Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400066386
CDS Infomation

pacid=37436501 polypeptide=PGSC0003DMP400044752 locus=PGSC0003DMG400025816 ID=PGSC0003DMT400066386.v4.03 annot-version=v4.03
Sequence

ATGGCGGAAATAGTACATGATTTTTTCCCATTGATGAGAGTTTACAAAGATGGTCGAATC
GAAAGGCTGATGGGCGAGGGTTTTGTCCCACCTGAATTGGATCCTGAAACTGGAGTACAA
ATCAAAGACATTGAAATTGATCCAGAAATTAACCTATCAGCAAGACTCTACCTGCCCAAA
AATGTCGACACCGTTCAGAAAATTCCCCTTTTCGTCTACTTTCACGGCGGTGGCTTTGTG
ATCGAATCTGCTTCTTCACCTTCATATCACAAGCATCTTAGCACGGTAGCAGCTGAAGCA
AAAGTCGTCATCGTTTCTGTTAACTACAGGTTAGCTCCTGAGTACCCGTTACCCATAGCT
TATGAAGATACATGGTTAGCTCTGAAATGGGTCGCTTCACATGCTAATGGTGATGGCCAT
GAGCCATGGCTAAAAGACCATGCCGATTTCAATCGGGTTTATTTTGGGGGAGATAGCGCG
GGTGGTAACATCGCACACCATATAGCAATTCGGGTCGGGTTGGAAAAGTTGGATGGTGTG
AAACTTGAAGGGATTTTCCTTGCCTGTCCATTTTTCTGGGGGAAGGATCCGATTGACGGT
GAGGGGGAAAACCTGGGTGCCAAGGATTTCGTTGAGAAGCTATGGTTGTTTGCGAATCCG
AATAGCTCGGGATTAGATGACCCGTTGATTAACCCGGAGAAGGATCCGAAATTGTCTAGC
TTAGGATGTGATAAAGTACTTGTGTATGTGGCTGGAAAAGATCCGTTGAGATTCAGGGGA
TTTTACTACAAGGAGGTATTGGAGAAGAATGGGTGGCCGGGGACGGTGGAGGTTGTGGAA
GTTAAAGATGAAGAACATGTGTTTCACCTGTTTGCTACAGAAGCTGAAAATGCGATGGGC
ATGATGAAAAAATTGGTCTCTTTCCTTAATCAGTCCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400044752
PEP Infomation

pacid=37436501 transcript=PGSC0003DMT400066386 locus=PGSC0003DMG400025816 ID=PGSC0003DMT400066386.v4.03 annot-version=v4.03
Sequence

MAEIVHDFFPLMRVYKDGRIERLMGEGFVPPELDPETGVQIKDIEIDPEINLSARLYLPK
NVDTVQKIPLFVYFHGGGFVIESASSPSYHKHLSTVAAEAKVVIVSVNYRLAPEYPLPIA
YEDTWLALKWVASHANGDGHEPWLKDHADFNRVYFGGDSAGGNIAHHIAIRVGLEKLDGV
KLEGIFLACPFFWGKDPIDGEGENLGAKDFVEKLWLFANPNSSGLDDPLINPEKDPKLSS
LGCDKVLVYVAGKDPLRFRGFYYKEVLEKNGWPGTVEVVEVKDEEHVFHLFATEAENAMG
MMKKLVSFLNQS*

Transcript Sequence

Transcript ID

PGSC0003DMT400066386
Transcript Infomation

pacid=37436501 locus=PGSC0003DMG400025816 ID=PGSC0003DMT400066386.v4.03 annot-version=v4.03
Sequence

ATGGCGGAAATAGTACATGATTTTTTCCCATTGATGAGAGTTTACAAAGATGGTCGAATC
GAAAGGCTGATGGGCGAGGGTTTTGTCCCACCTGAATTGGATCCTGAAACTGGAGTACAA
ATCAAAGACATTGAAATTGATCCAGAAATTAACCTATCAGCAAGACTCTACCTGCCCAAA
AATGTCGACACCGTTCAGAAAATTCCCCTTTTCGTCTACTTTCACGGCGGTGGCTTTGTG
ATCGAATCTGCTTCTTCACCTTCATATCACAAGCATCTTAGCACGGTAGCAGCTGAAGCA
AAAGTCGTCATCGTTTCTGTTAACTACAGGTTAGCTCCTGAGTACCCGTTACCCATAGCT
TATGAAGATACATGGTTAGCTCTGAAATGGGTCGCTTCACATGCTAATGGTGATGGCCAT
GAGCCATGGCTAAAAGACCATGCCGATTTCAATCGGGTTTATTTTGGGGGAGATAGCGCG
GGTGGTAACATCGCACACCATATAGCAATTCGGGTCGGGTTGGAAAAGTTGGATGGTGTG
AAACTTGAAGGGATTTTCCTTGCCTGTCCATTTTTCTGGGGGAAGGATCCGATTGACGGT
GAGGGGGAAAACCTGGGTGCCAAGGATTTCGTTGAGAAGCTATGGTTGTTTGCGAATCCG
AATAGCTCGGGATTAGATGACCCGTTGATTAACCCGGAGAAGGATCCGAAATTGTCTAGC
TTAGGATGTGATAAAGTACTTGTGTATGTGGCTGGAAAAGATCCGTTGAGATTCAGGGGA
TTTTACTACAAGGAGGTATTGGAGAAGAATGGGTGGCCGGGGACGGTGGAGGTTGTGGAA
GTTAAAGATGAAGAACATGTGTTTCACCTGTTTGCTACAGAAGCTGAAAATGCGATGGGC
ATGATGAAAAAATTGGTCTCTTTCCTTAATCAGTCCTAG