATGCTGGTGTTAATGCTAGTGATGTCAACTTCAGCTCAGGGCGG
TATTTCAGTGGAAATGGCAAAGACATCACCTCCCTCCTTCCACTGGATTCTGGCTTCGAG
GCTGTGGGAATAATTGCTGCAATTGGTGATGCTGTTAGAAATTTAAAGATTGGTATGCCT
GCTGCCATAATGACTTTTGGCGGTTATGCTGAATTTGTCATGGTCCCTTCCAAACACATC
CTTCCTGTAGCAAAACCAGATCCAGAAGTACTTGCAATGCTTACCTCTGGACTCACCGCA
TCAATTGCTTTGGAAAAGGCTGCTCAAATGGAATCGGGAAAAGTTGTCCTCGTGACTGCT
GCTGCAGGAGCAACAGGGCAATTTGCAGTGCAGCTCGCAAAATTAGCTGGAAACACAGTA
ATTGCAACTTGTGGAGGTTATGTAAAGGCTAAGCTTCTTAAGGATTTGGGAGTCGATCGA
GCCATTGACTACAAAGTGGAAGATATAAAATCTGTTTTAAAGAAGGAGTTCCCTAAAGGT
ACTGATATTGTCTACGAGTCCGTTGGTGGTGAGATGTTTGACATTTGCTTGAATGCATTG
GCTGTCTATGGACGACTTGTTGTCATTGGAATGATTTCTCAGTATCAAGGAGAACATGGG
TGGAAACCTCGGAATTACACTGGAATTTGTGAAAAGCTTCTAGCGAAAAGTCAAACGGTG
GCTGGGTTTTTCCTGATACAATATGCTCACCTATGGCAAGAGCATTTGGATAGACTGGTT
AATCTTTTCTCTTCTGGAAAGCTTAAGATTGGTATAGATCCCAAACAATTTGTTGGCCTA
CATTCAGTTGCCGATGCTGTTGAGTACCTTCATTCTGGTGAAAGTGCTGGAAAGGTTGTC
GTTTGCGTTGACCCGACATACGCTCAACAACCTGCAAAACTCTAA