Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400065572
CDS Infomation

pacid=37451079 polypeptide=PGSC0003DMP400044245 locus=PGSC0003DMG400025509 ID=PGSC0003DMT400065572.v4.03 annot-version=v4.03
Sequence

ATGAAGAAGCTAAAAAAATCAGAAATGCTTCGTAGAGGACAGGTTGAGCATGTGAAAGCT
GAAAGGAATCTTCTTGCGGAGGTGGACAGTGATTGCATTGTCAAACTGTATTATTCTTTC
CAAGATGACGATTATCTGTATCTTGTTATGGAATATCTACCCGGTGGGGATATGATGACA
CTACTCATGAGGAAGGATATATTGACTGAAGACGAAGCCAGATTTTATGTTGCAGAAACG
GTTTTAGCAATTGAATCTATCCATAAACATAACTATATACACAGAGACATTAAGCCTGAT
AACCTGCTACTCGATAGATATGGTCATTTAAAACTATCAGATTTTGGACTATGTAAGCCT
TTAGACTGCAGTACTCTTGAAGAGAAGGATTTCTCAGTGGGGGATAGTGCCAATGGAGGT
TCCAAGAGTGAAAGCCCTACGGCTCCCAAACGCACTCAGCAAGAGCAGCTAGAAAACTGG
CAGAAAAATAGGAGGATGCTTGCCTATTCTACAGTGGGTACACCAGACTATATTGCTCCG
GAGGTCCTGCAGAAGAAAGGTTATGGAATGGAATGTGACTGGTGGTCGCTTGGCGCTATT
ATGTATGAAATGCTCATCGGTTATCCGCCTTTCTATTCTGATGATCCCATGTCAACTTGT
AGGAAGATAGTTAACTGGAAAAATCATTTAAAGTTTCCTGAAGAAGTAAAGCTATCTCGA
GAAGCGAAAGATATTACAAGCAAACTTCTTTGCAATGTCACTGAGAGACTTGGTTCCAAC
GGCACAGATGAAATAAAGGCCCACCCGTGGTTTAAAGGGATAGAGTGGGATAAAATCTAT
CAGATGGAAGCTGCTTTCATTCCTGAAGTCAATGATGAATTGGACACCCAAAATTTTGAA
AAGTTTGAAGAGTCTGAATCTCATTCTCAGAGTACGTCAAGATCTGGTCCGTGGAGAAAG
ATGCTCTCATCTAAGGACATTAACTTTGTCGGGTACACGTACAAGAATTTCAAAGTCGTG
AATGATTGTCAAGTGCCTGGAATGGGTACTTTCTTCGTCTCTTCCTCTCCGTATGCATGT
CCAATTAATCATGCTCCTCTAATAACATCTGAAAAATATCAAGCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400044245
PEP Infomation

pacid=37451079 transcript=PGSC0003DMT400065572 locus=PGSC0003DMG400025509 ID=PGSC0003DMT400065572.v4.03 annot-version=v4.03
Sequence

MKKLKKSEMLRRGQVEHVKAERNLLAEVDSDCIVKLYYSFQDDDYLYLVMEYLPGGDMMT
LLMRKDILTEDEARFYVAETVLAIESIHKHNYIHRDIKPDNLLLDRYGHLKLSDFGLCKP
LDCSTLEEKDFSVGDSANGGSKSESPTAPKRTQQEQLENWQKNRRMLAYSTVGTPDYIAP
EVLQKKGYGMECDWWSLGAIMYEMLIGYPPFYSDDPMSTCRKIVNWKNHLKFPEEVKLSR
EAKDITSKLLCNVTERLGSNGTDEIKAHPWFKGIEWDKIYQMEAAFIPEVNDELDTQNFE
KFEESESHSQSTSRSGPWRKMLSSKDINFVGYTYKNFKVVNDCQVPGMGTFFVSSSPYAC
PINHAPLITSEKYQA*

Transcript Sequence

Transcript ID

PGSC0003DMT400065572
Transcript Infomation

pacid=37451079 locus=PGSC0003DMG400025509 ID=PGSC0003DMT400065572.v4.03 annot-version=v4.03
Sequence

ATGAAGAAGCTAAAAAAATCAGAAATGCTTCGTAGAGGACAGGTTGAGCATGTGAAAGCT
GAAAGGAATCTTCTTGCGGAGGTGGACAGTGATTGCATTGTCAAACTGTATTATTCTTTC
CAAGATGACGATTATCTGTATCTTGTTATGGAATATCTACCCGGTGGGGATATGATGACA
CTACTCATGAGGAAGGATATATTGACTGAAGACGAAGCCAGATTTTATGTTGCAGAAACG
GTTTTAGCAATTGAATCTATCCATAAACATAACTATATACACAGAGACATTAAGCCTGAT
AACCTGCTACTCGATAGATATGGTCATTTAAAACTATCAGATTTTGGACTATGTAAGCCT
TTAGACTGCAGTACTCTTGAAGAGAAGGATTTCTCAGTGGGGGATAGTGCCAATGGAGGT
TCCAAGAGTGAAAGCCCTACGGCTCCCAAACGCACTCAGCAAGAGCAGCTAGAAAACTGG
CAGAAAAATAGGAGGATGCTTGCCTATTCTACAGTGGGTACACCAGACTATATTGCTCCG
GAGGTCCTGCAGAAGAAAGGTTATGGAATGGAATGTGACTGGTGGTCGCTTGGCGCTATT
ATGTATGAAATGCTCATCGGTTATCCGCCTTTCTATTCTGATGATCCCATGTCAACTTGT
AGGAAGATAGTTAACTGGAAAAATCATTTAAAGTTTCCTGAAGAAGTAAAGCTATCTCGA
GAAGCGAAAGATATTACAAGCAAACTTCTTTGCAATGTCACTGAGAGACTTGGTTCCAAC
GGCACAGATGAAATAAAGGCCCACCCGTGGTTTAAAGGGATAGAGTGGGATAAAATCTAT
CAGATGGAAGCTGCTTTCATTCCTGAAGTCAATGATGAATTGGACACCCAAAATTTTGAA
AAGTTTGAAGAGTCTGAATCTCATTCTCAGAGTACGTCAAGATCTGGTCCGTGGAGAAAG
ATGCTCTCATCTAAGGACATTAACTTTGTCGGGTACACGTACAAGAATTTCAAAGTCGTG
AATGATTGTCAAGTGCCTGGAATGGGTACTTTCTTCGTCTCTTCCTCTCCGTATGCATGT
CCAATTAATCATGCTCCTCTAATAACATCTGAAAAATATCAAGCTTAA