Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400065934
CDS Infomation

pacid=37473492 polypeptide=PGSC0003DMP400044469 locus=PGSC0003DMG400025663 ID=PGSC0003DMT400065934.v4.03 annot-version=v4.03
Sequence

ATGACTAAAGAAGACTGTATGGAGAAAGACGAAATGGATTCGCTGTTTGAGGGAATGGTT
CTCTTCAATCCGAGTGCAGATGTCGGACATCATGCCCAATTATCCACCATAGCTGATGCG
GATGCGGATGCGGATGCATCCACTTCTTCCCCATCGCAGGTATCTAATGAACCCCTTGAT
GAGAACCTTTTCTCGGATCTCACTCTCATGACTCCCTCTCAATCCCTACTGCTTGATGAA
GAAGAAGATGAAACTCAACCTCCATCTGATCTGCCGTTGGTATCTCGGCAAAATTCCAGT
AGGAGAAGAAAAAAAGCTGGATTAAGGATAGGATATGGCAGAGATAGAGATTATGCTGAC
CATCGGCCACAATCGTCCCATACCCACCTCAACTCTCACTCTGACATAAGCTCCGTTCTT
GCTGCTATTCAAGATAAAGAAGCAAACCAAGAACAAAAATTTGAACAGGAAGCTGAGGAG
TCGAGGGATGAAGAAAAGAACATCTCTTCTATCACCACAGCCAAAGAGCAGGATTCCTCA
ACAGAAAAGCTTAACAATGGCACTGACTCTCTCAACTACCCTAATAAAAAGCTTAATTTG
TCCTCGGCTACTCCTATTTCATCTACACTTGATGACGACGAATACATGGATGCTGGTCAT
CTAAATGTTATAGCAAACCCAGTGGAGTTGAAATTCGATCAAATCAGAGCCACCATTGCA
GACAAGCTTAAGTTGGCCCAGGAGGCGGTAATCTCCGTCTCTGCACTGCGGAAAGAATCT
ATCCGAAGGAGAAGAGAAGCTGTCGAAGAATTCAATGGGGCATCTACCCGCCATAGGGAC
TTGGAGAAGAAGCTGGATGAAGCTTGTGAAGCAGAGGATTTTGAGACCGCTGAAAGGGTC
AGTGAGAATCTTGCTTCCGCGGAGAAGGAAAAGGAACAGTCGGTCATCCTCCTCAGAGAT
GCCGAGACATACTGTGATGTCATTGACACTAAGATGCAGGACGTTCTTGTGTCCCTTATT
CAAGCTGAGGAGGAATGTGTTTATTTGCTACGAAGATTTTCAGAGGAAGCTGCAAGTAAT
GCAGATTCAATCCTGATGGATGCAGAAACAATATCTTCAAAAGATGGTGCTGAGTGGCTT
TCATCAGTTGAAGCCATAGAAGTCAGCAAATTTGAATTAGAAATTCAATCCCAACTAGTT
CACGGAGCTAAATCTGTTTTGAATGAATCAATTGATCACTCAGTGGAGGATGATCGGAGG
GAAATAGATGTTCTTTGCAAGAGAAAAGAAGTATTGGCAGAGGAACTGAGGGAACTGCTT
GCCTTTGTGAAAGAGAAGGAAGCAGAAATTGCAGAAAATGATGCTCTCATTCAAAAAGTT
GAGCATAGGATTGATGGGGTTGTCTCATGCTTTAAAGAGGTTCAAGAAAGTATATATAAT
AATTATGATAAATTGCAGTCACACCTTTCTGAGCTGATGGCTGAGAATGATGTTTTACTG
AAAAGAAAGAAAGATATTGATAGTTACCTTTCTCAGCAAGAATCAAGAGGAGAAAAGATT
AAGAATCTTTCCAGGATTTCTGCAGATGAAGCAAACGTGTATGAAGAAGTTGTTGGTCTT
AGAAAGAGTCTGGCTGTGTTCATCTCGAAATCCAAGGCCTATAGACTGAACCTTGCCAAA
AGTGAAGAAAGGATTTCAGAGGAGGTGCAAATTCTCAAGCAGGATTTTTTTGCTGCAAGA
GCTTCACTTCAGGTGTTATCTTCAACTAAGTCAAGCATCCAGCAGGAAGTTGAATCCTGT
AAGCAGCGCCTTCTTTTCATTGACAGGAGACTTCCGGAGTTGGAGGCAGAGAAGAAGGTT
GCTGCTGCTACAAGAAATTTTAAAGAAGCAGCACGATTATCTGCAGAAGCTAAGGCCTTG
TGCATTGAAAAGGAAGAAATACAGAGGAAAATGGACAGTACTGAGTCAGAGCTTAAGAAG
CTTGAGGAAGAAATATGCCACACGATTGATAGGATGCAAGAAACTGAAGTGCAGATTTCA
TCGAAGGAAAAAGAGTTGGCTATGGCTAGATTCCAGAGGCTAATTCTAATTGCTAGAGAG
GCTAGAGCTGAGAGATCAGCTGCTTTGGAGTTGGGTGATCATGAAGAAGCTGAATCTTTA
ATGGCAGAGGCTGATGCTGCGGAGGTTGAAGCAAGAAAACTTCAACCAATTTACAATTTC
AATGAAGAAGCGATTGAAAATTTACCGGAAGTTTTCATATCAGCTGAGCTTGTATCCACG
CTTGGTAACAAGCAATTGGCTGAGTTGGCTGCTTCTGCAAATATAGCGGCATCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400044469
PEP Infomation

pacid=37473492 transcript=PGSC0003DMT400065934 locus=PGSC0003DMG400025663 ID=PGSC0003DMT400065934.v4.03 annot-version=v4.03
Sequence

MTKEDCMEKDEMDSLFEGMVLFNPSADVGHHAQLSTIADADADADASTSSPSQVSNEPLD
ENLFSDLTLMTPSQSLLLDEEEDETQPPSDLPLVSRQNSSRRRKKAGLRIGYGRDRDYAD
HRPQSSHTHLNSHSDISSVLAAIQDKEANQEQKFEQEAEESRDEEKNISSITTAKEQDSS
TEKLNNGTDSLNYPNKKLNLSSATPISSTLDDDEYMDAGHLNVIANPVELKFDQIRATIA
DKLKLAQEAVISVSALRKESIRRRREAVEEFNGASTRHRDLEKKLDEACEAEDFETAERV
SENLASAEKEKEQSVILLRDAETYCDVIDTKMQDVLVSLIQAEEECVYLLRRFSEEAASN
ADSILMDAETISSKDGAEWLSSVEAIEVSKFELEIQSQLVHGAKSVLNESIDHSVEDDRR
EIDVLCKRKEVLAEELRELLAFVKEKEAEIAENDALIQKVEHRIDGVVSCFKEVQESIYN
NYDKLQSHLSELMAENDVLLKRKKDIDSYLSQQESRGEKIKNLSRISADEANVYEEVVGL
RKSLAVFISKSKAYRLNLAKSEERISEEVQILKQDFFAARASLQVLSSTKSSIQQEVESC
KQRLLFIDRRLPELEAEKKVAAATRNFKEAARLSAEAKALCIEKEEIQRKMDSTESELKK
LEEEICHTIDRMQETEVQISSKEKELAMARFQRLILIAREARAERSAALELGDHEEAESL
MAEADAAEVEARKLQPIYNFNEEAIENLPEVFISAELVSTLGNKQLAELAASANIAAS*

Transcript Sequence

Transcript ID

PGSC0003DMT400065934
Transcript Infomation

pacid=37473492 locus=PGSC0003DMG400025663 ID=PGSC0003DMT400065934.v4.03 annot-version=v4.03
Sequence

ATGACTAAAGAAGACTGTATGGAGAAAGACGAAATGGATTCGCTGTTTGAGGGAATGGTT
CTCTTCAATCCGAGTGCAGATGTCGGACATCATGCCCAATTATCCACCATAGCTGATGCG
GATGCGGATGCGGATGCATCCACTTCTTCCCCATCGCAGGTATCTAATGAACCCCTTGAT
GAGAACCTTTTCTCGGATCTCACTCTCATGACTCCCTCTCAATCCCTACTGCTTGATGAA
GAAGAAGATGAAACTCAACCTCCATCTGATCTGCCGTTGGTATCTCGGCAAAATTCCAGT
AGGAGAAGAAAAAAAGCTGGATTAAGGATAGGATATGGCAGAGATAGAGATTATGCTGAC
CATCGGCCACAATCGTCCCATACCCACCTCAACTCTCACTCTGACATAAGCTCCGTTCTT
GCTGCTATTCAAGATAAAGAAGCAAACCAAGAACAAAAATTTGAACAGGAAGCTGAGGAG
TCGAGGGATGAAGAAAAGAACATCTCTTCTATCACCACAGCCAAAGAGCAGGATTCCTCA
ACAGAAAAGCTTAACAATGGCACTGACTCTCTCAACTACCCTAATAAAAAGCTTAATTTG
TCCTCGGCTACTCCTATTTCATCTACACTTGATGACGACGAATACATGGATGCTGGTCAT
CTAAATGTTATAGCAAACCCAGTGGAGTTGAAATTCGATCAAATCAGAGCCACCATTGCA
GACAAGCTTAAGTTGGCCCAGGAGGCGGTAATCTCCGTCTCTGCACTGCGGAAAGAATCT
ATCCGAAGGAGAAGAGAAGCTGTCGAAGAATTCAATGGGGCATCTACCCGCCATAGGGAC
TTGGAGAAGAAGCTGGATGAAGCTTGTGAAGCAGAGGATTTTGAGACCGCTGAAAGGGTC
AGTGAGAATCTTGCTTCCGCGGAGAAGGAAAAGGAACAGTCGGTCATCCTCCTCAGAGAT
GCCGAGACATACTGTGATGTCATTGACACTAAGATGCAGGACGTTCTTGTGTCCCTTATT
CAAGCTGAGGAGGAATGTGTTTATTTGCTACGAAGATTTTCAGAGGAAGCTGCAAGTAAT
GCAGATTCAATCCTGATGGATGCAGAAACAATATCTTCAAAAGATGGTGCTGAGTGGCTT
TCATCAGTTGAAGCCATAGAAGTCAGCAAATTTGAATTAGAAATTCAATCCCAACTAGTT
CACGGAGCTAAATCTGTTTTGAATGAATCAATTGATCACTCAGTGGAGGATGATCGGAGG
GAAATAGATGTTCTTTGCAAGAGAAAAGAAGTATTGGCAGAGGAACTGAGGGAACTGCTT
GCCTTTGTGAAAGAGAAGGAAGCAGAAATTGCAGAAAATGATGCTCTCATTCAAAAAGTT
GAGCATAGGATTGATGGGGTTGTCTCATGCTTTAAAGAGGTTCAAGAAAGTATATATAAT
AATTATGATAAATTGCAGTCACACCTTTCTGAGCTGATGGCTGAGAATGATGTTTTACTG
AAAAGAAAGAAAGATATTGATAGTTACCTTTCTCAGCAAGAATCAAGAGGAGAAAAGATT
AAGAATCTTTCCAGGATTTCTGCAGATGAAGCAAACGTGTATGAAGAAGTTGTTGGTCTT
AGAAAGAGTCTGGCTGTGTTCATCTCGAAATCCAAGGCCTATAGACTGAACCTTGCCAAA
AGTGAAGAAAGGATTTCAGAGGAGGTGCAAATTCTCAAGCAGGATTTTTTTGCTGCAAGA
GCTTCACTTCAGGTGTTATCTTCAACTAAGTCAAGCATCCAGCAGGAAGTTGAATCCTGT
AAGCAGCGCCTTCTTTTCATTGACAGGAGACTTCCGGAGTTGGAGGCAGAGAAGAAGGTT
GCTGCTGCTACAAGAAATTTTAAAGAAGCAGCACGATTATCTGCAGAAGCTAAGGCCTTG
TGCATTGAAAAGGAAGAAATACAGAGGAAAATGGACAGTACTGAGTCAGAGCTTAAGAAG
CTTGAGGAAGAAATATGCCACACGATTGATAGGATGCAAGAAACTGAAGTGCAGATTTCA
TCGAAGGAAAAAGAGTTGGCTATGGCTAGATTCCAGAGGCTAATTCTAATTGCTAGAGAG
GCTAGAGCTGAGAGATCAGCTGCTTTGGAGTTGGGTGATCATGAAGAAGCTGAATCTTTA
ATGGCAGAGGCTGATGCTGCGGAGGTTGAAGCAAGAAAACTTCAACCAATTTACAATTTC
AATGAAGAAGCGATTGAAAATTTACCGGAAGTTTTCATATCAGCTGAGCTTGTATCCACG
CTTGGTAACAAGCAATTGGCTGAGTTGGCTGCTTCTGCAAATATAGCGGCATCATGA