Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400066248
CDS Infomation

pacid=37437106 polypeptide=PGSC0003DMP400044656 locus=PGSC0003DMG400025778 ID=PGSC0003DMT400066248.v4.03 annot-version=v4.03
Sequence

ATGGACCAGAAGTCATGGTTATGGTCGAAGAAACGATCTTCAGAGAAGACAATTGTTTCA
ATCACCAAATCTGATCATTCTGCTAAAGGAAATGAAATGGAGGAACAGACAGTTCCAAAT
GAAACCGAATATCTGGAGCAATCATTAAAAATCTTAGATGAGAAGTTAGCAACCGCGCTC
AGTGAGTCTAATTCTAAAGATGAACAATTGATAAAGGCTGCAGAAATGGAACAAGAAGCT
ATTGCAGGTCAGAAGAAAGCCGAAGCTGAAGTACTTTGCCTTAAAAAGGAACTCAATGAA
GCGGTACACCAGAGAGAAGCTGCTAATGAAAGGATAATGCACTTGAACACTGCCCTGAAA
GATCACATGCAGCAATTAGCTTCTCTCAGGGAAGATGACGAGCAAAAAATACGTGATGCT
GAAATGAGGACATCAAAAGAATTTGAGAAGGCGCTCAAAAAGTTAGAGGAAAAATTAGCA
GAAACAAATAAAAGGCATGCTAATTTGACTCTTGAGAATTGTCATCTGAATAAGGTCCTT
CTTGTGAAAGGGCAGATAATTGAAGAACTAACCAAGAGCGGTGTACAGGCGGAAGCAGAG
TTTAATGCACTAATGTCGAGGTTAGATTCTGTTGAGAAAGAAAATTCTTTCTTGAGGTAT
GAATTTCAGATGCTTGAGAGGGAGTTCCATATTCGGAATGAAGAGGTGGAATTCAGCCAC
CGCTCTTTGGATGCCTCACATAAGCAGCATCTTGAGAATGTGAAGAAAATTAGAAAATTG
GAAGCAGATTGTCAAAGATTGCGTCTTCTAACTCGCAAGCGGCTTCCAGGTCAAGTTGCA
TTGTCAAAGGTTAAGAATGAAATTGAAATGCAAGAAAAAAATCAGACTGTCATTAGGAGG
AGGAAGTCTGATCCTCCAACTGGAAGTTTAATTCCTAAGGACAGAGCCCCAGAAGGCCAT
CATGACATTCTCCGTAAAGAGATAAATTGTTTGGTCGAAAGTATGTGCAATCTGGAGGGA
GAGAACAGAGTTTTGAAAGAATTGTTAGCTAGGAAAGAAGTTGAGATCCGCCAGGGTGGG
CATCATCTTGGATTAGTTTCTTCTCTTAAGGGTTCCAAAGAGCTGGCCCTGGCTAGTCCA
CTATCATATGAAACTTCCTCAATATCAAGTTATGACACGAGCAAGAATGGGGTTTCTGAG
ATGTGTCTGATGGATGATTTTGTTGAAATGGAGAAACTTGCAATAGTTGCTGTTGATTCT
ACAATAGGGAGTTCTTATCCTCCCTCAGATGCAAGTTTCACTTTATCAGACTCCTCGAGA
ATAGAAACACATGGAAATCAGACGGACTCGAATGGTAAGGAACTAGTTCCAGTGGGACCA
GGTGATTCAAATGAAGCAATGGCGAAGAGATCCTCCAATTGGCTTCATGATATCTTGAAA
ATAATCATGGAGCAAAGCCGTGTCTCAAAAAAAGGCGCCGATGAGCTGATAGAGGACATT
AGAGTAGCTTCATACAATGTAATCCCTCCACATACTTGGGCAGGTCATTCTGAACTGCTT
CCCATCAGTGGTTACATTACTTGGAAATCTCCAGTGACATCTCCTAAGATGAAACGTTCA
ACAACCGAACCGGAGAAGACGCGTCCTATCCTCCAAGAAGAAAATGAAGGACTGAAAGCT
GAGATGAACAGTATTAAGTCCTCAAACAATGATGTACAAGTCAAGCTACAGGTAGCGAGG
AACAAGTGCGAAAACTTGGCAAGTGAACTTCAGCAATCACAACAAATTATTGAAGGCCTA
CAAGCTGAACTGGAAACAGCCAAAGAATCCAAAAGAATGATGGAGGATCTTATCGAAAAT
CAGAAATCAATCAATGATGATCTTGACACCCAGCTTAGTGTGACTAGAGTTAAACTAAAT
GAAACGCTTTCAAAGCTATCTTCTCTTCAAATAGAATTGGAAGATAGAAGTCACTGTTGC
GAAGAGCTGGAAGGAACTTGTCTTGAGCTTCAACTCCAACTTGAAAGTTTAACTGGCAAT
GTGGATGGTGTGGATCAAGAAAAAGGGCTCCAGCAAACTGTGAGTTCCTCTTCTGCCAAT
TTGAGTTTTTCTTTTGTGTCACTCTTGTCTAGTTACAACATCCATTCCGCCCTCCCCATC
CCTGATAGGCAGCGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400044656
PEP Infomation

pacid=37437106 transcript=PGSC0003DMT400066248 locus=PGSC0003DMG400025778 ID=PGSC0003DMT400066248.v4.03 annot-version=v4.03
Sequence

MDQKSWLWSKKRSSEKTIVSITKSDHSAKGNEMEEQTVPNETEYLEQSLKILDEKLATAL
SESNSKDEQLIKAAEMEQEAIAGQKKAEAEVLCLKKELNEAVHQREAANERIMHLNTALK
DHMQQLASLREDDEQKIRDAEMRTSKEFEKALKKLEEKLAETNKRHANLTLENCHLNKVL
LVKGQIIEELTKSGVQAEAEFNALMSRLDSVEKENSFLRYEFQMLEREFHIRNEEVEFSH
RSLDASHKQHLENVKKIRKLEADCQRLRLLTRKRLPGQVALSKVKNEIEMQEKNQTVIRR
RKSDPPTGSLIPKDRAPEGHHDILRKEINCLVESMCNLEGENRVLKELLARKEVEIRQGG
HHLGLVSSLKGSKELALASPLSYETSSISSYDTSKNGVSEMCLMDDFVEMEKLAIVAVDS
TIGSSYPPSDASFTLSDSSRIETHGNQTDSNGKELVPVGPGDSNEAMAKRSSNWLHDILK
IIMEQSRVSKKGADELIEDIRVASYNVIPPHTWAGHSELLPISGYITWKSPVTSPKMKRS
TTEPEKTRPILQEENEGLKAEMNSIKSSNNDVQVKLQVARNKCENLASELQQSQQIIEGL
QAELETAKESKRMMEDLIENQKSINDDLDTQLSVTRVKLNETLSKLSSLQIELEDRSHCC
EELEGTCLELQLQLESLTGNVDGVDQEKGLQQTVSSSSANLSFSFVSLLSSYNIHSALPI
PDRQR*

Transcript Sequence

Transcript ID

PGSC0003DMT400066248
Transcript Infomation

pacid=37437106 locus=PGSC0003DMG400025778 ID=PGSC0003DMT400066248.v4.03 annot-version=v4.03
Sequence

ATGGACCAGAAGTCATGGTTATGGTCGAAGAAACGATCTTCAGAGAAGACAATTGTTTCA
ATCACCAAATCTGATCATTCTGCTAAAGGAAATGAAATGGAGGAACAGACAGTTCCAAAT
GAAACCGAATATCTGGAGCAATCATTAAAAATCTTAGATGAGAAGTTAGCAACCGCGCTC
AGTGAGTCTAATTCTAAAGATGAACAATTGATAAAGGCTGCAGAAATGGAACAAGAAGCT
ATTGCAGGTCAGAAGAAAGCCGAAGCTGAAGTACTTTGCCTTAAAAAGGAACTCAATGAA
GCGGTACACCAGAGAGAAGCTGCTAATGAAAGGATAATGCACTTGAACACTGCCCTGAAA
GATCACATGCAGCAATTAGCTTCTCTCAGGGAAGATGACGAGCAAAAAATACGTGATGCT
GAAATGAGGACATCAAAAGAATTTGAGAAGGCGCTCAAAAAGTTAGAGGAAAAATTAGCA
GAAACAAATAAAAGGCATGCTAATTTGACTCTTGAGAATTGTCATCTGAATAAGGTCCTT
CTTGTGAAAGGGCAGATAATTGAAGAACTAACCAAGAGCGGTGTACAGGCGGAAGCAGAG
TTTAATGCACTAATGTCGAGGTTAGATTCTGTTGAGAAAGAAAATTCTTTCTTGAGGTAT
GAATTTCAGATGCTTGAGAGGGAGTTCCATATTCGGAATGAAGAGGTGGAATTCAGCCAC
CGCTCTTTGGATGCCTCACATAAGCAGCATCTTGAGAATGTGAAGAAAATTAGAAAATTG
GAAGCAGATTGTCAAAGATTGCGTCTTCTAACTCGCAAGCGGCTTCCAGGTCAAGTTGCA
TTGTCAAAGGTTAAGAATGAAATTGAAATGCAAGAAAAAAATCAGACTGTCATTAGGAGG
AGGAAGTCTGATCCTCCAACTGGAAGTTTAATTCCTAAGGACAGAGCCCCAGAAGGCCAT
CATGACATTCTCCGTAAAGAGATAAATTGTTTGGTCGAAAGTATGTGCAATCTGGAGGGA
GAGAACAGAGTTTTGAAAGAATTGTTAGCTAGGAAAGAAGTTGAGATCCGCCAGGGTGGG
CATCATCTTGGATTAGTTTCTTCTCTTAAGGGTTCCAAAGAGCTGGCCCTGGCTAGTCCA
CTATCATATGAAACTTCCTCAATATCAAGTTATGACACGAGCAAGAATGGGGTTTCTGAG
ATGTGTCTGATGGATGATTTTGTTGAAATGGAGAAACTTGCAATAGTTGCTGTTGATTCT
ACAATAGGGAGTTCTTATCCTCCCTCAGATGCAAGTTTCACTTTATCAGACTCCTCGAGA
ATAGAAACACATGGAAATCAGACGGACTCGAATGGTAAGGAACTAGTTCCAGTGGGACCA
GGTGATTCAAATGAAGCAATGGCGAAGAGATCCTCCAATTGGCTTCATGATATCTTGAAA
ATAATCATGGAGCAAAGCCGTGTCTCAAAAAAAGGCGCCGATGAGCTGATAGAGGACATT
AGAGTAGCTTCATACAATGTAATCCCTCCACATACTTGGGCAGGTCATTCTGAACTGCTT
CCCATCAGTGGTTACATTACTTGGAAATCTCCAGTGACATCTCCTAAGATGAAACGTTCA
ACAACCGAACCGGAGAAGACGCGTCCTATCCTCCAAGAAGAAAATGAAGGACTGAAAGCT
GAGATGAACAGTATTAAGTCCTCAAACAATGATGTACAAGTCAAGCTACAGGTAGCGAGG
AACAAGTGCGAAAACTTGGCAAGTGAACTTCAGCAATCACAACAAATTATTGAAGGCCTA
CAAGCTGAACTGGAAACAGCCAAAGAATCCAAAAGAATGATGGAGGATCTTATCGAAAAT
CAGAAATCAATCAATGATGATCTTGACACCCAGCTTAGTGTGACTAGAGTTAAACTAAAT
GAAACGCTTTCAAAGCTATCTTCTCTTCAAATAGAATTGGAAGATAGAAGTCACTGTTGC
GAAGAGCTGGAAGGAACTTGTCTTGAGCTTCAACTCCAACTTGAAAGTTTAACTGGCAAT
GTGGATGGTGTGGATCAAGAAAAAGGGCTCCAGCAAACTGTGAGTTCCTCTTCTGCCAAT
TTGAGTTTTTCTTTTGTGTCACTCTTGTCTAGTTACAACATCCATTCCGCCCTCCCCATC
CCTGATAGGCAGCGATGA