Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400066146
CDS Infomation

pacid=37436273 polypeptide=PGSC0003DMP400044580 locus=PGSC0003DMG400025743 ID=PGSC0003DMT400066146.v4.03 annot-version=v4.03
Sequence

ATGGCGAAGAGCGAAACTTCAGTAGGGAGCGAAGATCCTTCTTCTTCTCGCCCATGGGAA
TCTTATCACACAGTCTTTACCAATGCCAAAGCAGGAATGGAAGGGGTGGACAAGGAAAAA
GTACAGAGGATAGTGTATGAAATGAGTAAAGGGTCCAAGTATTTTGAGAATGAGGAAAAG
AAGGAAGCTTATACGAAGCAGAAAATTGAGAACATGCGTATTCAGTACTCCAAACTCACT
GCACAAGATATATCTCATCATCAGAAGATTGCTGACAAAAGGATTTTAGAGCTAGAAGCC
ACACGTGATTTGTCAAGGATCTGGCTACATGTGGATATGGATGCTTTTTATGCAGCTGTT
GAAACCTTGTGTAATCCTTCATTGAAAGGCAGGCCAATGGCTGTTGGCAGCATGTCCATG
CTTTCCACAGCGAACTATGAGGCCCGGAAATTTGGTGTTCGAGCTGCAATGCCTGGATTC
ATTGCACGTAAACTATGTCCGGAGTTGTTATTTGTCCCTGTAGACTTTCAGAAATATAAT
CATTACAGCAACTTAACAAGAAAAGTTTTTCAGAAATATGATCCGAACTTTTTGGCTGCC
AGCTTGGATGAGGCATACCTAGATATTACTAGTGTTTGCAAAGAGAGGGGCATTACGAGT
GGAGAAGTAGCTGAAGAGCTTAGAGAAAGTGTACACCTTGAGACAGGTCTAACGTGTAGT
GCGGGAGTTGCACCAAACCGCTTACTTGCTAAGGTTTGTTCAGATATCAACAAACCCAAT
GGCCAGTTTGTTTTGCCAAATGATCGAAGTGCTGTTGTGACATTTATTTCTTCACTTCCA
ATAAGGAAGATTGGGGGCATTGGTAAGGTCACTGAACGTATCTTAAAGGATGTCTTTGGA
ATAGCAACCTGTGAGGAGATGCTGCAAAAGAGTAGTTTCCTTTGTGGCCTGTTTTCTCAT
TCTTCAGCAGACTTTTTCCTTTCCGTAGGTCTAGGGCTTGGTGGAACCAATACTCCTCAA
TATAGGATGAGAAAGAGTATAAGTAATGAAAGAACATTTTCAGCCACTGAAGATGAAGCT
TTGCTTTTTCAAAAATTAGTTGATCTAGCAGAGATGCTTTCTGCTGATATGAAAAAGGAA
GGTCTTTTTGGGCGAACAGTGACACTAAAACTGAAAACCGCATCCTTTGAGGTTCGATCT
CGAGCGGTGACTTTGCCAAGTTACATAAGTTCAAGTGAGGAAATCTTGAAACATGCTTCA
AAGCTGCTTAAGGCCGAATTTCCTGTTTCTTTGAGGCTCATGGGACTTCGAATGTCTCAT
TTCAGTGAAGACAAGAATGGGATTCCACCTGATCCTACACAAAAAACTCTTTCTAATTTC
ATTCTTTCTGGAGATGCTTCTGGAGTAAAGACAAGCGATTACAGGCCCTTGGTCTCTGAT
GTTTGTGATAATACTTTCTCAGTTGATGAGAATTGTTGTCCTACCTACTGCGCTGAGACA
TCTTGTGATCTGCGTGACTCTTCAATGGAAAACACGGCATCAGATTCTACTTACAGTTGC
CATGTAATAGGGAACATTAATGAAGAATTGAATGAAACTGTTGTACCTCAAAGTAGTGAA
CCTCAACCTAAGGTTCATGAACCAACCGATACTGATCATACAATAAAGTCTGATAAGGTC
GATTCTTATATGGGACAATTGGAGGCAAGCAGCTGTGATAGATGGGAAATTGGTGTTAAC
TGCACGAATGATGAAGCAGGGTCTGTATCAGATCAGAAGCAATTATTTCTTTGGGTGGAC
GACTACAAATGCCCTATTTGTGGTATTGAAATGCCTCCAAGTTTCATTGAAGAAAGGCAA
GAACATTCTGATTTTCATCTTGCTGAAAAGCTGCAAGGTGAAGAATCAGGTAACCACCGC
AGAAGTTTTCTGCCACAACAGAGGGCTCCCCAGAGAGGCCATACTGGAAGCAGCAGTCGG
CAGAAAAAGAAACAGAAATCATCTCCAACTGCTAGCAAATATGTACCAATTGACGCATTC
TTTGTTAAAACAAACCAGAATTTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400044580
PEP Infomation

pacid=37436273 transcript=PGSC0003DMT400066146 locus=PGSC0003DMG400025743 ID=PGSC0003DMT400066146.v4.03 annot-version=v4.03
Sequence

MAKSETSVGSEDPSSSRPWESYHTVFTNAKAGMEGVDKEKVQRIVYEMSKGSKYFENEEK
KEAYTKQKIENMRIQYSKLTAQDISHHQKIADKRILELEATRDLSRIWLHVDMDAFYAAV
ETLCNPSLKGRPMAVGSMSMLSTANYEARKFGVRAAMPGFIARKLCPELLFVPVDFQKYN
HYSNLTRKVFQKYDPNFLAASLDEAYLDITSVCKERGITSGEVAEELRESVHLETGLTCS
AGVAPNRLLAKVCSDINKPNGQFVLPNDRSAVVTFISSLPIRKIGGIGKVTERILKDVFG
IATCEEMLQKSSFLCGLFSHSSADFFLSVGLGLGGTNTPQYRMRKSISNERTFSATEDEA
LLFQKLVDLAEMLSADMKKEGLFGRTVTLKLKTASFEVRSRAVTLPSYISSSEEILKHAS
KLLKAEFPVSLRLMGLRMSHFSEDKNGIPPDPTQKTLSNFILSGDASGVKTSDYRPLVSD
VCDNTFSVDENCCPTYCAETSCDLRDSSMENTASDSTYSCHVIGNINEELNETVVPQSSE
PQPKVHEPTDTDHTIKSDKVDSYMGQLEASSCDRWEIGVNCTNDEAGSVSDQKQLFLWVD
DYKCPICGIEMPPSFIEERQEHSDFHLAEKLQGEESGNHRRSFLPQQRAPQRGHTGSSSR
QKKKQKSSPTASKYVPIDAFFVKTNQNF*

Transcript Sequence

Transcript ID

PGSC0003DMT400066146
Transcript Infomation

pacid=37436273 locus=PGSC0003DMG400025743 ID=PGSC0003DMT400066146.v4.03 annot-version=v4.03
Sequence

ATGGCGAAGAGCGAAACTTCAGTAGGGAGCGAAGATCCTTCTTCTTCTCGCCCATGGGAA
TCTTATCACACAGTCTTTACCAATGCCAAAGCAGGAATGGAAGGGGTGGACAAGGAAAAA
GTACAGAGGATAGTGTATGAAATGAGTAAAGGGTCCAAGTATTTTGAGAATGAGGAAAAG
AAGGAAGCTTATACGAAGCAGAAAATTGAGAACATGCGTATTCAGTACTCCAAACTCACT
GCACAAGATATATCTCATCATCAGAAGATTGCTGACAAAAGGATTTTAGAGCTAGAAGCC
ACACGTGATTTGTCAAGGATCTGGCTACATGTGGATATGGATGCTTTTTATGCAGCTGTT
GAAACCTTGTGTAATCCTTCATTGAAAGGCAGGCCAATGGCTGTTGGCAGCATGTCCATG
CTTTCCACAGCGAACTATGAGGCCCGGAAATTTGGTGTTCGAGCTGCAATGCCTGGATTC
ATTGCACGTAAACTATGTCCGGAGTTGTTATTTGTCCCTGTAGACTTTCAGAAATATAAT
CATTACAGCAACTTAACAAGAAAAGTTTTTCAGAAATATGATCCGAACTTTTTGGCTGCC
AGCTTGGATGAGGCATACCTAGATATTACTAGTGTTTGCAAAGAGAGGGGCATTACGAGT
GGAGAAGTAGCTGAAGAGCTTAGAGAAAGTGTACACCTTGAGACAGGTCTAACGTGTAGT
GCGGGAGTTGCACCAAACCGCTTACTTGCTAAGGTTTGTTCAGATATCAACAAACCCAAT
GGCCAGTTTGTTTTGCCAAATGATCGAAGTGCTGTTGTGACATTTATTTCTTCACTTCCA
ATAAGGAAGATTGGGGGCATTGGTAAGGTCACTGAACGTATCTTAAAGGATGTCTTTGGA
ATAGCAACCTGTGAGGAGATGCTGCAAAAGAGTAGTTTCCTTTGTGGCCTGTTTTCTCAT
TCTTCAGCAGACTTTTTCCTTTCCGTAGGTCTAGGGCTTGGTGGAACCAATACTCCTCAA
TATAGGATGAGAAAGAGTATAAGTAATGAAAGAACATTTTCAGCCACTGAAGATGAAGCT
TTGCTTTTTCAAAAATTAGTTGATCTAGCAGAGATGCTTTCTGCTGATATGAAAAAGGAA
GGTCTTTTTGGGCGAACAGTGACACTAAAACTGAAAACCGCATCCTTTGAGGTTCGATCT
CGAGCGGTGACTTTGCCAAGTTACATAAGTTCAAGTGAGGAAATCTTGAAACATGCTTCA
AAGCTGCTTAAGGCCGAATTTCCTGTTTCTTTGAGGCTCATGGGACTTCGAATGTCTCAT
TTCAGTGAAGACAAGAATGGGATTCCACCTGATCCTACACAAAAAACTCTTTCTAATTTC
ATTCTTTCTGGAGATGCTTCTGGAGTAAAGACAAGCGATTACAGGCCCTTGGTCTCTGAT
GTTTGTGATAATACTTTCTCAGTTGATGAGAATTGTTGTCCTACCTACTGCGCTGAGACA
TCTTGTGATCTGCGTGACTCTTCAATGGAAAACACGGCATCAGATTCTACTTACAGTTGC
CATGTAATAGGGAACATTAATGAAGAATTGAATGAAACTGTTGTACCTCAAAGTAGTGAA
CCTCAACCTAAGGTTCATGAACCAACCGATACTGATCATACAATAAAGTCTGATAAGGTC
GATTCTTATATGGGACAATTGGAGGCAAGCAGCTGTGATAGATGGGAAATTGGTGTTAAC
TGCACGAATGATGAAGCAGGGTCTGTATCAGATCAGAAGCAATTATTTCTTTGGGTGGAC
GACTACAAATGCCCTATTTGTGGTATTGAAATGCCTCCAAGTTTCATTGAAGAAAGGCAA
GAACATTCTGATTTTCATCTTGCTGAAAAGCTGCAAGGTGAAGAATCAGGTAACCACCGC
AGAAGTTTTCTGCCACAACAGAGGGCTCCCCAGAGAGGCCATACTGGAAGCAGCAGTCGG
CAGAAAAAGAAACAGAAATCATCTCCAACTGCTAGCAAATATGTACCAATTGACGCATTC
TTTGTTAAAACAAACCAGAATTTTTGA