Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400066343
CDS Infomation

pacid=37437535 polypeptide=PGSC0003DMP400044718 locus=PGSC0003DMG400025797 ID=PGSC0003DMT400066343.v4.03 annot-version=v4.03
Sequence

ATGCATTGGTTAAATAAGAGATTTAGACCGACTTCGAATTTGAATTCGAATTCCCTCCAA
AATAACAATCAATTTCAGCAGCAGCAACCAAGGCTTACTGGAGATGAAGAGTACTCTGTT
ATGGTTGCAACTCTGAAAAATGTCATCAATGGTAATATTCCAGTGCAAAACAATCAAGAA
TTCAATGTCTTTTCGCCATACAATTATTCTACTGCCACCACTACAACCACCACCACGACT
GTTACTTCCTCATCTTCGCCTTCTACTAGTATGTCCACGAGTTTCGAACAAGTATTGGGT
GTCCCTGCAGAACAAGAACCTTGTCAATTTTGCAGAATTCAAGGTTGTTTAGGCTGCGAC
ATTTTTGGTACCACATTTTCTTCTTCTTCTTCTTCTGCGCCCGCTGCTGTGGCTGCTCCT
ATTGCTGATAATAAGAAGAAGGGTAGTAGTACTACTACAGTCGCGATCGCAAAGAAAAAG
AAGAAGAATTACAGAGGAGTGAGACAGAGGCCATGGGGGAAATGGGCAGCAGAAATTCGT
GATCCTCGAAAAGCTGCACGTGTTTGGCTGGGAACTTTCACTACGGCAGAAGAAGCAGCT
AGAGCTTATGACAAAGCCGCCATTGAATTCAGGGGTCCACGAGCTAAATTGAATTTTTCA
TTTGCAGATTATACTGTTGACACTCAAGAACAACAGAGCACTTTATCTTCTTCACCACAA
CAATTACCAGAAGAGCCTCAGCAATCGCAGACAGCGAATAATAATTCGGATTTTGGAAAT
GAAATTTGGGATCAGTTGATGGGTGACAATGAAATTCAAGATTGGTTGACCATGATGAAT
TTCAATGGCGACTCTTCTGATTCTGGCGGGAATGTTCACAGCTTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400044718
PEP Infomation

pacid=37437535 transcript=PGSC0003DMT400066343 locus=PGSC0003DMG400025797 ID=PGSC0003DMT400066343.v4.03 annot-version=v4.03
Sequence

MHWLNKRFRPTSNLNSNSLQNNNQFQQQQPRLTGDEEYSVMVATLKNVINGNIPVQNNQE
FNVFSPYNYSTATTTTTTTTVTSSSSPSTSMSTSFEQVLGVPAEQEPCQFCRIQGCLGCD
IFGTTFSSSSSSAPAAVAAPIADNKKKGSSTTTVAIAKKKKKNYRGVRQRPWGKWAAEIR
DPRKAARVWLGTFTTAEEAARAYDKAAIEFRGPRAKLNFSFADYTVDTQEQQSTLSSSPQ
QLPEEPQQSQTANNNSDFGNEIWDQLMGDNEIQDWLTMMNFNGDSSDSGGNVHSF*

Transcript Sequence

Transcript ID

PGSC0003DMT400066343
Transcript Infomation

pacid=37437535 locus=PGSC0003DMG400025797 ID=PGSC0003DMT400066343.v4.03 annot-version=v4.03
Sequence

ATGCATTGGTTAAATAAGAGATTTAGACCGACTTCGAATTTGAATTCGAATTCCCTCCAA
AATAACAATCAATTTCAGCAGCAGCAACCAAGGCTTACTGGAGATGAAGAGTACTCTGTT
ATGGTTGCAACTCTGAAAAATGTCATCAATGGTAATATTCCAGTGCAAAACAATCAAGAA
TTCAATGTCTTTTCGCCATACAATTATTCTACTGCCACCACTACAACCACCACCACGACT
GTTACTTCCTCATCTTCGCCTTCTACTAGTATGTCCACGAGTTTCGAACAAGTATTGGGT
GTCCCTGCAGAACAAGAACCTTGTCAATTTTGCAGAATTCAAGGTTGTTTAGGCTGCGAC
ATTTTTGGTACCACATTTTCTTCTTCTTCTTCTTCTGCGCCCGCTGCTGTGGCTGCTCCT
ATTGCTGATAATAAGAAGAAGGGTAGTAGTACTACTACAGTCGCGATCGCAAAGAAAAAG
AAGAAGAATTACAGAGGAGTGAGACAGAGGCCATGGGGGAAATGGGCAGCAGAAATTCGT
GATCCTCGAAAAGCTGCACGTGTTTGGCTGGGAACTTTCACTACGGCAGAAGAAGCAGCT
AGAGCTTATGACAAAGCCGCCATTGAATTCAGGGGTCCACGAGCTAAATTGAATTTTTCA
TTTGCAGATTATACTGTTGACACTCAAGAACAACAGAGCACTTTATCTTCTTCACCACAA
CAATTACCAGAAGAGCCTCAGCAATCGCAGACAGCGAATAATAATTCGGATTTTGGAAAT
GAAATTTGGGATCAGTTGATGGGTGACAATGAAATTCAAGATTGGTTGACCATGATGAAT
TTCAATGGCGACTCTTCTGATTCTGGCGGGAATGTTCACAGCTTTTAA