Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400066158
CDS Infomation

pacid=37439317 polypeptide=PGSC0003DMP400044591 locus=PGSC0003DMG400025748 ID=PGSC0003DMT400066158.v4.03 annot-version=v4.03
Sequence

ATGGCTAGTTTGAAATCAGGGGTTCTTGTAAAGTTACTTGAAGAAATGAAAATGGTTGAA
AATATGATAGTCGAAGATCGAAGACCAACGTTGTTACAAATCAGAAGCATAATTCCTGTT
CTTGAAGAAGGTAATCTCTTGCCTAACAGAGGATTTTACCTCAAGATTTCAGATGTATCA
CACGCAATTTATGTCACATTGCCCCAAGACCAAAATGAGTTGATTTTAGGTAACAAATTA
AAACTAGGACAATTCATTTATGTACAAAAATTAGAGGATGCAGAACCATTTCCATTGCTT
AAAGATTTTACGCCTCTCCCTGGTAGACGTCCGTGTGATGGAACCCCTGAAGAAATTGGT
AAGGTTCCAAAATTGGAAAAGATTCTTGATGGGTCGAACTCTGATTTTATTGTCGAAAAG
GGTGTCATTTCTGAAGAAAATATTATGGATATATCGTCTTGTTTAAGAAGGTTGTCTTTA
GAGTCATCTGATGTAGATGAAGTGAGGAAAAAAAGTAGTAATACTAATGTTCTTGAGGGA
AGTAGTAATACTAAAGGGAAGTTTAGGTCCTTGAGTGCTTCGAAAACTCGTCCAGGAGTT
AAAAGATCATGTGATGTTGAGAGCAGAAATTATGATAGTATGAGGCTAGTTGGTAGGAAT
AGGAGAATGTCTATTGATAATGATAGCGATACAGATAGCACAATATCTTCAGTTTCATCA
TCTACATGGACTTCTAAGAGGAAAAGTTGGAATGAGTTGAAGAGTTTGGGAGCTGAGGAG
ATTTTTGATTCTTCAGTTGTCAAACACAATATCAGACCGCCACGTTGTCGTAGTGCAACT
GTTTCACCTGTTCGTTCTACCAAATACGACAGCTCAGATGACAATTCAAGTTCAATATCA
AGAAGAAAGGTTGTTGATGTTGCGAAGAAAATAGTCAAGAGTTCAGCTAAGAGCAAGAAT
TCTGTGTCAAAGATCAACTGTGAACAAACCATCCGTCCAATTAAAGGATTAGTATTTGAC
AGACAAGGGGCAGAAACTGGGATTTCATGGGATTCACTCCCCTCGAGTTTGGTGGAGATT
GGCAAGGAGGTTGTAAAGAAAAGAGACATTGCTTTGTTTGCAGCTGCTGAGGCTTTGCAA
GAAGCTTGTGCAGCTGAGAGGTTGCTCAATTCCTTAAGCAAATTCTCAGAGTTTCATATA
CCTGAAGAAGATGATCTACAACCTCGTATTGATACGTTTTTGGATCTTCAAGATGATATG
GCTCAAACAAGACTAATAATGAAGTGTCTAACAAATATAAGTCCAACTAGAACAGAAGAA
ACTGATTCAAGCAGCACCAGTGCAGATAATGAAGCATCAACAATCACAGTGCAAAGAAAG
AAAAATGCAACTACATGGATAAAATCAGCAGTGGCATTAGATCTTTCACCATCCTCCACT
GCTCTCAATCCAATTCCTAAGACTAGGAGCATTACCAATACATTGAAGAAGTCAAGTACA
TCGAGTGAAAGTACCAAACAAAAAGGTGCAAGTATCGTTAAAACTGATCATAATAAGAAC
ACTGATGACACTTCTCCTGTATTGACATCTAACAATGATGCGCAACCTGAATGGACCAGG
GGTAGCACTATCGATGCAGCTACTCACCTAGCTTCTTCGTTGCAGGACGAGTGTAGGAAA
ATGTTTTTGGGATTCATAGAGAAATATATCAATGAACTCGAAAGGAAAATGTCTTTGATG
GTATCAGATAATCAAGTAGCAGCATTGATGTATAAAATCAAGAGAGTAAATGACTGGTTA
GATTTGATCATCAACAAAGAAGGTTCAAATTTGGATGAGTCAGAAATTGAAGCATGTCAT
AGAGTGAGGAACAAAATATATGGGATCCTACTGAAGCATGTAGAGAGGACTGCAATGGCT
TTTGAAAGTAGCAAAGTGCTTCGTTACATCGTCGACAACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400044591
PEP Infomation

pacid=37439317 transcript=PGSC0003DMT400066158 locus=PGSC0003DMG400025748 ID=PGSC0003DMT400066158.v4.03 annot-version=v4.03
Sequence

MASLKSGVLVKLLEEMKMVENMIVEDRRPTLLQIRSIIPVLEEGNLLPNRGFYLKISDVS
HAIYVTLPQDQNELILGNKLKLGQFIYVQKLEDAEPFPLLKDFTPLPGRRPCDGTPEEIG
KVPKLEKILDGSNSDFIVEKGVISEENIMDISSCLRRLSLESSDVDEVRKKSSNTNVLEG
SSNTKGKFRSLSASKTRPGVKRSCDVESRNYDSMRLVGRNRRMSIDNDSDTDSTISSVSS
STWTSKRKSWNELKSLGAEEIFDSSVVKHNIRPPRCRSATVSPVRSTKYDSSDDNSSSIS
RRKVVDVAKKIVKSSAKSKNSVSKINCEQTIRPIKGLVFDRQGAETGISWDSLPSSLVEI
GKEVVKKRDIALFAAAEALQEACAAERLLNSLSKFSEFHIPEEDDLQPRIDTFLDLQDDM
AQTRLIMKCLTNISPTRTEETDSSSTSADNEASTITVQRKKNATTWIKSAVALDLSPSST
ALNPIPKTRSITNTLKKSSTSSESTKQKGASIVKTDHNKNTDDTSPVLTSNNDAQPEWTR
GSTIDAATHLASSLQDECRKMFLGFIEKYINELERKMSLMVSDNQVAALMYKIKRVNDWL
DLIINKEGSNLDESEIEACHRVRNKIYGILLKHVERTAMAFESSKVLRYIVDN*

Transcript Sequence

Transcript ID

PGSC0003DMT400066158
Transcript Infomation

pacid=37439317 locus=PGSC0003DMG400025748 ID=PGSC0003DMT400066158.v4.03 annot-version=v4.03
Sequence

ATGGCTAGTTTGAAATCAGGGGTTCTTGTAAAGTTACTTGAAGAAATGAAAATGGTTGAA
AATATGATAGTCGAAGATCGAAGACCAACGTTGTTACAAATCAGAAGCATAATTCCTGTT
CTTGAAGAAGGTAATCTCTTGCCTAACAGAGGATTTTACCTCAAGATTTCAGATGTATCA
CACGCAATTTATGTCACATTGCCCCAAGACCAAAATGAGTTGATTTTAGGTAACAAATTA
AAACTAGGACAATTCATTTATGTACAAAAATTAGAGGATGCAGAACCATTTCCATTGCTT
AAAGATTTTACGCCTCTCCCTGGTAGACGTCCGTGTGATGGAACCCCTGAAGAAATTGGT
AAGGTTCCAAAATTGGAAAAGATTCTTGATGGGTCGAACTCTGATTTTATTGTCGAAAAG
GGTGTCATTTCTGAAGAAAATATTATGGATATATCGTCTTGTTTAAGAAGGTTGTCTTTA
GAGTCATCTGATGTAGATGAAGTGAGGAAAAAAAGTAGTAATACTAATGTTCTTGAGGGA
AGTAGTAATACTAAAGGGAAGTTTAGGTCCTTGAGTGCTTCGAAAACTCGTCCAGGAGTT
AAAAGATCATGTGATGTTGAGAGCAGAAATTATGATAGTATGAGGCTAGTTGGTAGGAAT
AGGAGAATGTCTATTGATAATGATAGCGATACAGATAGCACAATATCTTCAGTTTCATCA
TCTACATGGACTTCTAAGAGGAAAAGTTGGAATGAGTTGAAGAGTTTGGGAGCTGAGGAG
ATTTTTGATTCTTCAGTTGTCAAACACAATATCAGACCGCCACGTTGTCGTAGTGCAACT
GTTTCACCTGTTCGTTCTACCAAATACGACAGCTCAGATGACAATTCAAGTTCAATATCA
AGAAGAAAGGTTGTTGATGTTGCGAAGAAAATAGTCAAGAGTTCAGCTAAGAGCAAGAAT
TCTGTGTCAAAGATCAACTGTGAACAAACCATCCGTCCAATTAAAGGATTAGTATTTGAC
AGACAAGGGGCAGAAACTGGGATTTCATGGGATTCACTCCCCTCGAGTTTGGTGGAGATT
GGCAAGGAGGTTGTAAAGAAAAGAGACATTGCTTTGTTTGCAGCTGCTGAGGCTTTGCAA
GAAGCTTGTGCAGCTGAGAGGTTGCTCAATTCCTTAAGCAAATTCTCAGAGTTTCATATA
CCTGAAGAAGATGATCTACAACCTCGTATTGATACGTTTTTGGATCTTCAAGATGATATG
GCTCAAACAAGACTAATAATGAAGTGTCTAACAAATATAAGTCCAACTAGAACAGAAGAA
ACTGATTCAAGCAGCACCAGTGCAGATAATGAAGCATCAACAATCACAGTGCAAAGAAAG
AAAAATGCAACTACATGGATAAAATCAGCAGTGGCATTAGATCTTTCACCATCCTCCACT
GCTCTCAATCCAATTCCTAAGACTAGGAGCATTACCAATACATTGAAGAAGTCAAGTACA
TCGAGTGAAAGTACCAAACAAAAAGGTGCAAGTATCGTTAAAACTGATCATAATAAGAAC
ACTGATGACACTTCTCCTGTATTGACATCTAACAATGATGCGCAACCTGAATGGACCAGG
GGTAGCACTATCGATGCAGCTACTCACCTAGCTTCTTCGTTGCAGGACGAGTGTAGGAAA
ATGTTTTTGGGATTCATAGAGAAATATATCAATGAACTCGAAAGGAAAATGTCTTTGATG
GTATCAGATAATCAAGTAGCAGCATTGATGTATAAAATCAAGAGAGTAAATGACTGGTTA
GATTTGATCATCAACAAAGAAGGTTCAAATTTGGATGAGTCAGAAATTGAAGCATGTCAT
AGAGTGAGGAACAAAATATATGGGATCCTACTGAAGCATGTAGAGAGGACTGCAATGGCT
TTTGAAAGTAGCAAAGTGCTTCGTTACATCGTCGACAACTAA