Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400066534
CDS Infomation

pacid=37436777 polypeptide=PGSC0003DMP400044853 locus=PGSC0003DMG400025856 ID=PGSC0003DMT400066534.v4.03 annot-version=v4.03
Sequence

ATGTACACTCAAATGCTCTGCGGTCTCTATGAGCGCGAGCAAGTTCTTCGCCTCGGCGCT
GTTTTTGCCTCGGGCCTTGTCCGAGCCATTCGGTTCTTGCAGCTCCACTGGGAGCAACTT
GCTCATGACATTCGAACTGGAACTCTGAACACACTAATTACCAACCCTTCTGTTTGCGAA
CGGATGGGTAAAATCATGAAACCGAATCCAGAGCTAGCGGATTTTGTTGCAAATGAATGT
TGTAAGGAAAATTGGGAAGGAATTATCACGAGGATTTGGCCTAAGACGAAGTACCTTGAC
GTTATCGTCACGGGTGCTATGGCTCAGTACATTCCTACGCTGGATTATTACAGTGGTGGA
TTACCAAAAGCGTGTACTATGTACGCAGCTTCCGAGTGTTACTTTGGGCTTAATTTAAAT
CCCATGTGTAAGCCCTCGGAAGTTTCCTACACCATCATGCCAAACATGGGTTATTTTGAA
TTTTTACCCCATGACCCTACATCAACAACAACTTCCTCACCTACCAATCTCGTTGACCTT
GTCGACGTTGAAGTTGGAAAAGAGTACGAGCTCGTAATCACGACGTACGCCGGATTATAC
CGTTACAGAGTCGGAGACATTCTCCGAGTCACCGGATTTCACAACTCAGCCCCGCAGTTC
CATTTCGTCCGGAGAAAAAATGTTTTATTGAGCATTGACTCGGACAAAACTGATGAGGCT
GAGTTACAGAGAGCCGTAGAGAATGCTTCGAAATTACTCAGGGAGTTCAACACCAGCGTT
GTCGAGTACACTAGTTATGCAGATACGAAGACAATTCCAGGACATTACGTGATTTATTGG
GAGTTATTAATGAAGGATTTGAACAATTCTCCAAGTGATGAAGTATTGAACCAATGTTGT
TTAGCGATGGAAGAGTCACTCAACACAGTGTATCGACAAGGGCGAGTTGCTTGTAACTCA
ATTGGTCCACTGGAAATTCGAGTGGTGAAAAATGGGACATTTGAAGAATTAATGGATTAT
GCAATTTCAAGAGGTGCTTCAATTAACCAATATAAGGTGCCTAGATGTGTGAATTTTGCA
CCTATTTTGGAACTTCTTGACTCAAGAGTAATGTCAAGACACTTTAGCCCATCCTTGCCT
CAATGGACACCTGAACGACGTCGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400044853
PEP Infomation

pacid=37436777 transcript=PGSC0003DMT400066534 locus=PGSC0003DMG400025856 ID=PGSC0003DMT400066534.v4.03 annot-version=v4.03
Sequence

MYTQMLCGLYEREQVLRLGAVFASGLVRAIRFLQLHWEQLAHDIRTGTLNTLITNPSVCE
RMGKIMKPNPELADFVANECCKENWEGIITRIWPKTKYLDVIVTGAMAQYIPTLDYYSGG
LPKACTMYAASECYFGLNLNPMCKPSEVSYTIMPNMGYFEFLPHDPTSTTTSSPTNLVDL
VDVEVGKEYELVITTYAGLYRYRVGDILRVTGFHNSAPQFHFVRRKNVLLSIDSDKTDEA
ELQRAVENASKLLREFNTSVVEYTSYADTKTIPGHYVIYWELLMKDLNNSPSDEVLNQCC
LAMEESLNTVYRQGRVACNSIGPLEIRVVKNGTFEELMDYAISRGASINQYKVPRCVNFA
PILELLDSRVMSRHFSPSLPQWTPERRR*

Transcript Sequence

Transcript ID

PGSC0003DMT400066534
Transcript Infomation

pacid=37436777 locus=PGSC0003DMG400025856 ID=PGSC0003DMT400066534.v4.03 annot-version=v4.03
Sequence

ATGTACACTCAAATGCTCTGCGGTCTCTATGAGCGCGAGCAAGTTCTTCGCCTCGGCGCT
GTTTTTGCCTCGGGCCTTGTCCGAGCCATTCGGTTCTTGCAGCTCCACTGGGAGCAACTT
GCTCATGACATTCGAACTGGAACTCTGAACACACTAATTACCAACCCTTCTGTTTGCGAA
CGGATGGGTAAAATCATGAAACCGAATCCAGAGCTAGCGGATTTTGTTGCAAATGAATGT
TGTAAGGAAAATTGGGAAGGAATTATCACGAGGATTTGGCCTAAGACGAAGTACCTTGAC
GTTATCGTCACGGGTGCTATGGCTCAGTACATTCCTACGCTGGATTATTACAGTGGTGGA
TTACCAAAAGCGTGTACTATGTACGCAGCTTCCGAGTGTTACTTTGGGCTTAATTTAAAT
CCCATGTGTAAGCCCTCGGAAGTTTCCTACACCATCATGCCAAACATGGGTTATTTTGAA
TTTTTACCCCATGACCCTACATCAACAACAACTTCCTCACCTACCAATCTCGTTGACCTT
GTCGACGTTGAAGTTGGAAAAGAGTACGAGCTCGTAATCACGACGTACGCCGGATTATAC
CGTTACAGAGTCGGAGACATTCTCCGAGTCACCGGATTTCACAACTCAGCCCCGCAGTTC
CATTTCGTCCGGAGAAAAAATGTTTTATTGAGCATTGACTCGGACAAAACTGATGAGGCT
GAGTTACAGAGAGCCGTAGAGAATGCTTCGAAATTACTCAGGGAGTTCAACACCAGCGTT
GTCGAGTACACTAGTTATGCAGATACGAAGACAATTCCAGGACATTACGTGATTTATTGG
GAGTTATTAATGAAGGATTTGAACAATTCTCCAAGTGATGAAGTATTGAACCAATGTTGT
TTAGCGATGGAAGAGTCACTCAACACAGTGTATCGACAAGGGCGAGTTGCTTGTAACTCA
ATTGGTCCACTGGAAATTCGAGTGGTGAAAAATGGGACATTTGAAGAATTAATGGATTAT
GCAATTTCAAGAGGTGCTTCAATTAACCAATATAAGGTGCCTAGATGTGTGAATTTTGCA
CCTATTTTGGAACTTCTTGACTCAAGAGTAATGTCAAGACACTTTAGCCCATCCTTGCCT
CAATGGACACCTGAACGACGTCGTTGA