Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400066163
CDS Infomation

pacid=37439802 polypeptide=PGSC0003DMP400044595 locus=PGSC0003DMG400025751 ID=PGSC0003DMT400066163.v4.03 annot-version=v4.03
Sequence

ATGAAGTTCATGAAACTTGGATCCAAGCCTGATGCCTTTCAGACAGATGGGAACAATGTC
AGATATGTTGCTTCAGAGTTGGCCTCGGACATCGCTATTAATGTAGGAGATGTGAAGTTT
TATCTGCATAAGTTTCCTCTCCTGTCCAAGAGTGCCACTTTGCAAAAGTTGGTTTCTAAT
GCAAGTGAAGGCAATTGTAACGAAGTTGACATTCATGACATCCCTGGAGGACCTAGTGCT
TTCGAAATATGTGCCAAATTCTGTTACGGCATGACTGTTACACTGAATGCTTATAATGTC
ATTTCTGCAAGGTGTGCTGCTGAGTATCTCGGTATGAATGAAAGTCTCGAGAAAGGAAAC
CTGGTCTACAAGATTGATGTTTTCCTGAACTCTAGCATTTTCCGGAGTTGGAAAGATTCA
ATAATAGTTCTTCAGACTACTAAGTCTCAATCACGCATGTGCGAGGAACTGAAGTTGACC
AGCCACTGCATTGATGCTGTAGCATCCAGGGCTTCGGTTGATGTTTCCAGGGTGGATTGG
TCCTATACTTATAATCGTAAAAAGCTTCCAGAAGAGAATGGAAATGATCCTAACTTGAAT
GGAATTAGAAGCCGCATGGTGCTGAAAGATTGGTGGGTTGAGGATTTATGTGAGCTTGAA
GTAGATCTGTATAAGCGGGTGGTTATCACTATAAAAAACAAAGGGATTGTTTCTTCTGAA
GTTATTGGAGAAGCTGCCAAAGCTTATGCATATAGAAGGTTTCCAGGCTTTAATAAAGGC
GCCTTCCAATTCAATGATGTCTCCAAATGTCGCCCAATATTGGATACGGTGGTATGGCTA
TTGCCCTCTGAGAAAGGTAGCGTCTCTTGTAGTTTCTTGTTAAAATTGCTAAAAGCATCA
GTTTCACTAGACTCTGGAGAAACTTTGAAGGCAGAACTAGTCAAAAGAATAGGACAGCAA
TTGGAGGAAGCTTCTGTGAATGATCTTTTGATTCGAGCAGCAGATGGGGAAGGAACCATG
TATGATGCCCATGTCGTCCAGAAAATACTAGAAGCGTTTGTCATGAGAGATATGGATTCT
GAACCTCAGCTGGAAGATGGAGATGAAATTCAGGAGGTCCGAAAGCCAGGGATTTTATCA
GAAGCTTCAAAACTGATGGTGGCAAAGCTAGTAGATGGATATCTTACTGAAATTGCAAAA
GATCCTAATCTCCCTTTGTCAACATTTGTTGGTCTGGCAGAGATGGTATCCAATTTCCCT
CGACCCGGTCATGATGGAATTTATCGCGCAGTTGATATGTACCTTAAGGTGAGTTTCCCT
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400044595
PEP Infomation

pacid=37439802 transcript=PGSC0003DMT400066163 locus=PGSC0003DMG400025751 ID=PGSC0003DMT400066163.v4.03 annot-version=v4.03
Sequence

MKFMKLGSKPDAFQTDGNNVRYVASELASDIAINVGDVKFYLHKFPLLSKSATLQKLVSN
ASEGNCNEVDIHDIPGGPSAFEICAKFCYGMTVTLNAYNVISARCAAEYLGMNESLEKGN
LVYKIDVFLNSSIFRSWKDSIIVLQTTKSQSRMCEELKLTSHCIDAVASRASVDVSRVDW
SYTYNRKKLPEENGNDPNLNGIRSRMVLKDWWVEDLCELEVDLYKRVVITIKNKGIVSSE
VIGEAAKAYAYRRFPGFNKGAFQFNDVSKCRPILDTVVWLLPSEKGSVSCSFLLKLLKAS
VSLDSGETLKAELVKRIGQQLEEASVNDLLIRAADGEGTMYDAHVVQKILEAFVMRDMDS
EPQLEDGDEIQEVRKPGILSEASKLMVAKLVDGYLTEIAKDPNLPLSTFVGLAEMVSNFP
RPGHDGIYRAVDMYLKVSFP*

Transcript Sequence

Transcript ID

PGSC0003DMT400066163
Transcript Infomation

pacid=37439802 locus=PGSC0003DMG400025751 ID=PGSC0003DMT400066163.v4.03 annot-version=v4.03
Sequence

ATGAAGTTCATGAAACTTGGATCCAAGCCTGATGCCTTTCAGACAGATGGGAACAATGTC
AGATATGTTGCTTCAGAGTTGGCCTCGGACATCGCTATTAATGTAGGAGATGTGAAGTTT
TATCTGCATAAGTTTCCTCTCCTGTCCAAGAGTGCCACTTTGCAAAAGTTGGTTTCTAAT
GCAAGTGAAGGCAATTGTAACGAAGTTGACATTCATGACATCCCTGGAGGACCTAGTGCT
TTCGAAATATGTGCCAAATTCTGTTACGGCATGACTGTTACACTGAATGCTTATAATGTC
ATTTCTGCAAGGTGTGCTGCTGAGTATCTCGGTATGAATGAAAGTCTCGAGAAAGGAAAC
CTGGTCTACAAGATTGATGTTTTCCTGAACTCTAGCATTTTCCGGAGTTGGAAAGATTCA
ATAATAGTTCTTCAGACTACTAAGTCTCAATCACGCATGTGCGAGGAACTGAAGTTGACC
AGCCACTGCATTGATGCTGTAGCATCCAGGGCTTCGGTTGATGTTTCCAGGGTGGATTGG
TCCTATACTTATAATCGTAAAAAGCTTCCAGAAGAGAATGGAAATGATCCTAACTTGAAT
GGAATTAGAAGCCGCATGGTGCTGAAAGATTGGTGGGTTGAGGATTTATGTGAGCTTGAA
GTAGATCTGTATAAGCGGGTGGTTATCACTATAAAAAACAAAGGGATTGTTTCTTCTGAA
GTTATTGGAGAAGCTGCCAAAGCTTATGCATATAGAAGGTTTCCAGGCTTTAATAAAGGC
GCCTTCCAATTCAATGATGTCTCCAAATGTCGCCCAATATTGGATACGGTGGTATGGCTA
TTGCCCTCTGAGAAAGGTAGCGTCTCTTGTAGTTTCTTGTTAAAATTGCTAAAAGCATCA
GTTTCACTAGACTCTGGAGAAACTTTGAAGGCAGAACTAGTCAAAAGAATAGGACAGCAA
TTGGAGGAAGCTTCTGTGAATGATCTTTTGATTCGAGCAGCAGATGGGGAAGGAACCATG
TATGATGCCCATGTCGTCCAGAAAATACTAGAAGCGTTTGTCATGAGAGATATGGATTCT
GAACCTCAGCTGGAAGATGGAGATGAAATTCAGGAGGTCCGAAAGCCAGGGATTTTATCA
GAAGCTTCAAAACTGATGGTGGCAAAGCTAGTAGATGGATATCTTACTGAAATTGCAAAA
GATCCTAATCTCCCTTTGTCAACATTTGTTGGTCTGGCAGAGATGGTATCCAATTTCCCT
CGACCCGGTCATGATGGAATTTATCGCGCAGTTGATATGTACCTTAAGGTGAGTTTCCCT
TGA