Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400066588
CDS Infomation

pacid=37435330 polypeptide=PGSC0003DMP400044898 locus=PGSC0003DMG400025884 ID=PGSC0003DMT400066588.v4.03 annot-version=v4.03
Sequence

ATGCCTGGAAGTTTAGACCCTTTGGATGTTGGTGTTCAGATTCCATACCATTTTCGTTGT
CCAATCTCCTTAGAGCTTATGCGAGATCCGGTCACCGTCTGTACCGGTCAAACTTACGAC
CGCCAAAGCATTGAGTCCTGGGTCGCCACCGGAAATATTACTTGTCCGGTAACAAGGGCG
CCGCTCAGTGATTTCACTCTTATTCCAAATCATACTCTTCGCCGCCTTATACAGGAGTGG
TGTGTTGCGAACCGGGCTTTCGGAGTTGAGCGGATTCCGACGCCGAAACAACCGGCTGAT
CCGTCGTTGGTCCGGTCGTTGCTGAATCAGGCGGCGGCTCAGTCGAATCATATGAATTCT
AGGGTAGCGGCGTTGAGGAGACTCAGAGGACTAGCTCGTGACTCGGATAAGAACCGGTCT
GTAATTTCGGCGAACAACGCACGGGAAATTCTTCTGGCGATTGTATTCTCCCGTATGGAT
TCGGACTCATCGGAGTTGAATCACGAGTCTCTCGCGATTCTATCCATGTTTCCGCTCTCT
GAACCGGAATGTGTTTTTGTCGCTTCCGATCCGGAACGAGTTAGTTACCTGGTTGCTATG
CTTTTTCATCCTTCCATCGATGTCCGAGTCAACTCAGCTGCTTTGATTGAGATTGTAGTC
GCCGGAATGAGATCCTCGGAGCTCCGTGCTCAAATCAGCAATGCGGATGACGTCTTCGAA
GGAGTCGTCGGAATTTTGAATTATCCGTTGGCGTATCCGAGAGCGTTGAAAGTCGGAATC
AAGGCGTTATTTGCTTTATGCCTAGTAAAGCAACACCGACAAAGAGCGGTGACCGCCGGA
GCGGTGGAAGCGCTAATCGATAGGCTACAGGATTTCGAGAAATGCGATGCGGAAAGAGCA
CTCGCCACAATCGAACTCCTCTCCAGAATTCCATCAGGATGCGCTGCGTTAGCATCTCAC
GCGCTAACGGTGCCTCTCCTGGTGAAAATTATCCTGAAGATATCGGAGCGTGCGACGGAA
TACGCCGCCGGAGCACTGCTATCGCTTTGCTCAGCGTCGGAACAAGCTCAGAAAGAGGCG
GTCGCCGCTGGCGTGTTGATTCAGCTGCTGCTGTTAGTTCAAAGCGATTGTACAGAACGT
GCGAAGCGAAAAGCACAAATGCTTTTGAAGCAGCTTCGCGATTGTTGGCCGGAGGACTCC
ATCGCCAATTCAGATGATTTTGCCTGCAGCGACGTCGTTCCGTTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400044898
PEP Infomation

pacid=37435330 transcript=PGSC0003DMT400066588 locus=PGSC0003DMG400025884 ID=PGSC0003DMT400066588.v4.03 annot-version=v4.03
Sequence

MPGSLDPLDVGVQIPYHFRCPISLELMRDPVTVCTGQTYDRQSIESWVATGNITCPVTRA
PLSDFTLIPNHTLRRLIQEWCVANRAFGVERIPTPKQPADPSLVRSLLNQAAAQSNHMNS
RVAALRRLRGLARDSDKNRSVISANNAREILLAIVFSRMDSDSSELNHESLAILSMFPLS
EPECVFVASDPERVSYLVAMLFHPSIDVRVNSAALIEIVVAGMRSSELRAQISNADDVFE
GVVGILNYPLAYPRALKVGIKALFALCLVKQHRQRAVTAGAVEALIDRLQDFEKCDAERA
LATIELLSRIPSGCAALASHALTVPLLVKIILKISERATEYAAGALLSLCSASEQAQKEA
VAAGVLIQLLLLVQSDCTERAKRKAQMLLKQLRDCWPEDSIANSDDFACSDVVPF*

Transcript Sequence

Transcript ID

PGSC0003DMT400066588
Transcript Infomation

pacid=37435330 locus=PGSC0003DMG400025884 ID=PGSC0003DMT400066588.v4.03 annot-version=v4.03
Sequence

ATGCCTGGAAGTTTAGACCCTTTGGATGTTGGTGTTCAGATTCCATACCATTTTCGTTGT
CCAATCTCCTTAGAGCTTATGCGAGATCCGGTCACCGTCTGTACCGGTCAAACTTACGAC
CGCCAAAGCATTGAGTCCTGGGTCGCCACCGGAAATATTACTTGTCCGGTAACAAGGGCG
CCGCTCAGTGATTTCACTCTTATTCCAAATCATACTCTTCGCCGCCTTATACAGGAGTGG
TGTGTTGCGAACCGGGCTTTCGGAGTTGAGCGGATTCCGACGCCGAAACAACCGGCTGAT
CCGTCGTTGGTCCGGTCGTTGCTGAATCAGGCGGCGGCTCAGTCGAATCATATGAATTCT
AGGGTAGCGGCGTTGAGGAGACTCAGAGGACTAGCTCGTGACTCGGATAAGAACCGGTCT
GTAATTTCGGCGAACAACGCACGGGAAATTCTTCTGGCGATTGTATTCTCCCGTATGGAT
TCGGACTCATCGGAGTTGAATCACGAGTCTCTCGCGATTCTATCCATGTTTCCGCTCTCT
GAACCGGAATGTGTTTTTGTCGCTTCCGATCCGGAACGAGTTAGTTACCTGGTTGCTATG
CTTTTTCATCCTTCCATCGATGTCCGAGTCAACTCAGCTGCTTTGATTGAGATTGTAGTC
GCCGGAATGAGATCCTCGGAGCTCCGTGCTCAAATCAGCAATGCGGATGACGTCTTCGAA
GGAGTCGTCGGAATTTTGAATTATCCGTTGGCGTATCCGAGAGCGTTGAAAGTCGGAATC
AAGGCGTTATTTGCTTTATGCCTAGTAAAGCAACACCGACAAAGAGCGGTGACCGCCGGA
GCGGTGGAAGCGCTAATCGATAGGCTACAGGATTTCGAGAAATGCGATGCGGAAAGAGCA
CTCGCCACAATCGAACTCCTCTCCAGAATTCCATCAGGATGCGCTGCGTTAGCATCTCAC
GCGCTAACGGTGCCTCTCCTGGTGAAAATTATCCTGAAGATATCGGAGCGTGCGACGGAA
TACGCCGCCGGAGCACTGCTATCGCTTTGCTCAGCGTCGGAACAAGCTCAGAAAGAGGCG
GTCGCCGCTGGCGTGTTGATTCAGCTGCTGCTGTTAGTTCAAAGCGATTGTACAGAACGT
GCGAAGCGAAAAGCACAAATGCTTTTGAAGCAGCTTCGCGATTGTTGGCCGGAGGACTCC
ATCGCCAATTCAGATGATTTTGCCTGCAGCGACGTCGTTCCGTTTTGA