Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400066000
CDS Infomation

pacid=37430385 polypeptide=PGSC0003DMP400044501 locus=PGSC0003DMG400025692 ID=PGSC0003DMT400066000.v4.03 annot-version=v4.03
Sequence

ATGGATGATGAATATGAAAAATTCATAAGAAGAATGAATCCACCAAGAGTGGTGATTGAC
AATGATTCTTGCAAAAATGCTACTGTTATACAGGTGGATAGTGCTAACAAACATGGAATA
CTCTTAGAGGTGGTACAAGTTTTAACTGATCTTAATCTTGTTATCACTAAGGCTTATATT
TCATCTGATGGTGGATGGTTCATGGATGTTTTCAATGTGACTAATCAAGAAGGGAACAAG
ATTACAGACGAAGCGATGTTGGATTATATCATGAAGTCTCTTGGTCCGGATTCTAGTTTC
GCGTCATCAATGAGACGATCAGTTGGAGTTACTGCAGGAATGGACTACACTTCAATTGAG
TTAATCGGAAGTGATAGACCGGGGCTATTGTCTGAGATGAGTGCTGTCCTCACGAATCTC
AAATGCAATGTGGTTAATGCTGAGGTGTGGACTCATAACACCCGAGCAGCAGCTATAATG
CAAGTTAAGGATGAGGAAACGGGAGGTACAATTAATGATCCGGAAAGGTTGTCTATGATG
AAGCAACTTTTGTGCAATGTACTTAGATGTAGCAATAAATTAAGGGATGCAAAAACAATA
GTATCTGACGGGGTCTCTCATACCGAGAGAAGGCTTCACCAGCTAATGTTTGCAGACCGA
GACTATGAACGTGCTGCTGGTGAAGTATTGGATGAAAAAGAGAGGCCTAATGTGAGTGTC
GTTAATTGGCACGACAAGGACTACTCCGTTGTGACAATCCGGTGCAAGGATAGACCAAAG
CTTCTATTTGATACAATTTGTACATTGACCGATATGCAGTATGTGGTTTTCCATGGTAAT
GTTGATGCTGAAGGACCAGTAGCCCAACAGGAGTACTGCATAAGACATATAGATGGTTCC
CCGGTGAAATCAGATGCAGAACGACAACGAGTGATTCAATGTCTTGAAGCAGCTATAGAA
AGAAGGGTATCTGAGGGATTGAAACTAGAACTATGTACCACGGACAGAGTAGGACTACTC
TCCGATGTTACTAGGATCTTCCGCGAGAACAGCCTCACCGTCACCAGAGCAGAAGTGACA
ACTAGAGCTGGCAAAGCTGTTAATATATTCTACGTTCGCGATTCATCAGGATATCCTGTT
GATGCTAAGATCATAGAATCCATTCGTCAGACAATCGGACAGACGATTCTTAGTGTGAAA
GGCAACATTGCAGAGTTAAATCCAGTTCCACAAGAATCTCCAACCAGGTTCCTTTTTGGT
GGTCTATTCAAGTCTAGATCCTTTTGTAATTTCGGGTTGGTTAAGTCGTATTCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400044501
PEP Infomation

pacid=37430385 transcript=PGSC0003DMT400066000 locus=PGSC0003DMG400025692 ID=PGSC0003DMT400066000.v4.03 annot-version=v4.03
Sequence

MDDEYEKFIRRMNPPRVVIDNDSCKNATVIQVDSANKHGILLEVVQVLTDLNLVITKAYI
SSDGGWFMDVFNVTNQEGNKITDEAMLDYIMKSLGPDSSFASSMRRSVGVTAGMDYTSIE
LIGSDRPGLLSEMSAVLTNLKCNVVNAEVWTHNTRAAAIMQVKDEETGGTINDPERLSMM
KQLLCNVLRCSNKLRDAKTIVSDGVSHTERRLHQLMFADRDYERAAGEVLDEKERPNVSV
VNWHDKDYSVVTIRCKDRPKLLFDTICTLTDMQYVVFHGNVDAEGPVAQQEYCIRHIDGS
PVKSDAERQRVIQCLEAAIERRVSEGLKLELCTTDRVGLLSDVTRIFRENSLTVTRAEVT
TRAGKAVNIFYVRDSSGYPVDAKIIESIRQTIGQTILSVKGNIAELNPVPQESPTRFLFG
GLFKSRSFCNFGLVKSYS*

Transcript Sequence

Transcript ID

PGSC0003DMT400066000
Transcript Infomation

pacid=37430385 locus=PGSC0003DMG400025692 ID=PGSC0003DMT400066000.v4.03 annot-version=v4.03
Sequence

ATGGATGATGAATATGAAAAATTCATAAGAAGAATGAATCCACCAAGAGTGGTGATTGAC
AATGATTCTTGCAAAAATGCTACTGTTATACAGGTGGATAGTGCTAACAAACATGGAATA
CTCTTAGAGGTGGTACAAGTTTTAACTGATCTTAATCTTGTTATCACTAAGGCTTATATT
TCATCTGATGGTGGATGGTTCATGGATGTTTTCAATGTGACTAATCAAGAAGGGAACAAG
ATTACAGACGAAGCGATGTTGGATTATATCATGAAGTCTCTTGGTCCGGATTCTAGTTTC
GCGTCATCAATGAGACGATCAGTTGGAGTTACTGCAGGAATGGACTACACTTCAATTGAG
TTAATCGGAAGTGATAGACCGGGGCTATTGTCTGAGATGAGTGCTGTCCTCACGAATCTC
AAATGCAATGTGGTTAATGCTGAGGTGTGGACTCATAACACCCGAGCAGCAGCTATAATG
CAAGTTAAGGATGAGGAAACGGGAGGTACAATTAATGATCCGGAAAGGTTGTCTATGATG
AAGCAACTTTTGTGCAATGTACTTAGATGTAGCAATAAATTAAGGGATGCAAAAACAATA
GTATCTGACGGGGTCTCTCATACCGAGAGAAGGCTTCACCAGCTAATGTTTGCAGACCGA
GACTATGAACGTGCTGCTGGTGAAGTATTGGATGAAAAAGAGAGGCCTAATGTGAGTGTC
GTTAATTGGCACGACAAGGACTACTCCGTTGTGACAATCCGGTGCAAGGATAGACCAAAG
CTTCTATTTGATACAATTTGTACATTGACCGATATGCAGTATGTGGTTTTCCATGGTAAT
GTTGATGCTGAAGGACCAGTAGCCCAACAGGAGTACTGCATAAGACATATAGATGGTTCC
CCGGTGAAATCAGATGCAGAACGACAACGAGTGATTCAATGTCTTGAAGCAGCTATAGAA
AGAAGGGTATCTGAGGGATTGAAACTAGAACTATGTACCACGGACAGAGTAGGACTACTC
TCCGATGTTACTAGGATCTTCCGCGAGAACAGCCTCACCGTCACCAGAGCAGAAGTGACA
ACTAGAGCTGGCAAAGCTGTTAATATATTCTACGTTCGCGATTCATCAGGATATCCTGTT
GATGCTAAGATCATAGAATCCATTCGTCAGACAATCGGACAGACGATTCTTAGTGTGAAA
GGCAACATTGCAGAGTTAAATCCAGTTCCACAAGAATCTCCAACCAGGTTCCTTTTTGGT
GGTCTATTCAAGTCTAGATCCTTTTGTAATTTCGGGTTGGTTAAGTCGTATTCTTGA