Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400066563
CDS Infomation

pacid=37441334 polypeptide=PGSC0003DMP400044877 locus=PGSC0003DMG401025870 ID=PGSC0003DMT400066563.v4.03 annot-version=v4.03
Sequence

ATGGATTCTGGATCTGCTGATGTATCAAATTCACAACCTGTTACAACATCAAGTGTAGCA
AAGTCTACTGCAGTGGAGTCTGCACCAGTTCAGTCAACAGAAGAGGCGCCTTCAAAGATT
TCTACTTCAGGCATCTCGTCATGGGCCAAAAATTTAAAAATTCCACAACCGTTTACTGGG
TCCCAAGATGAACAATCATCCGGAAATGCTCCCAAATCAACCTTTGCTCGTTTAACTGGT
GGGCTTGGAATGCGTCTGTCCCCTAAATCTCCTACATCTCCTACAGATGAACATCTTGAT
GGAACATCACCAACCAGTTTATTTGGAACATTCACCAAAGGATTGGTTGACTCTTCAAAG
AATGCAGTGAAGGCTGTGCAGGTTAAAGCGCGACATGTTGTATCCCAGAATAAGAGAAGA
TATCAGGAAGGAGGATTTGATTTAGACTTGACCTACATAACAGAGAATATAATTGCCATG
GGATTCCCTGCTGGTGACATGAGCTCTGGCCTTTTTGGCTATGTTGAGGGGTTCTACAGA
AACCACATGGAAGAAGTAATTAAATTCTTTGAAACTCATCATAAGGATAAATACAAAGTA
TACAATCTTTGTGCTGAAAGATTGTATGATGCTTCTCTATTTGAGGGGAAGGTTGCTAGT
TTCCCATTTGATGATCACAACTGCCCTCCTATTCAACTCATTATATCGTTTTGTCAAAGT
GCATACTCATGGTTGAAGGAGGATATCGAAAATGTTGTGGTTGTGCATTGTAAGGCGGGA
ATGGCAAGAACTGGTTTGATGATCTCTAGTCTTCTTCTATACTTGAAGTTCTTTCCTACA
GCAGAGGAGTCTATGGATTACTACAATCAAAAGAGATGCGTAGACGGAAAAGGACTAGTG
CTGCCGAGCCAGATTAGATATGTCAAGTATTTTGAACGCATCTTAATGTACTTTAATGGA
GAAAACCAGCCTGGACGCAGGTGCATGCTCAGAGGATTTCGCCTGCATAGGTGCCCTTAT
TGGATAAGACCTTCTATCACCGTATCTGATCATAATGGTGTGCTCTTTTCATCCAAAAAA
CATCCAAGAACCAAGGATCTATCGCCTGAGGATTTTTGGTTCAATGCACCAAAGAAAGGG
GTAGTGGTTTTTGCTCTTCCAGGCGAGCCTGGCCTTGCAGAATTAGCTGGGGATTTCAAA
ATTCATTTTCATGACCGTCAAGGAGACTTTTACTGTTGGTTGAATACAACAATGATAGAG
AACAGGAAAGTCCTGATGATAAGTGATCTTGATGGTTTTGACAAGAGAAAGTTACCATCA
CCTGGTTTCCAAGTGGAAGTAGTCCTTGCGGACTATGATGCTGCTCTTCCCCAATCAGAA
ACTGCCACCAAAGAATCAGCTGACAGTTCAAGTGCTAATACTGCCCCTGTGTCTAATCCT
ACCTCAGGCAGTGAGCCTGCTGATGGAAGTAACATGAACCAACAACCTGGGAACAATGAC
AAGGACGATGTGTTCTCAGACAATGAATCTGAGGAACCTGGAATGTCAAAAGCTAGACAA
ACTAAAGCTGCTTCTGAAGTTAATGCTCCTGCAGATGCAAAAACCCCTGGATCAAAGAAC
AAGAACGATTCAGATAAAATATCAAGCTTGACACATAAGACAGAACAAGTCTCATTGGGA
GACACAAGCTCTGTACACAGCGAGCCCAAAAAAGATGCCTCAGTCGGAGCTACGTCTAGT
GTTGATGTGTCCAATCCGGTTGGAGGAGTGAGTGATTTCAAGGTCATGGCAGCTGATGCA
TCTGTTTTCTCATTTGGTGATGAAGAAGATTATGAAAGTGACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400044877
PEP Infomation

pacid=37441334 transcript=PGSC0003DMT400066563 locus=PGSC0003DMG401025870 ID=PGSC0003DMT400066563.v4.03 annot-version=v4.03
Sequence

MDSGSADVSNSQPVTTSSVAKSTAVESAPVQSTEEAPSKISTSGISSWAKNLKIPQPFTG
SQDEQSSGNAPKSTFARLTGGLGMRLSPKSPTSPTDEHLDGTSPTSLFGTFTKGLVDSSK
NAVKAVQVKARHVVSQNKRRYQEGGFDLDLTYITENIIAMGFPAGDMSSGLFGYVEGFYR
NHMEEVIKFFETHHKDKYKVYNLCAERLYDASLFEGKVASFPFDDHNCPPIQLIISFCQS
AYSWLKEDIENVVVVHCKAGMARTGLMISSLLLYLKFFPTAEESMDYYNQKRCVDGKGLV
LPSQIRYVKYFERILMYFNGENQPGRRCMLRGFRLHRCPYWIRPSITVSDHNGVLFSSKK
HPRTKDLSPEDFWFNAPKKGVVVFALPGEPGLAELAGDFKIHFHDRQGDFYCWLNTTMIE
NRKVLMISDLDGFDKRKLPSPGFQVEVVLADYDAALPQSETATKESADSSSANTAPVSNP
TSGSEPADGSNMNQQPGNNDKDDVFSDNESEEPGMSKARQTKAASEVNAPADAKTPGSKN
KNDSDKISSLTHKTEQVSLGDTSSVHSEPKKDASVGATSSVDVSNPVGGVSDFKVMAADA
SVFSFGDEEDYESD*

Transcript Sequence

Transcript ID

PGSC0003DMT400066563
Transcript Infomation

pacid=37441334 locus=PGSC0003DMG401025870 ID=PGSC0003DMT400066563.v4.03 annot-version=v4.03
Sequence

ATGGATTCTGGATCTGCTGATGTATCAAATTCACAACCTGTTACAACATCAAGTGTAGCA
AAGTCTACTGCAGTGGAGTCTGCACCAGTTCAGTCAACAGAAGAGGCGCCTTCAAAGATT
TCTACTTCAGGCATCTCGTCATGGGCCAAAAATTTAAAAATTCCACAACCGTTTACTGGG
TCCCAAGATGAACAATCATCCGGAAATGCTCCCAAATCAACCTTTGCTCGTTTAACTGGT
GGGCTTGGAATGCGTCTGTCCCCTAAATCTCCTACATCTCCTACAGATGAACATCTTGAT
GGAACATCACCAACCAGTTTATTTGGAACATTCACCAAAGGATTGGTTGACTCTTCAAAG
AATGCAGTGAAGGCTGTGCAGGTTAAAGCGCGACATGTTGTATCCCAGAATAAGAGAAGA
TATCAGGAAGGAGGATTTGATTTAGACTTGACCTACATAACAGAGAATATAATTGCCATG
GGATTCCCTGCTGGTGACATGAGCTCTGGCCTTTTTGGCTATGTTGAGGGGTTCTACAGA
AACCACATGGAAGAAGTAATTAAATTCTTTGAAACTCATCATAAGGATAAATACAAAGTA
TACAATCTTTGTGCTGAAAGATTGTATGATGCTTCTCTATTTGAGGGGAAGGTTGCTAGT
TTCCCATTTGATGATCACAACTGCCCTCCTATTCAACTCATTATATCGTTTTGTCAAAGT
GCATACTCATGGTTGAAGGAGGATATCGAAAATGTTGTGGTTGTGCATTGTAAGGCGGGA
ATGGCAAGAACTGGTTTGATGATCTCTAGTCTTCTTCTATACTTGAAGTTCTTTCCTACA
GCAGAGGAGTCTATGGATTACTACAATCAAAAGAGATGCGTAGACGGAAAAGGACTAGTG
CTGCCGAGCCAGATTAGATATGTCAAGTATTTTGAACGCATCTTAATGTACTTTAATGGA
GAAAACCAGCCTGGACGCAGGTGCATGCTCAGAGGATTTCGCCTGCATAGGTGCCCTTAT
TGGATAAGACCTTCTATCACCGTATCTGATCATAATGGTGTGCTCTTTTCATCCAAAAAA
CATCCAAGAACCAAGGATCTATCGCCTGAGGATTTTTGGTTCAATGCACCAAAGAAAGGG
GTAGTGGTTTTTGCTCTTCCAGGCGAGCCTGGCCTTGCAGAATTAGCTGGGGATTTCAAA
ATTCATTTTCATGACCGTCAAGGAGACTTTTACTGTTGGTTGAATACAACAATGATAGAG
AACAGGAAAGTCCTGATGATAAGTGATCTTGATGGTTTTGACAAGAGAAAGTTACCATCA
CCTGGTTTCCAAGTGGAAGTAGTCCTTGCGGACTATGATGCTGCTCTTCCCCAATCAGAA
ACTGCCACCAAAGAATCAGCTGACAGTTCAAGTGCTAATACTGCCCCTGTGTCTAATCCT
ACCTCAGGCAGTGAGCCTGCTGATGGAAGTAACATGAACCAACAACCTGGGAACAATGAC
AAGGACGATGTGTTCTCAGACAATGAATCTGAGGAACCTGGAATGTCAAAAGCTAGACAA
ACTAAAGCTGCTTCTGAAGTTAATGCTCCTGCAGATGCAAAAACCCCTGGATCAAAGAAC
AAGAACGATTCAGATAAAATATCAAGCTTGACACATAAGACAGAACAAGTCTCATTGGGA
GACACAAGCTCTGTACACAGCGAGCCCAAAAAAGATGCCTCAGTCGGAGCTACGTCTAGT
GTTGATGTGTCCAATCCGGTTGGAGGAGTGAGTGATTTCAAGGTCATGGCAGCTGATGCA
TCTGTTTTCTCATTTGGTGATGAAGAAGATTATGAAAGTGACTAA