Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400066112
CDS Infomation

pacid=37441255 polypeptide=PGSC0003DMP400044555 locus=PGSC0003DMG400025734 ID=PGSC0003DMT400066112.v4.03 annot-version=v4.03
Sequence

ATGGCAGTAGTGGGAGATTTAGCTTTGATGGGGACTAAGATTAAGTTAATTGGTAAATTG
GAGAAAAGGGTATTTGGTGTTCCACTTTCTACAAGTCCAAGATTTAGTTTTTCTCAGACT
AGAAATTTGGATGTCAGCAAATCAAGAACTGCAGTCAGAGCAGTGCTGCAGGTTGAGAAA
ATTCAAAGTTCAGGTGAATTGAAAGAAGGGTTTTTAGGCTTTGATGTTGTGTCAGAAAGG
GAGCTTAAAGAAAATGGATTTTTGGGGTTAAGGAAGACAAAGCTTGTGTGTACAATTGGA
CCAGCTTGTTCTTGTATAGATGAGTTGGAGAAATTGGCTATTGCAGGTATGAATGTGGCT
AGGCTAAATATGTGTCATAACTCAAGGGAGTGGCATCAAGATGTTATTAGGAAGATTAAG
AAGTTGAATCAAGAAAAGGGTTATTGTGTATCAGTTATGATTGATACAGAGGGGAATCAA
ATACAAGTTGATCTTGGCTCTTCATCTTCTGTCAAAGCAGAGGAGGCTTCAATCTGGTAC
TTTACTACTGAGAAGTTTGAAGGTTCTCGTCCATTTACAATTCAAGCAAATTATGAAGGT
TTTTCTGAAGGTGTCAATTCTGGTGATGAAATTGTCATTGACGGAGGAATGGCAACTTTT
GAAGTTATAGAGAAAGTTGGTAATGGCTTGCGCTGCAAGTGCACAGACCCCGGTCTACTT
CTGCCTAGAGCTAAGTTGAGTTTTTGGAGAGATGGAAAGCTTTTAGGAAGAGATTATGAT
CTTCCGACTTTATCAACAAAGGATTGGTCAGACATTGTGTTTGGAATATCTGAAAATATC
GATTTCATTGCAGTTTCATTTGTAAAAGACGCGGAGGCAATCACGCATCTGAGGGACTAC
CTCACAACTACATCCTCCAAGGCAATAAAAGTGTTGGCAAAGATAGAGAGCCTAGAGTCT
CTCCGAAGGTTGGAAGAGATTGTTGAGGCTTCTGATGGAATTATGATAGCAAGGGGAGAT
CTAGGAGTTGAGATTCCACTTGAACAGATTCCATCTGTTCAGAAAGATATTACTTATGTT
TGCAGGCAGCTCAACAAGCCCGTTATTGTGGCCTCTCAACTTCTAGAGTCAATGGTCGAA
TACCCCACTCCAACACGAGCAGAGGTTGCAGATGTTTCTGAAGCGGTACGACAGTATGCT
GATGCATTGATGTTATCTGGTGAGTCAGCCATTGGATCATATGGAATGAAGGCTCTTTCT
GTCTTGCGTACAACTAGCACCCGAATGGAACAATCATGTCGCGAAGAGAACAGGCAAACT
TTGTTGCATCAGCGCAAACTTGGAGCATCTTTGCCAGATCAAATTGCTGAGCAAATCTGC
AATTGTGCAGTGGAAATGGCTGACAACCTAGGGGTGGATGCTATATTTGTGTACACAAAG
CATGGGAAGATGGCATCTCTTCTCTCACGCAATCGTCCAAATCCTCCAATATTTGCCTTA
ACGAACGACAACAGCACACAGATGGCTCTCAATTTGCAGTGGGGAGTTACTCCCCTTCTC
ACTGACCTTTCAGACGACATGGAAGGAAACGTTAAGAAAACAGTGGAACTTATAAAAGCA
AAGGGGATGATAAAGAAGGATGATGCTATTTTGGTGGTATCAGATATCATTCCAATTTCT
ACTGCCCAAACAATTTTCCAGTCCATTCAGGTTATGACCATAACATAG

Peptide Sequence

PEP ID

PGSC0003DMP400044555
PEP Infomation

pacid=37441255 transcript=PGSC0003DMT400066112 locus=PGSC0003DMG400025734 ID=PGSC0003DMT400066112.v4.03 annot-version=v4.03
Sequence

MAVVGDLALMGTKIKLIGKLEKRVFGVPLSTSPRFSFSQTRNLDVSKSRTAVRAVLQVEK
IQSSGELKEGFLGFDVVSERELKENGFLGLRKTKLVCTIGPACSCIDELEKLAIAGMNVA
RLNMCHNSREWHQDVIRKIKKLNQEKGYCVSVMIDTEGNQIQVDLGSSSSVKAEEASIWY
FTTEKFEGSRPFTIQANYEGFSEGVNSGDEIVIDGGMATFEVIEKVGNGLRCKCTDPGLL
LPRAKLSFWRDGKLLGRDYDLPTLSTKDWSDIVFGISENIDFIAVSFVKDAEAITHLRDY
LTTTSSKAIKVLAKIESLESLRRLEEIVEASDGIMIARGDLGVEIPLEQIPSVQKDITYV
CRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGSYGMKALS
VLRTTSTRMEQSCREENRQTLLHQRKLGASLPDQIAEQICNCAVEMADNLGVDAIFVYTK
HGKMASLLSRNRPNPPIFALTNDNSTQMALNLQWGVTPLLTDLSDDMEGNVKKTVELIKA
KGMIKKDDAILVVSDIIPISTAQTIFQSIQVMTIT*

Transcript Sequence

Transcript ID

PGSC0003DMT400066112
Transcript Infomation

pacid=37441255 locus=PGSC0003DMG400025734 ID=PGSC0003DMT400066112.v4.03 annot-version=v4.03
Sequence

ATGGCAGTAGTGGGAGATTTAGCTTTGATGGGGACTAAGATTAAGTTAATTGGTAAATTG
GAGAAAAGGGTATTTGGTGTTCCACTTTCTACAAGTCCAAGATTTAGTTTTTCTCAGACT
AGAAATTTGGATGTCAGCAAATCAAGAACTGCAGTCAGAGCAGTGCTGCAGGTTGAGAAA
ATTCAAAGTTCAGGTGAATTGAAAGAAGGGTTTTTAGGCTTTGATGTTGTGTCAGAAAGG
GAGCTTAAAGAAAATGGATTTTTGGGGTTAAGGAAGACAAAGCTTGTGTGTACAATTGGA
CCAGCTTGTTCTTGTATAGATGAGTTGGAGAAATTGGCTATTGCAGGTATGAATGTGGCT
AGGCTAAATATGTGTCATAACTCAAGGGAGTGGCATCAAGATGTTATTAGGAAGATTAAG
AAGTTGAATCAAGAAAAGGGTTATTGTGTATCAGTTATGATTGATACAGAGGGGAATCAA
ATACAAGTTGATCTTGGCTCTTCATCTTCTGTCAAAGCAGAGGAGGCTTCAATCTGGTAC
TTTACTACTGAGAAGTTTGAAGGTTCTCGTCCATTTACAATTCAAGCAAATTATGAAGGT
TTTTCTGAAGGTGTCAATTCTGGTGATGAAATTGTCATTGACGGAGGAATGGCAACTTTT
GAAGTTATAGAGAAAGTTGGTAATGGCTTGCGCTGCAAGTGCACAGACCCCGGTCTACTT
CTGCCTAGAGCTAAGTTGAGTTTTTGGAGAGATGGAAAGCTTTTAGGAAGAGATTATGAT
CTTCCGACTTTATCAACAAAGGATTGGTCAGACATTGTGTTTGGAATATCTGAAAATATC
GATTTCATTGCAGTTTCATTTGTAAAAGACGCGGAGGCAATCACGCATCTGAGGGACTAC
CTCACAACTACATCCTCCAAGGCAATAAAAGTGTTGGCAAAGATAGAGAGCCTAGAGTCT
CTCCGAAGGTTGGAAGAGATTGTTGAGGCTTCTGATGGAATTATGATAGCAAGGGGAGAT
CTAGGAGTTGAGATTCCACTTGAACAGATTCCATCTGTTCAGAAAGATATTACTTATGTT
TGCAGGCAGCTCAACAAGCCCGTTATTGTGGCCTCTCAACTTCTAGAGTCAATGGTCGAA
TACCCCACTCCAACACGAGCAGAGGTTGCAGATGTTTCTGAAGCGGTACGACAGTATGCT
GATGCATTGATGTTATCTGGTGAGTCAGCCATTGGATCATATGGAATGAAGGCTCTTTCT
GTCTTGCGTACAACTAGCACCCGAATGGAACAATCATGTCGCGAAGAGAACAGGCAAACT
TTGTTGCATCAGCGCAAACTTGGAGCATCTTTGCCAGATCAAATTGCTGAGCAAATCTGC
AATTGTGCAGTGGAAATGGCTGACAACCTAGGGGTGGATGCTATATTTGTGTACACAAAG
CATGGGAAGATGGCATCTCTTCTCTCACGCAATCGTCCAAATCCTCCAATATTTGCCTTA
ACGAACGACAACAGCACACAGATGGCTCTCAATTTGCAGTGGGGAGTTACTCCCCTTCTC
ACTGACCTTTCAGACGACATGGAAGGAAACGTTAAGAAAACAGTGGAACTTATAAAAGCA
AAGGGGATGATAAAGAAGGATGATGCTATTTTGGTGGTATCAGATATCATTCCAATTTCT
ACTGCCCAAACAATTTTCCAGTCCATTCAGGTTATGACCATAACATAG