Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400065969
CDS Infomation

pacid=37476577 polypeptide=PGSC0003DMP400044489 locus=PGSC0003DMG400025682 ID=PGSC0003DMT400065969.v4.03 annot-version=v4.03
Sequence

ATGGTGCGGGTCACTCTGTTTCTGCTGCTGCTACTTGTATCCGGTGTAGTCCCCGACCAC
TTCATTGTTGAAACTCTTCCTGGATTTCATGGAAAACTTCCATTTACACTCGAAACTGGT
TACATTGGTGTTGGAGAAGAGGAAAAAGTGCAGCTATTTTATTTCTTTGTACCATCTGAG
AGAGACCCACTAAATGACCCTCTCATGATTTGGCTCACTGGAGGTCCTGGTTGTTCTGGT
CTGTCTTCCTTTGTATATGAGATTGGCCCTTTAACCTTTGATTATGCAAATTCTAATGGA
AATTTCCCGAAACTGGAGTTGAACTCATATTCTTGGACCAAGGTGGCCAACATAATATTT
ATAGATCAACCTGCTGGCACAGGCTACTCATATGCAAACACTTCAGAAGCTTACAACTGC
AATGATACCCTCTCTGTAACTCTAACTTATGACTTCCTTAGAAAGTGGCTTATGGATCAT
CCCGAGTATCTCAACAATCCACTATATGTTGGTGGTGATTCCTACTCAGGCATTTTTGTT
GCACCGCTTACTCGCAAAATATACGATGGTATTGAAGTTGGTGACAAGCCTCGACTGAAT
ATCAAAGGATACATACAAGGCAATGCTCTAACAGATAGATACATCGACTCCAATGGTAGA
ATCAAATATGCTAATCGTATGGGACTTATTTCAGATAAGATCTATCAGTCCGCTAAAACA
AATTGCAATGGGAGTTACTTTGACGTTGATCCACATAACATATTATGTCTAAATGATCTT
CAGAAAGTAACAAAGTGTCTCAAGAACATACGACGGGCGCAAATTTTAGAGCCTTACTGT
GACCTTCCTTATTTAATGGGCAATCTCCAAGAAACTCCTACAAATGGCCAGTCAGTATTT
CCAATTGCAGGACCATGGTGTCGAGAAAAAAATTACATATACTCGTATGTTTGGGCAAAT
GATAAAGTTGTCCAGAAAGCACTAAACGTTCGTGAGGGAACGACATTGGAGTGGGTGAGA
TGCAATGAAAGCATGCATTATAGAGGTAAGGAGAGAACCGAGTCATATGTGTATGATGTC
CCAAGTGCCATTGATGATCATCGCCATCTCACCAGCAAATCCTGTCGAGCACTAATTTAT
AGTGGTGACCATGACATGGTTGTTCCTCATTTGAGTACGGAAGAATGGATAGACACTTTG
AAACTGCCAATTGCAGATGATTGGGAGCCTTGGTTTGTTGACGCTCAAGTTGCAGGATAC
AAAGTGAAGTATTTACAAAATGATTATGAGCTGACATATGCAACTGTTAAGGGTGCGGGT
CATACAGCTCCTGAATACAAGCCGGAACAATGCCTGCCCATGGTTGATAGGTGGTTTTCC
GGTGACCCTCTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400044489
PEP Infomation

pacid=37476577 transcript=PGSC0003DMT400065969 locus=PGSC0003DMG400025682 ID=PGSC0003DMT400065969.v4.03 annot-version=v4.03
Sequence

MVRVTLFLLLLLVSGVVPDHFIVETLPGFHGKLPFTLETGYIGVGEEEKVQLFYFFVPSE
RDPLNDPLMIWLTGGPGCSGLSSFVYEIGPLTFDYANSNGNFPKLELNSYSWTKVANIIF
IDQPAGTGYSYANTSEAYNCNDTLSVTLTYDFLRKWLMDHPEYLNNPLYVGGDSYSGIFV
APLTRKIYDGIEVGDKPRLNIKGYIQGNALTDRYIDSNGRIKYANRMGLISDKIYQSAKT
NCNGSYFDVDPHNILCLNDLQKVTKCLKNIRRAQILEPYCDLPYLMGNLQETPTNGQSVF
PIAGPWCREKNYIYSYVWANDKVVQKALNVREGTTLEWVRCNESMHYRGKERTESYVYDV
PSAIDDHRHLTSKSCRALIYSGDHDMVVPHLSTEEWIDTLKLPIADDWEPWFVDAQVAGY
KVKYLQNDYELTYATVKGAGHTAPEYKPEQCLPMVDRWFSGDPL*

Transcript Sequence

Transcript ID

PGSC0003DMT400065969
Transcript Infomation

pacid=37476577 locus=PGSC0003DMG400025682 ID=PGSC0003DMT400065969.v4.03 annot-version=v4.03
Sequence

ATGGTGCGGGTCACTCTGTTTCTGCTGCTGCTACTTGTATCCGGTGTAGTCCCCGACCAC
TTCATTGTTGAAACTCTTCCTGGATTTCATGGAAAACTTCCATTTACACTCGAAACTGGT
TACATTGGTGTTGGAGAAGAGGAAAAAGTGCAGCTATTTTATTTCTTTGTACCATCTGAG
AGAGACCCACTAAATGACCCTCTCATGATTTGGCTCACTGGAGGTCCTGGTTGTTCTGGT
CTGTCTTCCTTTGTATATGAGATTGGCCCTTTAACCTTTGATTATGCAAATTCTAATGGA
AATTTCCCGAAACTGGAGTTGAACTCATATTCTTGGACCAAGGTGGCCAACATAATATTT
ATAGATCAACCTGCTGGCACAGGCTACTCATATGCAAACACTTCAGAAGCTTACAACTGC
AATGATACCCTCTCTGTAACTCTAACTTATGACTTCCTTAGAAAGTGGCTTATGGATCAT
CCCGAGTATCTCAACAATCCACTATATGTTGGTGGTGATTCCTACTCAGGCATTTTTGTT
GCACCGCTTACTCGCAAAATATACGATGGTATTGAAGTTGGTGACAAGCCTCGACTGAAT
ATCAAAGGATACATACAAGGCAATGCTCTAACAGATAGATACATCGACTCCAATGGTAGA
ATCAAATATGCTAATCGTATGGGACTTATTTCAGATAAGATCTATCAGTCCGCTAAAACA
AATTGCAATGGGAGTTACTTTGACGTTGATCCACATAACATATTATGTCTAAATGATCTT
CAGAAAGTAACAAAGTGTCTCAAGAACATACGACGGGCGCAAATTTTAGAGCCTTACTGT
GACCTTCCTTATTTAATGGGCAATCTCCAAGAAACTCCTACAAATGGCCAGTCAGTATTT
CCAATTGCAGGACCATGGTGTCGAGAAAAAAATTACATATACTCGTATGTTTGGGCAAAT
GATAAAGTTGTCCAGAAAGCACTAAACGTTCGTGAGGGAACGACATTGGAGTGGGTGAGA
TGCAATGAAAGCATGCATTATAGAGGTAAGGAGAGAACCGAGTCATATGTGTATGATGTC
CCAAGTGCCATTGATGATCATCGCCATCTCACCAGCAAATCCTGTCGAGCACTAATTTAT
AGTGGTGACCATGACATGGTTGTTCCTCATTTGAGTACGGAAGAATGGATAGACACTTTG
AAACTGCCAATTGCAGATGATTGGGAGCCTTGGTTTGTTGACGCTCAAGTTGCAGGATAC
AAAGTGAAGTATTTACAAAATGATTATGAGCTGACATATGCAACTGTTAAGGGTGCGGGT
CATACAGCTCCTGAATACAAGCCGGAACAATGCCTGCCCATGGTTGATAGGTGGTTTTCC
GGTGACCCTCTTTAA