Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400065820
CDS Infomation

pacid=37446475 polypeptide=PGSC0003DMP400044395 locus=PGSC0003DMG400025620 ID=PGSC0003DMT400065820.v4.03 annot-version=v4.03
Sequence

ATGGGGACGAAGAACAATGATGGTGAAAAACCAAAGGAAGGATCAAAGTCAGGTAGGAGT
AGTAATGGCTTCATTCCGACGTCGTTTCGAGTTCTTTCTAGGATTGTATCCTCTGGTGCT
TCGACTGTTTCTTCAACTGTTAGGTCAGCTGCTTCGGCTATTGTGGACAGGGACAATGAG
CATGATCAGGTTCTGTGGGCTGGATTTGACAAGCTGGAATGTGAGGGAGGCACTTCTCGT
CAAATTTTGCTCTTGGGTTGTCAGTATGGTTTCCAGATTTGGGATGTTGAAGATTCTGAT
AATATACGCAACTTAGTTTCCAGGTCAGATGGTCCTGTTCCTTTCATGCATATATTACCA
AAACCAATAGCATCAAAGAAGCACGAGGACAAATTTTCTGATAGTCACCCAGTTTTAATA
CTTTGTACTGATGGGTGTTTTTCTGGAGGTAGTAACATTCGGGAGGGCATAGGGAAACTT
CATGATGTAACCATCCAACAACATCATGACCAAGAGAGTACCAGTTTTGATCCCACTATT
GTTTGGTTTTATTCCTTGACATGTTACTCTTATGTGCATCAGTTGAAGTTCAGATCAGTT
GTTCATTTGGTTAGATGTAGCTCCCGTGTGATTGCCATTTTACAAGCAACTCAGATACAC
TGCTTTGATGCTGCAACTCTAGATAAGGAATATACTGTTGTTACCAATCCTGTCATCACG
GGTTTTTCAGGGTTCGGTAGTACAGGTGTGGGACCTCTTGCATTGGGTCCCAGGTGGATG
GCCTATAGTGGAAGTCCAGTTTCAATTTCAAATTCTGGTCACATCAATCCACAGCACCTT
ACTCCTTCAGCTAGTTTCCCCAGTCTGGCTCCAAATGGCAGCTTAATCGCTCATTATGCA
AAGGAATCCAGCAAGCGACTTGCAGCTGGTATTGTGACTCTAGGGGACATCGGGTATAAG
AAGCTCGCTAGGTACTATTCTGATCTGTCACCAGATAGTAATTGTTCTCAATCTGGGACT
GCTTGTGGAAAGATATCAGGAACTGCTAATGGTCATCTCCCAGGTGCAGACAATGTCGGA
ATGGTCATAGTCAGGGACATTGTCAGCAAAGCTCTTATTGCTCAGTTTAGGGCACATAAG
AGTCCTATTTCAGCTCTATGCTTTGATCCTAGCAGTACTCGATTGGTGACAGCTTCAGTT
CAGGGTCATAATATCAATGTATTCCAGATAATGCCTATACTATCTGAAAATAAATCGCCT
AATCCTGGTTCATCTTATCTCCATCTTTACAGGCTGCAGCGTGGACTGACTAATGCGGTT
ATACAGGATATAAGTTTTAGTGGTGATAGCCAGTGGATTATGATAACTTCTTCCAGAGGG
ACTAGCCATCTATTTACAATTCCTTCTTCAGGGACAGTTAATTTTCAATCTTCAGATGCA
TTTCTTACTGGTAGGAGTAATGGCTCTAGTGTCTTGGAAAAACCTGCAGTTCATTGCACC
TCGAATTCAAAAATTCCGGTGCTTAATCAACATAACATCTGTGAATCTGGTCCTCCGGTG
ACTCTTTCTGCTGTTGGTCGAATAAGGAGTGGAGGTAATGGTTGGAGAAATACTGTAACC
GGTGCTGCAGCTGCTGCAACTGGAAGGACAATTTCTTTTTCTGGGTCCATTGCTTCAGCT
TTTCACCACTGCAATAGTACTAGACAATGTGCAGATTCAGGCCTTCTAAAAGCAAATCAT
CGCCTGCTTGTTTTTTCATCTCCGGGCTGTATGACGCAGTATGCATTGCGTATGTGTTCT
GAGCTAGATTCTGTTGCAACCGTTCCTGCTATGGGTTCAACTTACGAGGCAGATCTTGAA
ACAAAATTAGTGGTAGAGGCAATCCAAAAGTGGAATATTTTCCAGAAACAAAATTACAAA
GAACGAGATGATAATGCTGATATATATGGTGAATTTGGCTGTTCTGATAGCAGTAAAGTC
TTTCCTGAAGGAATAACCAAGGGAAACAGTCTCTCTTCCGAGACTAGGAATACATTTACT
AAAGAAAAGATAAGATCTGAGATAGGACATCATATATACATATCCGAAGCAGAACTCCAA
ATGCATAGACCTCATAATCAAGTGTGGGCAAAACCTGAGGTATTTTTTCGATCATTTGTT
ATGGATAGGATTCACTTAGATGACGAAGGTGGTGGAGAGGCTGAGATTGAAGTAATACCA
ACTCATATTGTTGAGGCAAGGTCAAAACATTTATTTCCAGTTTATTGTCACCACCTTCAA
GCTTCCAAGAGCGGAAAAGCAAGCCAACAGTTACGTCCAAGTCCAGAGGTCTCTGAAAGC
AATAAGCTCAAGTTAAATAGTGGTTGTGAGTGCTCTTCCCTTTCCATGGATGAATCCAGC
ATTGAACTTCACCATGGCAGAGAAACCGTGAGGGATAGTGTTGGAGCGATATGCCAAACG
GCTAGTGCCTTTGTAAATAGTAGTGACAACAGTAGCATAGATTATGTAAATGATATAAGA
AGCACCATGGAGACTACACAATCTAAGTTTGTAAATACTAACCTAGGTGTTACAAAAACT
GTCACTCATTTAGAAGATGAAGCAGGTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400044395
PEP Infomation

pacid=37446475 transcript=PGSC0003DMT400065820 locus=PGSC0003DMG400025620 ID=PGSC0003DMT400065820.v4.03 annot-version=v4.03
Sequence

MGTKNNDGEKPKEGSKSGRSSNGFIPTSFRVLSRIVSSGASTVSSTVRSAASAIVDRDNE
HDQVLWAGFDKLECEGGTSRQILLLGCQYGFQIWDVEDSDNIRNLVSRSDGPVPFMHILP
KPIASKKHEDKFSDSHPVLILCTDGCFSGGSNIREGIGKLHDVTIQQHHDQESTSFDPTI
VWFYSLTCYSYVHQLKFRSVVHLVRCSSRVIAILQATQIHCFDAATLDKEYTVVTNPVIT
GFSGFGSTGVGPLALGPRWMAYSGSPVSISNSGHINPQHLTPSASFPSLAPNGSLIAHYA
KESSKRLAAGIVTLGDIGYKKLARYYSDLSPDSNCSQSGTACGKISGTANGHLPGADNVG
MVIVRDIVSKALIAQFRAHKSPISALCFDPSSTRLVTASVQGHNINVFQIMPILSENKSP
NPGSSYLHLYRLQRGLTNAVIQDISFSGDSQWIMITSSRGTSHLFTIPSSGTVNFQSSDA
FLTGRSNGSSVLEKPAVHCTSNSKIPVLNQHNICESGPPVTLSAVGRIRSGGNGWRNTVT
GAAAAATGRTISFSGSIASAFHHCNSTRQCADSGLLKANHRLLVFSSPGCMTQYALRMCS
ELDSVATVPAMGSTYEADLETKLVVEAIQKWNIFQKQNYKERDDNADIYGEFGCSDSSKV
FPEGITKGNSLSSETRNTFTKEKIRSEIGHHIYISEAELQMHRPHNQVWAKPEVFFRSFV
MDRIHLDDEGGGEAEIEVIPTHIVEARSKHLFPVYCHHLQASKSGKASQQLRPSPEVSES
NKLKLNSGCECSSLSMDESSIELHHGRETVRDSVGAICQTASAFVNSSDNSSIDYVNDIR
STMETTQSKFVNTNLGVTKTVTHLEDEAG*

Transcript Sequence

Transcript ID

PGSC0003DMT400065820
Transcript Infomation

pacid=37446475 locus=PGSC0003DMG400025620 ID=PGSC0003DMT400065820.v4.03 annot-version=v4.03
Sequence

ATGGGGACGAAGAACAATGATGGTGAAAAACCAAAGGAAGGATCAAAGTCAGGTAGGAGT
AGTAATGGCTTCATTCCGACGTCGTTTCGAGTTCTTTCTAGGATTGTATCCTCTGGTGCT
TCGACTGTTTCTTCAACTGTTAGGTCAGCTGCTTCGGCTATTGTGGACAGGGACAATGAG
CATGATCAGGTTCTGTGGGCTGGATTTGACAAGCTGGAATGTGAGGGAGGCACTTCTCGT
CAAATTTTGCTCTTGGGTTGTCAGTATGGTTTCCAGATTTGGGATGTTGAAGATTCTGAT
AATATACGCAACTTAGTTTCCAGGTCAGATGGTCCTGTTCCTTTCATGCATATATTACCA
AAACCAATAGCATCAAAGAAGCACGAGGACAAATTTTCTGATAGTCACCCAGTTTTAATA
CTTTGTACTGATGGGTGTTTTTCTGGAGGTAGTAACATTCGGGAGGGCATAGGGAAACTT
CATGATGTAACCATCCAACAACATCATGACCAAGAGAGTACCAGTTTTGATCCCACTATT
GTTTGGTTTTATTCCTTGACATGTTACTCTTATGTGCATCAGTTGAAGTTCAGATCAGTT
GTTCATTTGGTTAGATGTAGCTCCCGTGTGATTGCCATTTTACAAGCAACTCAGATACAC
TGCTTTGATGCTGCAACTCTAGATAAGGAATATACTGTTGTTACCAATCCTGTCATCACG
GGTTTTTCAGGGTTCGGTAGTACAGGTGTGGGACCTCTTGCATTGGGTCCCAGGTGGATG
GCCTATAGTGGAAGTCCAGTTTCAATTTCAAATTCTGGTCACATCAATCCACAGCACCTT
ACTCCTTCAGCTAGTTTCCCCAGTCTGGCTCCAAATGGCAGCTTAATCGCTCATTATGCA
AAGGAATCCAGCAAGCGACTTGCAGCTGGTATTGTGACTCTAGGGGACATCGGGTATAAG
AAGCTCGCTAGGTACTATTCTGATCTGTCACCAGATAGTAATTGTTCTCAATCTGGGACT
GCTTGTGGAAAGATATCAGGAACTGCTAATGGTCATCTCCCAGGTGCAGACAATGTCGGA
ATGGTCATAGTCAGGGACATTGTCAGCAAAGCTCTTATTGCTCAGTTTAGGGCACATAAG
AGTCCTATTTCAGCTCTATGCTTTGATCCTAGCAGTACTCGATTGGTGACAGCTTCAGTT
CAGGGTCATAATATCAATGTATTCCAGATAATGCCTATACTATCTGAAAATAAATCGCCT
AATCCTGGTTCATCTTATCTCCATCTTTACAGGCTGCAGCGTGGACTGACTAATGCGGTT
ATACAGGATATAAGTTTTAGTGGTGATAGCCAGTGGATTATGATAACTTCTTCCAGAGGG
ACTAGCCATCTATTTACAATTCCTTCTTCAGGGACAGTTAATTTTCAATCTTCAGATGCA
TTTCTTACTGGTAGGAGTAATGGCTCTAGTGTCTTGGAAAAACCTGCAGTTCATTGCACC
TCGAATTCAAAAATTCCGGTGCTTAATCAACATAACATCTGTGAATCTGGTCCTCCGGTG
ACTCTTTCTGCTGTTGGTCGAATAAGGAGTGGAGGTAATGGTTGGAGAAATACTGTAACC
GGTGCTGCAGCTGCTGCAACTGGAAGGACAATTTCTTTTTCTGGGTCCATTGCTTCAGCT
TTTCACCACTGCAATAGTACTAGACAATGTGCAGATTCAGGCCTTCTAAAAGCAAATCAT
CGCCTGCTTGTTTTTTCATCTCCGGGCTGTATGACGCAGTATGCATTGCGTATGTGTTCT
GAGCTAGATTCTGTTGCAACCGTTCCTGCTATGGGTTCAACTTACGAGGCAGATCTTGAA
ACAAAATTAGTGGTAGAGGCAATCCAAAAGTGGAATATTTTCCAGAAACAAAATTACAAA
GAACGAGATGATAATGCTGATATATATGGTGAATTTGGCTGTTCTGATAGCAGTAAAGTC
TTTCCTGAAGGAATAACCAAGGGAAACAGTCTCTCTTCCGAGACTAGGAATACATTTACT
AAAGAAAAGATAAGATCTGAGATAGGACATCATATATACATATCCGAAGCAGAACTCCAA
ATGCATAGACCTCATAATCAAGTGTGGGCAAAACCTGAGGTATTTTTTCGATCATTTGTT
ATGGATAGGATTCACTTAGATGACGAAGGTGGTGGAGAGGCTGAGATTGAAGTAATACCA
ACTCATATTGTTGAGGCAAGGTCAAAACATTTATTTCCAGTTTATTGTCACCACCTTCAA
GCTTCCAAGAGCGGAAAAGCAAGCCAACAGTTACGTCCAAGTCCAGAGGTCTCTGAAAGC
AATAAGCTCAAGTTAAATAGTGGTTGTGAGTGCTCTTCCCTTTCCATGGATGAATCCAGC
ATTGAACTTCACCATGGCAGAGAAACCGTGAGGGATAGTGTTGGAGCGATATGCCAAACG
GCTAGTGCCTTTGTAAATAGTAGTGACAACAGTAGCATAGATTATGTAAATGATATAAGA
AGCACCATGGAGACTACACAATCTAAGTTTGTAAATACTAACCTAGGTGTTACAAAAACT
GTCACTCATTTAGAAGATGAAGCAGGTTAG