Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400066123
CDS Infomation

pacid=37439794 polypeptide=PGSC0003DMP400044563 locus=PGSC0003DMG400025737 ID=PGSC0003DMT400066123.v4.03 annot-version=v4.03
Sequence

ATGGCAACTCTTTCTGCTACTTCATCTTCTTCTTCTTCTTGGTCCCTCAAAAACAGGAGG
CCGCATTACCTACCTCCTATTTCTTCAATTTCCAAAAACCCAATTTGCCGAAATACCCTC
TTCTCGTTTTCCTCGTACAACCCAAAAAGATTGAATCTTTATGTTCCTTACAAAAAAAGA
TTGAATTTTTATGTTAAAGCTGCCGAAGAAGATGAACCCTCATCTTCTTCTTCTGTGGCT
GTAGCTTCAGAAGAAAATGATTCTCCAAAGAATGATGCTCATATTCAAGAGGGTGAGAGT
GGTGCTCAGCATGAGACTGAGTCTGAGAGGATAGAGAGGGAGAAACAGCAAGAAATGGAT
TGGAAAACAGATGAGGAATTCAAGAAGTTTATGGGGAATCCCTCAATTGAGGCTGCTATA
AAACTTGAGAAAAAGAGAGCTGATAGGAAGCTGAAAGAGCTTGATAGTGAAACCACTAGC
AACCCACTTGTGGGCTTCTTTAAAAATTTGGTTCGTGTTAGTTTGTCCAAAGAGAAAGAG
AGGTTGGAAAAAGCAGAAGAAGCTTTTGTAGCTCTTGATCTTAATAAGCTAAGGAATTGC
TTTGGCTTTGATACGTTCTTCACGACTGATGTGAGGAGATTTGGAGATGGGGGGATTTTC
ATTGGGAACTTGAGGAGGCCTATTGATGAAGTAATACCCAAATTGGAGAAGAAGTTATCA
GAGGCTGCTGGACGGGAGGTCGTCTTGTGGTTTATGGAGGAAAAGACAAATGATATTGTA
AAGCAGGCTTGTGTGGTACAACCCAAGTCAGAGATGGATCTTGAATTTGAATCAACCAAA
TTAAGTACTCCTTGGGGATACATCAGTGCTGTATCTTTGGCCGTAACAACTTTTGGCACT
ATAGCTTTGACCAGTGGTTTCTTCCTTAAGCCTGATGCTACGATTGATGATTACTTGGCC
AATGTTGTACCCCTTTTTGGTGGCTTCTTGACCATTTTGGGAGTTTCAGAGGTAACCACA
AGAGTAACTGCTGCGCGCTATGGTGTCAAACTTAGTCCATCTTTTCTTGTTCCGTCCAAT
TGGACTGGGTGCCTGGGTGTTATGAATAACTACGAGTCCCTGCTACCAAATAAAAAGGCT
CTATTTGATATTCCAGTTGCTCGTACAGCAAGTGCATACTTGACATCGCTAATACTTGCA
GTTGCTGCTTTTGTGGCTGATGGAAGCTTTAATGGAGGCGACAATGCATTGTACATAAGA
CCTCAGTTCTTTTATAACAATCCGTTGTTCTCCTTCATTCAATACGTTGTTGGACCATAT
ACTGATGATCTTGGGAATGTGCTGCCTTATGCTGTTGAAGGTGTGGGAGTTCCTGTTGAT
CCCCTTGCTTTTGCTGGACTTTTAGGTATGGTTGTTACATCTTTAAACCTGTTACCATGT
GGAAGACTAGAAGGTGGGCGCATTGCACAAGCTATGTTTGGCAGGAGCACAGCTACATTG
CTATCTTTCGCGACTTCCCTATTGCTAGGAATAGGTGGTCTAAGTGGAAGCGTGCTATGT
CTGGCATGGGGACTGTTTGCAACTTTCTTCCGCGGAGGAGAGGAAGTCCCAGCACAAGAC
GAGATCACCCCACTTGGAAATGAGAGATTTGCTTGGGGTTGTGTACTCTTCTTGATGTGT
TTCCTAACACTTTTCCCTAACCTTGGTGGCACATTCTCTAGTTCATTTTTTGGTGATCCA
TACTTCCGCGGTACTCTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400044563
PEP Infomation

pacid=37439794 transcript=PGSC0003DMT400066123 locus=PGSC0003DMG400025737 ID=PGSC0003DMT400066123.v4.03 annot-version=v4.03
Sequence

MATLSATSSSSSSWSLKNRRPHYLPPISSISKNPICRNTLFSFSSYNPKRLNLYVPYKKR
LNFYVKAAEEDEPSSSSSVAVASEENDSPKNDAHIQEGESGAQHETESERIEREKQQEMD
WKTDEEFKKFMGNPSIEAAIKLEKKRADRKLKELDSETTSNPLVGFFKNLVRVSLSKEKE
RLEKAEEAFVALDLNKLRNCFGFDTFFTTDVRRFGDGGIFIGNLRRPIDEVIPKLEKKLS
EAAGREVVLWFMEEKTNDIVKQACVVQPKSEMDLEFESTKLSTPWGYISAVSLAVTTFGT
IALTSGFFLKPDATIDDYLANVVPLFGGFLTILGVSEVTTRVTAARYGVKLSPSFLVPSN
WTGCLGVMNNYESLLPNKKALFDIPVARTASAYLTSLILAVAAFVADGSFNGGDNALYIR
PQFFYNNPLFSFIQYVVGPYTDDLGNVLPYAVEGVGVPVDPLAFAGLLGMVVTSLNLLPC
GRLEGGRIAQAMFGRSTATLLSFATSLLLGIGGLSGSVLCLAWGLFATFFRGGEEVPAQD
EITPLGNERFAWGCVLFLMCFLTLFPNLGGTFSSSFFGDPYFRGTL*

Transcript Sequence

Transcript ID

PGSC0003DMT400066123
Transcript Infomation

pacid=37439794 locus=PGSC0003DMG400025737 ID=PGSC0003DMT400066123.v4.03 annot-version=v4.03
Sequence

ATGGCAACTCTTTCTGCTACTTCATCTTCTTCTTCTTCTTGGTCCCTCAAAAACAGGAGG
CCGCATTACCTACCTCCTATTTCTTCAATTTCCAAAAACCCAATTTGCCGAAATACCCTC
TTCTCGTTTTCCTCGTACAACCCAAAAAGATTGAATCTTTATGTTCCTTACAAAAAAAGA
TTGAATTTTTATGTTAAAGCTGCCGAAGAAGATGAACCCTCATCTTCTTCTTCTGTGGCT
GTAGCTTCAGAAGAAAATGATTCTCCAAAGAATGATGCTCATATTCAAGAGGGTGAGAGT
GGTGCTCAGCATGAGACTGAGTCTGAGAGGATAGAGAGGGAGAAACAGCAAGAAATGGAT
TGGAAAACAGATGAGGAATTCAAGAAGTTTATGGGGAATCCCTCAATTGAGGCTGCTATA
AAACTTGAGAAAAAGAGAGCTGATAGGAAGCTGAAAGAGCTTGATAGTGAAACCACTAGC
AACCCACTTGTGGGCTTCTTTAAAAATTTGGTTCGTGTTAGTTTGTCCAAAGAGAAAGAG
AGGTTGGAAAAAGCAGAAGAAGCTTTTGTAGCTCTTGATCTTAATAAGCTAAGGAATTGC
TTTGGCTTTGATACGTTCTTCACGACTGATGTGAGGAGATTTGGAGATGGGGGGATTTTC
ATTGGGAACTTGAGGAGGCCTATTGATGAAGTAATACCCAAATTGGAGAAGAAGTTATCA
GAGGCTGCTGGACGGGAGGTCGTCTTGTGGTTTATGGAGGAAAAGACAAATGATATTGTA
AAGCAGGCTTGTGTGGTACAACCCAAGTCAGAGATGGATCTTGAATTTGAATCAACCAAA
TTAAGTACTCCTTGGGGATACATCAGTGCTGTATCTTTGGCCGTAACAACTTTTGGCACT
ATAGCTTTGACCAGTGGTTTCTTCCTTAAGCCTGATGCTACGATTGATGATTACTTGGCC
AATGTTGTACCCCTTTTTGGTGGCTTCTTGACCATTTTGGGAGTTTCAGAGGTAACCACA
AGAGTAACTGCTGCGCGCTATGGTGTCAAACTTAGTCCATCTTTTCTTGTTCCGTCCAAT
TGGACTGGGTGCCTGGGTGTTATGAATAACTACGAGTCCCTGCTACCAAATAAAAAGGCT
CTATTTGATATTCCAGTTGCTCGTACAGCAAGTGCATACTTGACATCGCTAATACTTGCA
GTTGCTGCTTTTGTGGCTGATGGAAGCTTTAATGGAGGCGACAATGCATTGTACATAAGA
CCTCAGTTCTTTTATAACAATCCGTTGTTCTCCTTCATTCAATACGTTGTTGGACCATAT
ACTGATGATCTTGGGAATGTGCTGCCTTATGCTGTTGAAGGTGTGGGAGTTCCTGTTGAT
CCCCTTGCTTTTGCTGGACTTTTAGGTATGGTTGTTACATCTTTAAACCTGTTACCATGT
GGAAGACTAGAAGGTGGGCGCATTGCACAAGCTATGTTTGGCAGGAGCACAGCTACATTG
CTATCTTTCGCGACTTCCCTATTGCTAGGAATAGGTGGTCTAAGTGGAAGCGTGCTATGT
CTGGCATGGGGACTGTTTGCAACTTTCTTCCGCGGAGGAGAGGAAGTCCCAGCACAAGAC
GAGATCACCCCACTTGGAAATGAGAGATTTGCTTGGGGTTGTGTACTCTTCTTGATGTGT
TTCCTAACACTTTTCCCTAACCTTGGTGGCACATTCTCTAGTTCATTTTTTGGTGATCCA
TACTTCCGCGGTACTCTGTAA