Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400066507
CDS Infomation

pacid=37438761 polypeptide=PGSC0003DMP400044835 locus=PGSC0003DMG400025843 ID=PGSC0003DMT400066507.v4.03 annot-version=v4.03
Sequence

ATGGCCTCCAAGGTATCCATCATTTCAACATGGACAGTTAAAGCTGCTGGAGGGAGTCAG
CACCATACGGATAATTGTAAGATTATTGAGTTGACACCATGGGACATTCTTGCCCTTCAA
ATTGACTATGCTCAAAGTGGACTCCTCTATCCCATGCCTACATTGGAACAAGTAAGAGAT
GTATCAAAATCAACCAATACTACTTCCTTAATTGATCATCTTAGAGTTTCACTATCCCGT
GCTTTAGATTTCTACCCTCCATTCTGTGGCCGCCTTGAGGCAATCACAGAACAGCGTGGA
ACCACTTCTTTCGTCATTAACTGTAACAATGCTGGCGTTCAATTCAACCATGCGATAGCT
GATGGTGTTACAATTCGTGACATCATGGAATCAAATTGCGTTCCTCATGTGGTACGTGAT
TTCTTTTCACTAAATGGAGTCCAAAACCAAGAGGCTATCTCCCAATTACCTTGTTTGGCT
GTGCAAGTAACAGAGCTTGTGGATGGCATTTTCATTGGCAGCACATGTAATCACGTGGTA
GTCGATGGAACTTCTTTTTGGAATTTTTACAATTCTTGGGCTGAGTTATCTCGCGGTTCT
AATGTCATCTCAAAAATCCCCTTTTTGAAACGTGAATTCCCTTTCAAAATTGACCGTTTT
TCTAATCGGATTTCTATACCAAATGAAATGGTAAATTCAAGTGACAAATTCATACCACCA
GCAGTACAAATGCTGCGAGAAAAGGTATTTCACTTTACCAAAGAAAATGTCTCCAAGTTA
AAAGCAACGGCCAATCATGAAATGAACACCACAAAGATTTCTTCTCTTCAAGCTGTGTTG
GCTCACGTTTGGCGATCCGTGATACGTTGTCGTCGTCTCGATCACAACCAAGAAACTACT
TTTGAGGTATCCATTAACATGAGGGAAAAACTGAATCCTCCATTACCAGAAGGGTACTTT
GGGAATGCAATTTACCCTGTTACCATAAAGATCAAAACGGGAGAACTGCTGGAGCACGGA
TTCGGATGGGCTGCTTTGCAAATTAATGAGTCGATTGCTTCCCATGACCATGAAAAGTTG
AAGTGCATATACGAGAATTGGATGAAGGACCCTGAGGTACAAAAATTGGGTGATTTGCCA
AGCAATTACTTCATGCTGCATAACTCTCCGCGATTCGATTTTTTCAAGTATGATTTTGGT
TGGGGAAAGCCAATTGCACATAGAAGTGGGGTGGGAAACATGTTAGATGGGAAAATAACA
GTGTCACCAGGACTAGAAGAAGGGAGCATAATTGTTGAAATTTGCCTTTCTTCAGAGACA
ATACAAGCATTGGAGAAAGACATAATATTTGGGGAGTTTATGAATAGTACACCAATTGTT
AGTGTGGATCGAACAATGCGAGCTCGTATTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400044835
PEP Infomation

pacid=37438761 transcript=PGSC0003DMT400066507 locus=PGSC0003DMG400025843 ID=PGSC0003DMT400066507.v4.03 annot-version=v4.03
Sequence

MASKVSIISTWTVKAAGGSQHHTDNCKIIELTPWDILALQIDYAQSGLLYPMPTLEQVRD
VSKSTNTTSLIDHLRVSLSRALDFYPPFCGRLEAITEQRGTTSFVINCNNAGVQFNHAIA
DGVTIRDIMESNCVPHVVRDFFSLNGVQNQEAISQLPCLAVQVTELVDGIFIGSTCNHVV
VDGTSFWNFYNSWAELSRGSNVISKIPFLKREFPFKIDRFSNRISIPNEMVNSSDKFIPP
AVQMLREKVFHFTKENVSKLKATANHEMNTTKISSLQAVLAHVWRSVIRCRRLDHNQETT
FEVSINMREKLNPPLPEGYFGNAIYPVTIKIKTGELLEHGFGWAALQINESIASHDHEKL
KCIYENWMKDPEVQKLGDLPSNYFMLHNSPRFDFFKYDFGWGKPIAHRSGVGNMLDGKIT
VSPGLEEGSIIVEICLSSETIQALEKDIIFGEFMNSTPIVSVDRTMRARI*

Transcript Sequence

Transcript ID

PGSC0003DMT400066507
Transcript Infomation

pacid=37438761 locus=PGSC0003DMG400025843 ID=PGSC0003DMT400066507.v4.03 annot-version=v4.03
Sequence

ATGGCCTCCAAGGTATCCATCATTTCAACATGGACAGTTAAAGCTGCTGGAGGGAGTCAG
CACCATACGGATAATTGTAAGATTATTGAGTTGACACCATGGGACATTCTTGCCCTTCAA
ATTGACTATGCTCAAAGTGGACTCCTCTATCCCATGCCTACATTGGAACAAGTAAGAGAT
GTATCAAAATCAACCAATACTACTTCCTTAATTGATCATCTTAGAGTTTCACTATCCCGT
GCTTTAGATTTCTACCCTCCATTCTGTGGCCGCCTTGAGGCAATCACAGAACAGCGTGGA
ACCACTTCTTTCGTCATTAACTGTAACAATGCTGGCGTTCAATTCAACCATGCGATAGCT
GATGGTGTTACAATTCGTGACATCATGGAATCAAATTGCGTTCCTCATGTGGTACGTGAT
TTCTTTTCACTAAATGGAGTCCAAAACCAAGAGGCTATCTCCCAATTACCTTGTTTGGCT
GTGCAAGTAACAGAGCTTGTGGATGGCATTTTCATTGGCAGCACATGTAATCACGTGGTA
GTCGATGGAACTTCTTTTTGGAATTTTTACAATTCTTGGGCTGAGTTATCTCGCGGTTCT
AATGTCATCTCAAAAATCCCCTTTTTGAAACGTGAATTCCCTTTCAAAATTGACCGTTTT
TCTAATCGGATTTCTATACCAAATGAAATGGTAAATTCAAGTGACAAATTCATACCACCA
GCAGTACAAATGCTGCGAGAAAAGGTATTTCACTTTACCAAAGAAAATGTCTCCAAGTTA
AAAGCAACGGCCAATCATGAAATGAACACCACAAAGATTTCTTCTCTTCAAGCTGTGTTG
GCTCACGTTTGGCGATCCGTGATACGTTGTCGTCGTCTCGATCACAACCAAGAAACTACT
TTTGAGGTATCCATTAACATGAGGGAAAAACTGAATCCTCCATTACCAGAAGGGTACTTT
GGGAATGCAATTTACCCTGTTACCATAAAGATCAAAACGGGAGAACTGCTGGAGCACGGA
TTCGGATGGGCTGCTTTGCAAATTAATGAGTCGATTGCTTCCCATGACCATGAAAAGTTG
AAGTGCATATACGAGAATTGGATGAAGGACCCTGAGGTACAAAAATTGGGTGATTTGCCA
AGCAATTACTTCATGCTGCATAACTCTCCGCGATTCGATTTTTTCAAGTATGATTTTGGT
TGGGGAAAGCCAATTGCACATAGAAGTGGGGTGGGAAACATGTTAGATGGGAAAATAACA
GTGTCACCAGGACTAGAAGAAGGGAGCATAATTGTTGAAATTTGCCTTTCTTCAGAGACA
ATACAAGCATTGGAGAAAGACATAATATTTGGGGAGTTTATGAATAGTACACCAATTGTT
AGTGTGGATCGAACAATGCGAGCTCGTATTTAA