Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400066168
CDS Infomation

pacid=37438842 polypeptide=PGSC0003DMP400044600 locus=PGSC0003DMG400025753 ID=PGSC0003DMT400066168.v4.03 annot-version=v4.03
Sequence

ATGGTGACCAACCACCATTATACTCGAGTCGATACGTTGGAGCTGAGGGATCTAATCTAT
AGGAAGATTGGGCAACAGAGAGCTGAAAAGTACTTTGATGAGCTTAGTAGATTTTTCAGT
TCAAAGTTGAGCAAGGTTGACTTCGATAAGTCGTGCATTCGAACTATTGGGAGAGAGAAT
ATTCACCTACATAATCGTCTCCTTCTATCCATAGTGAAAAATGCCTCTTTGGGTAAGGTT
CCACCACCAAGGCCTAAAAAAGCTGAAGAATCTCTCAGCATTAAAGTTGGGAACGGTTAC
CAAAGAAGTTGTCTACAATCGCTCTATGGTGATGCATTTCCCTCATCACCTCGCAAAACC
AGGTCTCCAGTTAGTAGGGACAGAAGGTTGCGGGACCGTCCAAGTCCTCTTGGACCACTT
GGGAAAAGTCCTGTTACGTGTGAAGAAGCAGCACCTAGGGTACAAGAACAGCAAAGTGCC
ACAGAATTGCATTCCCTTGGTAGCAGACCTCCAGTTGAAGTTGCATCTGTAGAAGATGGG
GAAGAAGTCGAACAATTTGTTGGAAGTCCAGGAATTCAAAGCAGAAGCCTTGTCACTGCC
CCTCTTGGAATTTCTGTGAATGTAGGTGGTGCTCGAAAAACTCTCCATAGTGGATCTGTG
TACAACTTTCGTCTGGAGACTTGTCAAAGCAGTAGAGAATTGCCTGAGAGTAGATCGCTA
AGAAGCCGTTTGGAGCAGAAGTTAGAGTCGGAGGGGCTTGGCATATCATTGGACTGTGCT
AACCTGCTAAATAATAGCTTAGATGCATTTTTGAAAAGGCTGATTGAACCTTGCATAGGA
CTGGCTGGATCTCGACATACAAATGAACGTGTCAGATATCGTAATGGTCAAATACTCCCT
GGATGGTATGGACAATTTCCTGGAAATTATACAAAAAGACAAACAAGATCCTCATATGGT
AGGATGTTGGATTTCCGAGTGGCAGTGGAGACTAATCCTCATATACTTGGGGGAGATTGG
TCCACTCTACTTGAGAAGGTCTGTGCTTCTGCTTCTGAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400044600
PEP Infomation

pacid=37438842 transcript=PGSC0003DMT400066168 locus=PGSC0003DMG400025753 ID=PGSC0003DMT400066168.v4.03 annot-version=v4.03
Sequence

MVTNHHYTRVDTLELRDLIYRKIGQQRAEKYFDELSRFFSSKLSKVDFDKSCIRTIGREN
IHLHNRLLLSIVKNASLGKVPPPRPKKAEESLSIKVGNGYQRSCLQSLYGDAFPSSPRKT
RSPVSRDRRLRDRPSPLGPLGKSPVTCEEAAPRVQEQQSATELHSLGSRPPVEVASVEDG
EEVEQFVGSPGIQSRSLVTAPLGISVNVGGARKTLHSGSVYNFRLETCQSSRELPESRSL
RSRLEQKLESEGLGISLDCANLLNNSLDAFLKRLIEPCIGLAGSRHTNERVRYRNGQILP
GWYGQFPGNYTKRQTRSSYGRMLDFRVAVETNPHILGGDWSTLLEKVCASASE*

Transcript Sequence

Transcript ID

PGSC0003DMT400066168
Transcript Infomation

pacid=37438842 locus=PGSC0003DMG400025753 ID=PGSC0003DMT400066168.v4.03 annot-version=v4.03
Sequence

ATGGTGACCAACCACCATTATACTCGAGTCGATACGTTGGAGCTGAGGGATCTAATCTAT
AGGAAGATTGGGCAACAGAGAGCTGAAAAGTACTTTGATGAGCTTAGTAGATTTTTCAGT
TCAAAGTTGAGCAAGGTTGACTTCGATAAGTCGTGCATTCGAACTATTGGGAGAGAGAAT
ATTCACCTACATAATCGTCTCCTTCTATCCATAGTGAAAAATGCCTCTTTGGGTAAGGTT
CCACCACCAAGGCCTAAAAAAGCTGAAGAATCTCTCAGCATTAAAGTTGGGAACGGTTAC
CAAAGAAGTTGTCTACAATCGCTCTATGGTGATGCATTTCCCTCATCACCTCGCAAAACC
AGGTCTCCAGTTAGTAGGGACAGAAGGTTGCGGGACCGTCCAAGTCCTCTTGGACCACTT
GGGAAAAGTCCTGTTACGTGTGAAGAAGCAGCACCTAGGGTACAAGAACAGCAAAGTGCC
ACAGAATTGCATTCCCTTGGTAGCAGACCTCCAGTTGAAGTTGCATCTGTAGAAGATGGG
GAAGAAGTCGAACAATTTGTTGGAAGTCCAGGAATTCAAAGCAGAAGCCTTGTCACTGCC
CCTCTTGGAATTTCTGTGAATGTAGGTGGTGCTCGAAAAACTCTCCATAGTGGATCTGTG
TACAACTTTCGTCTGGAGACTTGTCAAAGCAGTAGAGAATTGCCTGAGAGTAGATCGCTA
AGAAGCCGTTTGGAGCAGAAGTTAGAGTCGGAGGGGCTTGGCATATCATTGGACTGTGCT
AACCTGCTAAATAATAGCTTAGATGCATTTTTGAAAAGGCTGATTGAACCTTGCATAGGA
CTGGCTGGATCTCGACATACAAATGAACGTGTCAGATATCGTAATGGTCAAATACTCCCT
GGATGGTATGGACAATTTCCTGGAAATTATACAAAAAGACAAACAAGATCCTCATATGGT
AGGATGTTGGATTTCCGAGTGGCAGTGGAGACTAATCCTCATATACTTGGGGGAGATTGG
TCCACTCTACTTGAGAAGGTCTGTGCTTCTGCTTCTGAATAA