Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400065835
CDS Infomation

pacid=37438962 polypeptide=PGSC0003DMP400044406 locus=PGSC0003DMG401025624 ID=PGSC0003DMT400065835.v4.03 annot-version=v4.03
Sequence

ATGAATATTGGTAGTGGGTCTGTTCTCAGTTCTACTGGTTCTTGGAAGTCCGGTGATGTG
GTTTCCGATCAGTTTCCGGTGGGACTCCGGGTACTTGTAGTTGATGATGACCCTACTTGT
TTAAAGATCTTGGAGAAGATGCTCAGGAACTGTCACTATGAAGTCACCAAGTGTAATAGG
GCTGAGGTTGCACTATCATATCTCCGGGAAAATAAGAATGGTTTTGACATTGTTATAAGT
GATGTACACATGCCAGACATGGATGGTTTCAAACTTCTTGAGCACATTGGTCTGGAGATG
GACTTGCCTGTTATAATGATGTCTGCTGATGATAGTAAGGATGTGGTTATGAAAGGAGTT
ACTCATGGTGCGTATGATTATTTGATCAAACCGGTGCGGATTGAGGCACTTAAGAATATT
TGGCAACATGTTGTTCGTAAAAGGAAACAGGAGTGGAGGGACAATAATTTTGATCAATCA
GGAAGTGTGGAAGAGGGAGATCGACAGCAGAAACAATCGGAGGATGTTGATTACTCATCT
TCAGCTAATGAAGGAAACTGGAAAAACTCCAAGAAAAGAAAGGAAGAGGATGAAGAAGGT
GAAGAAAGGGATGATACATCCTCACAAAAGAAGCCACGTGTCGTTTGGTCTGTGGAGCTT
CATCAACAATTTGTACAAGCTGTGCATCAACTTGGAATTGACAAGGCTGTTCCGAAGAAA
ATCTTGGAACTGATGAATGTTCCTGGACTAACCAGAGAAAATGTTGCTAGCCACCTTCAG
AAATATCGGTTGTATCTTAGAAGGTTGAGTTGTGTATCGCAGCACCAGAATGGACTGAAC
AACTCTTTCATGGGACGCCCAGATGCAACCTTCGGAACAATATCTTCCCTCAATGGGCTT
GATCTTCAAGCTATTGCTGCTGCTGGTCAAATCCCTGCACAAAGTCTTGCTACCCTCCAA
GCAGCTGCCCTTGGTAGATCTGCTACAAAATCTGCCATATCTATTCCCCTAGTAGATCAA
AGAAACCTTTTCAGCTTCGAAAATTCCCAGGTGAGATTTCCAGAAGGGCAACAACAACTG
AATAATAGCAATAAGCAAATCGACTTGCTGCATGGAATTCCAACCACCATGGAACCAAAG
CAGCTTGCAAATTTGCACCACCCTTCCCAGACCTTTGTGGGTATGAATATGCAAGTAAAC
TCCATGGCACAACATAACAATTCTGTGGTTATGCGAATGCCCCAATCACAACCTACGGCT
CAAATGCTATGTGGAGCTAATAATGGCAGTCAAGCTTCGAGGCTTCCATTGTCCATGCAG
CAATCTTTGTCATCAGAAGGGATACCTGGTGCGGTCCTAGCACGGTGTCGTATTGTTGAC
AATGCACGAGCGAGTGTTTACAATCCAGTCTCCCAAGCATCTTCAATGGTAGATTTCTCA
GTAAATCAAAGCAAGGAGTTGCAAAACTACAACTTTTCTCTTGGGAGTAATAGTTCAGGG
ATGTCCACTTTGACTAATCGAGGGATGCTTCAGGAAGAGGCGAATTCTGATATCAAAGGA
TCTAGAGGTTTCCCTACTAATTATGATATTTTCAACGACCTCCATCAGCCAAAATTGCAG
AACTGGGGTTTACAGAATGTTGGTTCATCCTTTGACTCATCTCATCACCCAAGTATACAA
GGAACTCAGGGTCTCTCATCACAATTGTTACTGCAACAGGGGATTTCTTCAACACACAAC
AATGGACAAAATAGAAATGGTCCTATTGGGAAACCAATGTACACCAATGGTGAAGAAAGT
GGACATACTAATCTTATGGGTGGACAACAACTTAACTCTGTCAGTAGGAATATGCTTGCT
GTTAAAGCTGAAAGATTTCCCGACGCAGACTATCAGAGTACCAATTTCCCGGAGCAATTT
GGACAGGATGACCTCATGAGTGCCTTCCTAAAACAGCAAGGAAGTGTTGGACCAGTTGAA
ACTGAATTTGGCTTCGATGGATACACATTGGATAATCTTCCAGTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400044406
PEP Infomation

pacid=37438962 transcript=PGSC0003DMT400065835 locus=PGSC0003DMG401025624 ID=PGSC0003DMT400065835.v4.03 annot-version=v4.03
Sequence

MNIGSGSVLSSTGSWKSGDVVSDQFPVGLRVLVVDDDPTCLKILEKMLRNCHYEVTKCNR
AEVALSYLRENKNGFDIVISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDSKDVVMKGV
THGAYDYLIKPVRIEALKNIWQHVVRKRKQEWRDNNFDQSGSVEEGDRQQKQSEDVDYSS
SANEGNWKNSKKRKEEDEEGEERDDTSSQKKPRVVWSVELHQQFVQAVHQLGIDKAVPKK
ILELMNVPGLTRENVASHLQKYRLYLRRLSCVSQHQNGLNNSFMGRPDATFGTISSLNGL
DLQAIAAAGQIPAQSLATLQAAALGRSATKSAISIPLVDQRNLFSFENSQVRFPEGQQQL
NNSNKQIDLLHGIPTTMEPKQLANLHHPSQTFVGMNMQVNSMAQHNNSVVMRMPQSQPTA
QMLCGANNGSQASRLPLSMQQSLSSEGIPGAVLARCRIVDNARASVYNPVSQASSMVDFS
VNQSKELQNYNFSLGSNSSGMSTLTNRGMLQEEANSDIKGSRGFPTNYDIFNDLHQPKLQ
NWGLQNVGSSFDSSHHPSIQGTQGLSSQLLLQQGISSTHNNGQNRNGPIGKPMYTNGEES
GHTNLMGGQQLNSVSRNMLAVKAERFPDADYQSTNFPEQFGQDDLMSAFLKQQGSVGPVE
TEFGFDGYTLDNLPV*

Transcript Sequence

Transcript ID

PGSC0003DMT400065835
Transcript Infomation

pacid=37438962 locus=PGSC0003DMG401025624 ID=PGSC0003DMT400065835.v4.03 annot-version=v4.03
Sequence

ATGAATATTGGTAGTGGGTCTGTTCTCAGTTCTACTGGTTCTTGGAAGTCCGGTGATGTG
GTTTCCGATCAGTTTCCGGTGGGACTCCGGGTACTTGTAGTTGATGATGACCCTACTTGT
TTAAAGATCTTGGAGAAGATGCTCAGGAACTGTCACTATGAAGTCACCAAGTGTAATAGG
GCTGAGGTTGCACTATCATATCTCCGGGAAAATAAGAATGGTTTTGACATTGTTATAAGT
GATGTACACATGCCAGACATGGATGGTTTCAAACTTCTTGAGCACATTGGTCTGGAGATG
GACTTGCCTGTTATAATGATGTCTGCTGATGATAGTAAGGATGTGGTTATGAAAGGAGTT
ACTCATGGTGCGTATGATTATTTGATCAAACCGGTGCGGATTGAGGCACTTAAGAATATT
TGGCAACATGTTGTTCGTAAAAGGAAACAGGAGTGGAGGGACAATAATTTTGATCAATCA
GGAAGTGTGGAAGAGGGAGATCGACAGCAGAAACAATCGGAGGATGTTGATTACTCATCT
TCAGCTAATGAAGGAAACTGGAAAAACTCCAAGAAAAGAAAGGAAGAGGATGAAGAAGGT
GAAGAAAGGGATGATACATCCTCACAAAAGAAGCCACGTGTCGTTTGGTCTGTGGAGCTT
CATCAACAATTTGTACAAGCTGTGCATCAACTTGGAATTGACAAGGCTGTTCCGAAGAAA
ATCTTGGAACTGATGAATGTTCCTGGACTAACCAGAGAAAATGTTGCTAGCCACCTTCAG
AAATATCGGTTGTATCTTAGAAGGTTGAGTTGTGTATCGCAGCACCAGAATGGACTGAAC
AACTCTTTCATGGGACGCCCAGATGCAACCTTCGGAACAATATCTTCCCTCAATGGGCTT
GATCTTCAAGCTATTGCTGCTGCTGGTCAAATCCCTGCACAAAGTCTTGCTACCCTCCAA
GCAGCTGCCCTTGGTAGATCTGCTACAAAATCTGCCATATCTATTCCCCTAGTAGATCAA
AGAAACCTTTTCAGCTTCGAAAATTCCCAGGTGAGATTTCCAGAAGGGCAACAACAACTG
AATAATAGCAATAAGCAAATCGACTTGCTGCATGGAATTCCAACCACCATGGAACCAAAG
CAGCTTGCAAATTTGCACCACCCTTCCCAGACCTTTGTGGGTATGAATATGCAAGTAAAC
TCCATGGCACAACATAACAATTCTGTGGTTATGCGAATGCCCCAATCACAACCTACGGCT
CAAATGCTATGTGGAGCTAATAATGGCAGTCAAGCTTCGAGGCTTCCATTGTCCATGCAG
CAATCTTTGTCATCAGAAGGGATACCTGGTGCGGTCCTAGCACGGTGTCGTATTGTTGAC
AATGCACGAGCGAGTGTTTACAATCCAGTCTCCCAAGCATCTTCAATGGTAGATTTCTCA
GTAAATCAAAGCAAGGAGTTGCAAAACTACAACTTTTCTCTTGGGAGTAATAGTTCAGGG
ATGTCCACTTTGACTAATCGAGGGATGCTTCAGGAAGAGGCGAATTCTGATATCAAAGGA
TCTAGAGGTTTCCCTACTAATTATGATATTTTCAACGACCTCCATCAGCCAAAATTGCAG
AACTGGGGTTTACAGAATGTTGGTTCATCCTTTGACTCATCTCATCACCCAAGTATACAA
GGAACTCAGGGTCTCTCATCACAATTGTTACTGCAACAGGGGATTTCTTCAACACACAAC
AATGGACAAAATAGAAATGGTCCTATTGGGAAACCAATGTACACCAATGGTGAAGAAAGT
GGACATACTAATCTTATGGGTGGACAACAACTTAACTCTGTCAGTAGGAATATGCTTGCT
GTTAAAGCTGAAAGATTTCCCGACGCAGACTATCAGAGTACCAATTTCCCGGAGCAATTT
GGACAGGATGACCTCATGAGTGCCTTCCTAAAACAGCAAGGAAGTGTTGGACCAGTTGAA
ACTGAATTTGGCTTCGATGGATACACATTGGATAATCTTCCAGTTTAA