Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400066542
CDS Infomation

pacid=37439021 polypeptide=PGSC0003DMP400044860 locus=PGSC0003DMG400025860 ID=PGSC0003DMT400066542.v4.03 annot-version=v4.03
Sequence

ATGGATGTTTGGTCTTGGATATGTGAACTTCTTGACTCAGAAAAATGGAGTATCGAGAAT
GATGATTCCTTTCTCATTTATAATCTTGCTACTTCCATAACCAATTCCAGTCAGTCAATT
CAATTCAAAGCTGAGAAAAAACTTGACCCTAATAACACAGAGACAAATTCTTCATTGGTT
TTCTCTATATGTTTGTTGGGGTTTCATGACACCTCTCAAGAAGAGGTGACCATCTGGGTT
TCTGACACGTGTCCTCTTTCATCGGACAAGCCATTCTTGCCACTTGTTCTACAACTTCTT
CAAGAAATCATTTCACGTTCACCCACGGCGCATGATAGCGCATGCCCACGTTCCCACCTC
CAGAAGCTCCAACCCGACCCGGTTTCATGGATCCTCGATTCCCACTCACCGGAATCATTC
TCAAGCTTCTTCAATCTCATCTTCCTCACGCGACTTTTCTGGATGTTTGCATTCGACGCA
CCGGCGGCGGTGGGGTCTCTTTATTTCCACTCGCTGCTAGCTCCTAACCTTGAAGCCTTC
TCGTGCAAGCACGCGCCTGTCCTGCGAACCTTCTTTATAACAGTAGGGACTGACGTGGAA
CTTTGTTTCATGCGCACGTTTGGGTACATGTTAGCAAAATGGTTGATTTTAAGAGAAGTT
GGCGGCGTAGGATTAAAGTCGTTAACGCCGTTAGCATCTCATTACTTAGGATTTTCATAC
GCCACGGAGGCTCACGGGTTATGGATGTTAAAAGGATACGCGCCTGTAAAGGCAATGAAA
CCCACGCGCATGAATTTTGACAAATTTCAATTTCCTGTTATTGAAGCGAAAGAAATTGCA
CTAAAATATACACTGGCCCATCAACAGCTTGAGGCTGTGATACAGTTTGAATATACAGTT
GGATTCTATGATGGGTTTATCCAAGTTAGGGCCCGTTTGGATAACATACGTCTTGGTGTG
GCAAGATTGGGGTTTAACAAAAATGATGATGAAGAAGATTCTTATTTGCAAGAGAAGCAT
TTTCCATCTAGGATTCGAGTTTGGGTTGGGCCAGAAATTGGTGCTAATTATGTTGGCGGG
TTAAGTTTGGGCCGGTCCACTAACAACGTCGAACGCGAATTCGAAATGCAAAGAGTCTTA
AAGGGCAATTTCGGAAACTCAAAACAACCAGAAGTGAAGACAAGGGCAAAGATGGCAACA
AAATCAAAGATGAAAAATTGGAGGTGGGACCAAGAAGCGGAAGGGAATGCAGCTGTATAC
GAAGCGATATTATATGACCACGTGTCAGGGTGTGAGATCGCCACGTGGAAGCCGGTTAAC
GGGGATGATAAGAATAATCAACTTATGAACAATTTTAGAGGAAGATATTTTGGAGGGAAT
AGGGCATTTAGTAAGAAGGGTGGTTTGGTATTTGCTGGGGAGGAATGTGGTGAAGAAGTA
GGATGGAGATTGAGCAAAGAAATGGAAGGAAGTGTGTTGAAATGGAGAGTAGGGGGTCAA
GTATGGCTAAGTTATTGGCCAAATAATGTAAAAAGTTCATATTACGAGACTAGGCTTGTG
GAATGGTGTGATGAGGTAGATTTGCCTTTGATTCCTGGGAAAATATTTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400044860
PEP Infomation

pacid=37439021 transcript=PGSC0003DMT400066542 locus=PGSC0003DMG400025860 ID=PGSC0003DMT400066542.v4.03 annot-version=v4.03
Sequence

MDVWSWICELLDSEKWSIENDDSFLIYNLATSITNSSQSIQFKAEKKLDPNNTETNSSLV
FSICLLGFHDTSQEEVTIWVSDTCPLSSDKPFLPLVLQLLQEIISRSPTAHDSACPRSHL
QKLQPDPVSWILDSHSPESFSSFFNLIFLTRLFWMFAFDAPAAVGSLYFHSLLAPNLEAF
SCKHAPVLRTFFITVGTDVELCFMRTFGYMLAKWLILREVGGVGLKSLTPLASHYLGFSY
ATEAHGLWMLKGYAPVKAMKPTRMNFDKFQFPVIEAKEIALKYTLAHQQLEAVIQFEYTV
GFYDGFIQVRARLDNIRLGVARLGFNKNDDEEDSYLQEKHFPSRIRVWVGPEIGANYVGG
LSLGRSTNNVEREFEMQRVLKGNFGNSKQPEVKTRAKMATKSKMKNWRWDQEAEGNAAVY
EAILYDHVSGCEIATWKPVNGDDKNNQLMNNFRGRYFGGNRAFSKKGGLVFAGEECGEEV
GWRLSKEMEGSVLKWRVGGQVWLSYWPNNVKSSYYETRLVEWCDEVDLPLIPGKIF*

Transcript Sequence

Transcript ID

PGSC0003DMT400066542
Transcript Infomation

pacid=37439021 locus=PGSC0003DMG400025860 ID=PGSC0003DMT400066542.v4.03 annot-version=v4.03
Sequence

ATGGATGTTTGGTCTTGGATATGTGAACTTCTTGACTCAGAAAAATGGAGTATCGAGAAT
GATGATTCCTTTCTCATTTATAATCTTGCTACTTCCATAACCAATTCCAGTCAGTCAATT
CAATTCAAAGCTGAGAAAAAACTTGACCCTAATAACACAGAGACAAATTCTTCATTGGTT
TTCTCTATATGTTTGTTGGGGTTTCATGACACCTCTCAAGAAGAGGTGACCATCTGGGTT
TCTGACACGTGTCCTCTTTCATCGGACAAGCCATTCTTGCCACTTGTTCTACAACTTCTT
CAAGAAATCATTTCACGTTCACCCACGGCGCATGATAGCGCATGCCCACGTTCCCACCTC
CAGAAGCTCCAACCCGACCCGGTTTCATGGATCCTCGATTCCCACTCACCGGAATCATTC
TCAAGCTTCTTCAATCTCATCTTCCTCACGCGACTTTTCTGGATGTTTGCATTCGACGCA
CCGGCGGCGGTGGGGTCTCTTTATTTCCACTCGCTGCTAGCTCCTAACCTTGAAGCCTTC
TCGTGCAAGCACGCGCCTGTCCTGCGAACCTTCTTTATAACAGTAGGGACTGACGTGGAA
CTTTGTTTCATGCGCACGTTTGGGTACATGTTAGCAAAATGGTTGATTTTAAGAGAAGTT
GGCGGCGTAGGATTAAAGTCGTTAACGCCGTTAGCATCTCATTACTTAGGATTTTCATAC
GCCACGGAGGCTCACGGGTTATGGATGTTAAAAGGATACGCGCCTGTAAAGGCAATGAAA
CCCACGCGCATGAATTTTGACAAATTTCAATTTCCTGTTATTGAAGCGAAAGAAATTGCA
CTAAAATATACACTGGCCCATCAACAGCTTGAGGCTGTGATACAGTTTGAATATACAGTT
GGATTCTATGATGGGTTTATCCAAGTTAGGGCCCGTTTGGATAACATACGTCTTGGTGTG
GCAAGATTGGGGTTTAACAAAAATGATGATGAAGAAGATTCTTATTTGCAAGAGAAGCAT
TTTCCATCTAGGATTCGAGTTTGGGTTGGGCCAGAAATTGGTGCTAATTATGTTGGCGGG
TTAAGTTTGGGCCGGTCCACTAACAACGTCGAACGCGAATTCGAAATGCAAAGAGTCTTA
AAGGGCAATTTCGGAAACTCAAAACAACCAGAAGTGAAGACAAGGGCAAAGATGGCAACA
AAATCAAAGATGAAAAATTGGAGGTGGGACCAAGAAGCGGAAGGGAATGCAGCTGTATAC
GAAGCGATATTATATGACCACGTGTCAGGGTGTGAGATCGCCACGTGGAAGCCGGTTAAC
GGGGATGATAAGAATAATCAACTTATGAACAATTTTAGAGGAAGATATTTTGGAGGGAAT
AGGGCATTTAGTAAGAAGGGTGGTTTGGTATTTGCTGGGGAGGAATGTGGTGAAGAAGTA
GGATGGAGATTGAGCAAAGAAATGGAAGGAAGTGTGTTGAAATGGAGAGTAGGGGGTCAA
GTATGGCTAAGTTATTGGCCAAATAATGTAAAAAGTTCATATTACGAGACTAGGCTTGTG
GAATGGTGTGATGAGGTAGATTTGCCTTTGATTCCTGGGAAAATATTTTAG