Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400065886
CDS Infomation

pacid=37465155 polypeptide=PGSC0003DMP400044436 locus=PGSC0003DMG400025646 ID=PGSC0003DMT400065886.v4.03 annot-version=v4.03
Sequence

ATGGCTGAAACAGAGCATACCCATCAGCCCCCACTCACGGCTGAGGAAGATATCCTCCCC
CCACCTTCACCAGAACCACTTCTTGCTTCAGTTGAAGTTGAATCAGTGGTAGAAGCTGTA
GAGGAGCATCACTCTGTTGTTACTGTTGTTGAAAAGGAAGCTCCTTTAACTGAACCTCCA
CAAGAACCAACAACAACAACTCTTGTTGAAGCTCAACACGTCTCTCTTACTCTTCCTGAG
AAAGAACTTACTGAATCTGACAAATCTAAACCTGTTGAAGAGAAAAAGATCCCTCAATCT
TTGATTTCATTTAAAGAAGAAAGCAATAAAGTTTCAGATCTATCTGATTCTGAGGTAAAG
GCACTTGAAGAACTTAAATTTCTTGTTCAAGAAGCTATTAAAGATCAGACCTTTACTACT
GGAACAACAGATTTGCCTCAGGAAGTATCCATTTGGGGTGTGCCACTATTGAAAGATGAT
AGGAGTGATGTTATTCTGCTTAAGTTTCTTAGAGCTAGAGATTTCAAGGTTAAGGAGTCA
TTTGCTATGTTAAAGAACACTATTTTATGGAGAAAGGAGTTTAACATTGAAGAACTAGTA
GATGAAAATCTTGGGGATGATCTTGAAAAAGTAGTGTTTATGGATGGTCATGACAAAGAG
GGACACCCTGTTTGTTATAATGTGTATGGGGAGTTTCAGAATAAGGAATTGTATAATAAA
ACATTTGGAGATGAGGAGAAGAGAAACAAGTTTTTGCGCTGGAGGATTCAGTTCTTGGAG
AGGAGTATAAGGAAGCTGGATTTCAGTCCTGGTGGAATCAATACTATATTTCAAGTCAGT
GACCTCAAGAACTCACCTGGTCCAGGGAAAAGGGAACTTCGAATTGCTACTAGGCAGGCC
TTGCAATTGCTTCAGGATAATTATCCGGAATTCGTTGCTAAGCAGGTGTTTATCAACGTC
CCTTGGTGGTATTTAGCTTTCTACACAATGATCAGCCCATTCATGACGCAGAGAACAAAA
AGCAAGTTTGTATTTGCTGGTCCATCAAAGACTGCAGAAACTCTTTACAAGTATATAACT
CCTGAGCAAGTACCTGTTCAATATGGGGGCCTCAGCGTCGATTACTGTGAATGCAATCCC
GAGTTCACTTCCAATGATCCAGTCACAGAGATCATTGTTAAACCTGCAACAAAGCAAACC
GTGGAGATCATTGTAAATGAGAAGTGCATTATTGTCTGGGAGCTACGCGTATTGGGTTGG
GAGGTGACATATAGTGCTGAATATGTGCCGAATACAGATAGTGGATACACTGTGAACATA
CAGAAGCCTAGGAAGATGACCACAGCTGATGAACCTGTTGTTAGCAGCAGCTTCAAGATT
GTCGAGCTAGGTAAGATACTGTTGACGATTGACAACCCAACTTCAAAGAAGAAGAAACTT
CTGTACAGGTTCAAGGATAAGCCCTATTCTGATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400044436
PEP Infomation

pacid=37465155 transcript=PGSC0003DMT400065886 locus=PGSC0003DMG400025646 ID=PGSC0003DMT400065886.v4.03 annot-version=v4.03
Sequence

MAETEHTHQPPLTAEEDILPPPSPEPLLASVEVESVVEAVEEHHSVVTVVEKEAPLTEPP
QEPTTTTLVEAQHVSLTLPEKELTESDKSKPVEEKKIPQSLISFKEESNKVSDLSDSEVK
ALEELKFLVQEAIKDQTFTTGTTDLPQEVSIWGVPLLKDDRSDVILLKFLRARDFKVKES
FAMLKNTILWRKEFNIEELVDENLGDDLEKVVFMDGHDKEGHPVCYNVYGEFQNKELYNK
TFGDEEKRNKFLRWRIQFLERSIRKLDFSPGGINTIFQVSDLKNSPGPGKRELRIATRQA
LQLLQDNYPEFVAKQVFINVPWWYLAFYTMISPFMTQRTKSKFVFAGPSKTAETLYKYIT
PEQVPVQYGGLSVDYCECNPEFTSNDPVTEIIVKPATKQTVEIIVNEKCIIVWELRVLGW
EVTYSAEYVPNTDSGYTVNIQKPRKMTTADEPVVSSSFKIVELGKILLTIDNPTSKKKKL
LYRFKDKPYSD*

Transcript Sequence

Transcript ID

PGSC0003DMT400065886
Transcript Infomation

pacid=37465155 locus=PGSC0003DMG400025646 ID=PGSC0003DMT400065886.v4.03 annot-version=v4.03
Sequence

ATGGCTGAAACAGAGCATACCCATCAGCCCCCACTCACGGCTGAGGAAGATATCCTCCCC
CCACCTTCACCAGAACCACTTCTTGCTTCAGTTGAAGTTGAATCAGTGGTAGAAGCTGTA
GAGGAGCATCACTCTGTTGTTACTGTTGTTGAAAAGGAAGCTCCTTTAACTGAACCTCCA
CAAGAACCAACAACAACAACTCTTGTTGAAGCTCAACACGTCTCTCTTACTCTTCCTGAG
AAAGAACTTACTGAATCTGACAAATCTAAACCTGTTGAAGAGAAAAAGATCCCTCAATCT
TTGATTTCATTTAAAGAAGAAAGCAATAAAGTTTCAGATCTATCTGATTCTGAGGTAAAG
GCACTTGAAGAACTTAAATTTCTTGTTCAAGAAGCTATTAAAGATCAGACCTTTACTACT
GGAACAACAGATTTGCCTCAGGAAGTATCCATTTGGGGTGTGCCACTATTGAAAGATGAT
AGGAGTGATGTTATTCTGCTTAAGTTTCTTAGAGCTAGAGATTTCAAGGTTAAGGAGTCA
TTTGCTATGTTAAAGAACACTATTTTATGGAGAAAGGAGTTTAACATTGAAGAACTAGTA
GATGAAAATCTTGGGGATGATCTTGAAAAAGTAGTGTTTATGGATGGTCATGACAAAGAG
GGACACCCTGTTTGTTATAATGTGTATGGGGAGTTTCAGAATAAGGAATTGTATAATAAA
ACATTTGGAGATGAGGAGAAGAGAAACAAGTTTTTGCGCTGGAGGATTCAGTTCTTGGAG
AGGAGTATAAGGAAGCTGGATTTCAGTCCTGGTGGAATCAATACTATATTTCAAGTCAGT
GACCTCAAGAACTCACCTGGTCCAGGGAAAAGGGAACTTCGAATTGCTACTAGGCAGGCC
TTGCAATTGCTTCAGGATAATTATCCGGAATTCGTTGCTAAGCAGGTGTTTATCAACGTC
CCTTGGTGGTATTTAGCTTTCTACACAATGATCAGCCCATTCATGACGCAGAGAACAAAA
AGCAAGTTTGTATTTGCTGGTCCATCAAAGACTGCAGAAACTCTTTACAAGTATATAACT
CCTGAGCAAGTACCTGTTCAATATGGGGGCCTCAGCGTCGATTACTGTGAATGCAATCCC
GAGTTCACTTCCAATGATCCAGTCACAGAGATCATTGTTAAACCTGCAACAAAGCAAACC
GTGGAGATCATTGTAAATGAGAAGTGCATTATTGTCTGGGAGCTACGCGTATTGGGTTGG
GAGGTGACATATAGTGCTGAATATGTGCCGAATACAGATAGTGGATACACTGTGAACATA
CAGAAGCCTAGGAAGATGACCACAGCTGATGAACCTGTTGTTAGCAGCAGCTTCAAGATT
GTCGAGCTAGGTAAGATACTGTTGACGATTGACAACCCAACTTCAAAGAAGAAGAAACTT
CTGTACAGGTTCAAGGATAAGCCCTATTCTGATTGA