Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400066505
CDS Infomation

pacid=37439264 polypeptide=PGSC0003DMP400044834 locus=PGSC0003DMG400025842 ID=PGSC0003DMT400066505.v4.03 annot-version=v4.03
Sequence

ATGGCCTCCAAGGTATCCATCATTTCAACATGCACAGTCAAAGCTGCTGGAAGAAGTCAG
CACCATCCAGATAATTGTAAAATTATTGAGTTGACACCATGGGACATTTATGAGCTTCAA
ATTGAATACTTTCAAAATGGACTCCTCTTCCTCATGCCTACATTTGAACAAGTAAGAGAT
TTATCAAAAACAACAAATACTAGTTCATTAATTGATCATCTTAGAGTATCACTATCTCGA
ACTTTAGATTTCTTCCCTCCATTCTGCGGCCGCCTTGAGGCAGCCCCAGAAGAGAAGAGT
GGAACCACTTCTTTCTTCGTTAACTGTAACAATGTCGGTGTGCAATTCAACCATGCGATA
GCTGATGGTGTTACAGTTGGCGACATTATGGAATCAAATGTGGTTCCTCATGTGGTACAC
GATTTCTTCCCACTAAGTGGAGTCCAAAACACAGAGGCTACCTCCCAACCATTTTTAGCT
GTGCAAGTAACAGAGCTTGTGGATGGCATTTTCATTGGCTGCGCAAACAATCACGCATTA
GTTGATGGAACATCCTTTTGGCATTTTTACAATTCTTGGGCTGAGGTATCTCGTGGTTTT
AATGTCATCTCAAAAATTCCCTATTTGAAACGTAAATTTCCTTTCAAAATTGACCATTTC
TCTGATCGCATTTCTATACCGAATGAAAGAATCAATTCAGGTGATAAGTTCATTCCACCA
GCGCTACAAATGCTGCGAGAAAAGTTATTTCACTTTAGCAAAGAAAATGTGTCCAAGCTA
AAAGCAAAGGCCAATCATGAAATGAACACCAGCAAGATTTCTTCTCTTCAAGCTGTAGTG
ACTCACGTTTGGCTATCCGTGATACGCTGTCGTCGTCTTGATCACAGCGAAGAAACTACT
TTTGAGGTATCCATTGACATGAGGAGGAAAAGATTGAATCCTCCATTGCCTGAAGGGTTC
TTTGGGAATGCAATTTACCCTGCACCCACAACTATCAAGACGGGAGAGCTGCTCGAGCAC
GGATTTGGATGGGCTGCTTTACAAATTAATAAGACGATTGCTTCCCATGACCATGAAAAG
TTGAAGTGCATATATGAGAATTGGATGAACGACCCTGAGGTACCAAAATTGGGCGATTTG
CCAAGCAATTACTTTATGCTGAACGGCTCTCCGCAATTCGATTTTTATAAGTATGATTTT
GGTTGGGGACAGCCTATTGCACATAGAAGTGGGGTGGGAAACATGTTAGATGGGAAAATA
ACAGTGTCACCTGGGCTAGAAGAAGGGAGTATGATTCTTGAAATTTGCCTTTCTTCAGAG
ACAATACAAGCATTGGTGGAAGATATAATATTTGGGGAGTTTGTGAACACTACACCAATT
GTTGGTGTGGAACGAACAATTCGACCTCGTATTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400044834
PEP Infomation

pacid=37439264 transcript=PGSC0003DMT400066505 locus=PGSC0003DMG400025842 ID=PGSC0003DMT400066505.v4.03 annot-version=v4.03
Sequence

MASKVSIISTCTVKAAGRSQHHPDNCKIIELTPWDIYELQIEYFQNGLLFLMPTFEQVRD
LSKTTNTSSLIDHLRVSLSRTLDFFPPFCGRLEAAPEEKSGTTSFFVNCNNVGVQFNHAI
ADGVTVGDIMESNVVPHVVHDFFPLSGVQNTEATSQPFLAVQVTELVDGIFIGCANNHAL
VDGTSFWHFYNSWAEVSRGFNVISKIPYLKRKFPFKIDHFSDRISIPNERINSGDKFIPP
ALQMLREKLFHFSKENVSKLKAKANHEMNTSKISSLQAVVTHVWLSVIRCRRLDHSEETT
FEVSIDMRRKRLNPPLPEGFFGNAIYPAPTTIKTGELLEHGFGWAALQINKTIASHDHEK
LKCIYENWMNDPEVPKLGDLPSNYFMLNGSPQFDFYKYDFGWGQPIAHRSGVGNMLDGKI
TVSPGLEEGSMILEICLSSETIQALVEDIIFGEFVNTTPIVGVERTIRPRI*

Transcript Sequence

Transcript ID

PGSC0003DMT400066505
Transcript Infomation

pacid=37439264 locus=PGSC0003DMG400025842 ID=PGSC0003DMT400066505.v4.03 annot-version=v4.03
Sequence

ATGGCCTCCAAGGTATCCATCATTTCAACATGCACAGTCAAAGCTGCTGGAAGAAGTCAG
CACCATCCAGATAATTGTAAAATTATTGAGTTGACACCATGGGACATTTATGAGCTTCAA
ATTGAATACTTTCAAAATGGACTCCTCTTCCTCATGCCTACATTTGAACAAGTAAGAGAT
TTATCAAAAACAACAAATACTAGTTCATTAATTGATCATCTTAGAGTATCACTATCTCGA
ACTTTAGATTTCTTCCCTCCATTCTGCGGCCGCCTTGAGGCAGCCCCAGAAGAGAAGAGT
GGAACCACTTCTTTCTTCGTTAACTGTAACAATGTCGGTGTGCAATTCAACCATGCGATA
GCTGATGGTGTTACAGTTGGCGACATTATGGAATCAAATGTGGTTCCTCATGTGGTACAC
GATTTCTTCCCACTAAGTGGAGTCCAAAACACAGAGGCTACCTCCCAACCATTTTTAGCT
GTGCAAGTAACAGAGCTTGTGGATGGCATTTTCATTGGCTGCGCAAACAATCACGCATTA
GTTGATGGAACATCCTTTTGGCATTTTTACAATTCTTGGGCTGAGGTATCTCGTGGTTTT
AATGTCATCTCAAAAATTCCCTATTTGAAACGTAAATTTCCTTTCAAAATTGACCATTTC
TCTGATCGCATTTCTATACCGAATGAAAGAATCAATTCAGGTGATAAGTTCATTCCACCA
GCGCTACAAATGCTGCGAGAAAAGTTATTTCACTTTAGCAAAGAAAATGTGTCCAAGCTA
AAAGCAAAGGCCAATCATGAAATGAACACCAGCAAGATTTCTTCTCTTCAAGCTGTAGTG
ACTCACGTTTGGCTATCCGTGATACGCTGTCGTCGTCTTGATCACAGCGAAGAAACTACT
TTTGAGGTATCCATTGACATGAGGAGGAAAAGATTGAATCCTCCATTGCCTGAAGGGTTC
TTTGGGAATGCAATTTACCCTGCACCCACAACTATCAAGACGGGAGAGCTGCTCGAGCAC
GGATTTGGATGGGCTGCTTTACAAATTAATAAGACGATTGCTTCCCATGACCATGAAAAG
TTGAAGTGCATATATGAGAATTGGATGAACGACCCTGAGGTACCAAAATTGGGCGATTTG
CCAAGCAATTACTTTATGCTGAACGGCTCTCCGCAATTCGATTTTTATAAGTATGATTTT
GGTTGGGGACAGCCTATTGCACATAGAAGTGGGGTGGGAAACATGTTAGATGGGAAAATA
ACAGTGTCACCTGGGCTAGAAGAAGGGAGTATGATTCTTGAAATTTGCCTTTCTTCAGAG
ACAATACAAGCATTGGTGGAAGATATAATATTTGGGGAGTTTGTGAACACTACACCAATT
GTTGGTGTGGAACGAACAATTCGACCTCGTATTTAA