Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400066392
CDS Infomation

pacid=37438692 polypeptide=PGSC0003DMP400044755 locus=PGSC0003DMG400025819 ID=PGSC0003DMT400066392.v4.03 annot-version=v4.03
Sequence

ATGGAGGAAATAGTGCATGATTTTTTCCCATTCATGAGAGTTTACAAAGATGGTCGAATC
GTAAGGCTGATGGGCGAAGGTTTTGTGCCACCTGAATCTGATCCTGAAACTGGAGTACAA
ATCAAAGACGTTGAAATTGATCCACAAATTAACCTATCAGCAAGACTCTACCTGCCCAAA
AATGTCGACTCTGTTCAGAAAATTCCCCTTTTTGTCTACTTTCACGGCGGTGGTTTTGTG
ATCGAATCTGCTTCTTCACCTTCATATCACAAGCATATAAGCAAGGTAGCAGCTGAAGCA
AAAGTAGTTATTGTTTCTGTTAACTACAGGTTAGCTCCTGAGTACCTTTTACCCATAGCT
TATGAAGATTCCTGGCTAGCTCTCAAATGGGTTGCTTCACATATTGCCAATGGTGATGGT
GATGAGCCATGGCTAAAAGACCATGCCGATTTCAATCGCGTCTATTTAGGGGGAGATAGC
GCGGGTGGTAACATCGCACACCATATAGCTATTCGGGTCGGGTTGGAAAAGTTGGATGGT
ATGAAACTTGAAGGGATTTTCCTTGCCTGTCCATTTTTCTGGGGGAAGGATCCTATTGAC
GGTGAGGGAGAAAACTTAGGTTCCAAGGATGTCATTGAGAAGCTATGGTTGTTTGTGAAT
CCCAACAGCTCGGGATTAGATGACCCGTTGATTAACCCGGAAAAGGATCCGAAGTTGTGT
AGCTTAGGATGTGATAAAGTACTTGTGTATGTTGCCGGAAAAGATACATTGAGATTCAGG
GGATTTTACTATAAGGAGGTGTTGGAGAAGAGTGGGTGGCCGGGAACGGTGGAGATTGTG
GAGGTTAAAGATGAGGCACATGTGTTTTACCTGTCTGCTACAGAAGCTGAAAATGCCATG
GCAATGATAAAAAAATTGGCCTCTTTCCTTAATCAGTCCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400044755
PEP Infomation

pacid=37438692 transcript=PGSC0003DMT400066392 locus=PGSC0003DMG400025819 ID=PGSC0003DMT400066392.v4.03 annot-version=v4.03
Sequence

MEEIVHDFFPFMRVYKDGRIVRLMGEGFVPPESDPETGVQIKDVEIDPQINLSARLYLPK
NVDSVQKIPLFVYFHGGGFVIESASSPSYHKHISKVAAEAKVVIVSVNYRLAPEYLLPIA
YEDSWLALKWVASHIANGDGDEPWLKDHADFNRVYLGGDSAGGNIAHHIAIRVGLEKLDG
MKLEGIFLACPFFWGKDPIDGEGENLGSKDVIEKLWLFVNPNSSGLDDPLINPEKDPKLC
SLGCDKVLVYVAGKDTLRFRGFYYKEVLEKSGWPGTVEIVEVKDEAHVFYLSATEAENAM
AMIKKLASFLNQS*

Transcript Sequence

Transcript ID

PGSC0003DMT400066392
Transcript Infomation

pacid=37438692 locus=PGSC0003DMG400025819 ID=PGSC0003DMT400066392.v4.03 annot-version=v4.03
Sequence

ATGGAGGAAATAGTGCATGATTTTTTCCCATTCATGAGAGTTTACAAAGATGGTCGAATC
GTAAGGCTGATGGGCGAAGGTTTTGTGCCACCTGAATCTGATCCTGAAACTGGAGTACAA
ATCAAAGACGTTGAAATTGATCCACAAATTAACCTATCAGCAAGACTCTACCTGCCCAAA
AATGTCGACTCTGTTCAGAAAATTCCCCTTTTTGTCTACTTTCACGGCGGTGGTTTTGTG
ATCGAATCTGCTTCTTCACCTTCATATCACAAGCATATAAGCAAGGTAGCAGCTGAAGCA
AAAGTAGTTATTGTTTCTGTTAACTACAGGTTAGCTCCTGAGTACCTTTTACCCATAGCT
TATGAAGATTCCTGGCTAGCTCTCAAATGGGTTGCTTCACATATTGCCAATGGTGATGGT
GATGAGCCATGGCTAAAAGACCATGCCGATTTCAATCGCGTCTATTTAGGGGGAGATAGC
GCGGGTGGTAACATCGCACACCATATAGCTATTCGGGTCGGGTTGGAAAAGTTGGATGGT
ATGAAACTTGAAGGGATTTTCCTTGCCTGTCCATTTTTCTGGGGGAAGGATCCTATTGAC
GGTGAGGGAGAAAACTTAGGTTCCAAGGATGTCATTGAGAAGCTATGGTTGTTTGTGAAT
CCCAACAGCTCGGGATTAGATGACCCGTTGATTAACCCGGAAAAGGATCCGAAGTTGTGT
AGCTTAGGATGTGATAAAGTACTTGTGTATGTTGCCGGAAAAGATACATTGAGATTCAGG
GGATTTTACTATAAGGAGGTGTTGGAGAAGAGTGGGTGGCCGGGAACGGTGGAGATTGTG
GAGGTTAAAGATGAGGCACATGTGTTTTACCTGTCTGCTACAGAAGCTGAAAATGCCATG
GCAATGATAAAAAAATTGGCCTCTTTCCTTAATCAGTCCTAG