Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400065549
CDS Infomation

pacid=37453428 polypeptide=PGSC0003DMP400044225 locus=PGSC0003DMG400025502 ID=PGSC0003DMT400065549.v4.03 annot-version=v4.03
Sequence

ATGGTGTCTCAGCAAGAAGCTGTTTTTGCATCTGCATCCTCTGATGGCACTGTGAATGTA
TGGGAAGTAGTATTTCCATCTACTCGTGGAGGTGATTGCAAATTGTCATGCTCGGATTCT
CTGTTTGTTGGTCAGAAACCTATGGTTGCTCTTTCACTAGCAGAGCTCCCAGGGAATAGC
AAGCAGCTGGTTCTGGCCATGGGAGGATTGGACAACAAAATTCATCTGTATTGTGGTGAG
AGAAATGGAAAATTTCTTCGTGCTTGTGAGTTAAAGGCTCATACAGACTGGATTAGGAGT
TTAGATCTCTCATTGCCTGTGTATGTGAATGGTGAAACTAGTCTTCTACTTGTAAGTTCA
TCTCAAGACAAAGGCATTCGCATATGGAAGATGACCTTACAGGATTCTTCAGCTAGTAAC
AAGAAGCAACAAACAAGTTTGGCTTCTTACATTAAAGGTCCTGTTCTTGTAGCTGGATCA
TCCTCTTATCAGATCTCTATGGAATCTCTCCTCATTGGGCATGAGGATTGGGTATACTCA
GTGGAATGGCAGCCGCCATCGACTTCTTCTGTTGAGGGAATTGAGTGTTTTCAGCCTCAA
AGCATTTTATCTGCATCCATGGATAAGACAATGTTGATCTGGCAACCTGAAAAGACAACT
GGTATTTGGATGAATGTAGTTACCGTTGGGGAGTTAAGTCACTGTGCTTTGGGATTTTAT
GGTGGTCACTGGAGTCCAAATGCAGATTCTATTTTAGCTCATGGATATGGTGGATCTTTT
CACCTCTGGAAAGATGTTGGTATTGAGTATGATGATTGGAAGCCACAAAAAGTTCCATCT
GGACACTTTGCTGCAGTGTCGGACATCGCCTGGGCTAGATGTGGGGAATATATGATGTCT
GTCAGTCATGATCAGTCAACTAGAGTATTTGCTCCTTGGCTCAACAATACAAGTGTAGAG
AATGAAGAATCCTGGCATGAAATTGCTCGCCCTCAAGTTCATGGTCATGACATAAATTGT
GTCACAGTAATCAAAGGAAAAGGAAATCATCGTTTTGTTGGCGGGGCAGACGAGAAAGTT
GCAAGAGTTTTTGAATCTCCTCTATCCTTTCTGAAGACGTTGAGCCATGTTACATCAGAC
AACTCTAGTTTTTCTGCCGACATTCAAGCTGATGTGCAGATATTAGGGGCAAATATGTCT
GCTCTAGGTCTATCGCAGAAACCTATTTATGTTCAGGCAGCATCGACACCAACAGACAGA
AGCAATACGGAAGGTTTTGATACTCTAGAAACTGTTCCTGAAGCAGTTCCAGTTGTCTTG
ACAGAGCCACCTATTGAAGAGCAATTGGCATGGCATACTCTATGGCCCGAATCACACAAG
CTTTATGGTCATGGGAATGAGCTTTTTTCTCTATGTTGTGATCATGATGGAAAGCTTGTA
GCTTCATCCTGCAAGGCTCAATCAGCACCAGTCGCTGAAATATGGCTTTGGCAAGTTGGT
TCTTGGAAATCCGTTGGTCGTTTACAGTCTCACAGTTTAACAGTGACCCAAATGGAGTTC
TCTCATGATAACCAGTATCTTTTGGCTGTTTCAAGAGATCGCCACTTCTCTGTTTTTCAA
ATTAATCATAAAGGAACTGATGAGATCAATTACCAGCTTGTAGCTAAGCAAGAAGCACAT
AAAAGAATAATATGGTCATGTTCTTGGAACCCATTTGGTCATGAATTTGCTACTGGTTCA
AGGGACAAGACTGTCAAAATATGGACTGTGGAAACTGAAACCTCGGTGAAGCTACTGTTG
ACACTTCCACCTTTCAAAAGCAGTGTCACTGCCCTGTCTTGGTTAGGTCTCGATAGTCAT
AGCAATCGCGGGCTTCTTGCAGTGGGAATGGAAAATGGCTTGATTGAACTATGGAATCTG
AATAGCAGAGGAGGAGATGGGCATTTATCAGTCCAAAATGCTTCTCCTGCTGTTAAGTTT
GATCCATTTCTGTGCCACGTCTCTACTGTTCAACGACTATCTTGGAGAAATCCTCAGAAG
AGCGAAGATTCTGAGACCGTGCAGCTTGCCTCCTGTGGAGCTGATCATTGTGTGAGAATA
TTCAGTGTAACTATTACCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400044225
PEP Infomation

pacid=37453428 transcript=PGSC0003DMT400065549 locus=PGSC0003DMG400025502 ID=PGSC0003DMT400065549.v4.03 annot-version=v4.03
Sequence

MVSQQEAVFASASSDGTVNVWEVVFPSTRGGDCKLSCSDSLFVGQKPMVALSLAELPGNS
KQLVLAMGGLDNKIHLYCGERNGKFLRACELKAHTDWIRSLDLSLPVYVNGETSLLLVSS
SQDKGIRIWKMTLQDSSASNKKQQTSLASYIKGPVLVAGSSSYQISMESLLIGHEDWVYS
VEWQPPSTSSVEGIECFQPQSILSASMDKTMLIWQPEKTTGIWMNVVTVGELSHCALGFY
GGHWSPNADSILAHGYGGSFHLWKDVGIEYDDWKPQKVPSGHFAAVSDIAWARCGEYMMS
VSHDQSTRVFAPWLNNTSVENEESWHEIARPQVHGHDINCVTVIKGKGNHRFVGGADEKV
ARVFESPLSFLKTLSHVTSDNSSFSADIQADVQILGANMSALGLSQKPIYVQAASTPTDR
SNTEGFDTLETVPEAVPVVLTEPPIEEQLAWHTLWPESHKLYGHGNELFSLCCDHDGKLV
ASSCKAQSAPVAEIWLWQVGSWKSVGRLQSHSLTVTQMEFSHDNQYLLAVSRDRHFSVFQ
INHKGTDEINYQLVAKQEAHKRIIWSCSWNPFGHEFATGSRDKTVKIWTVETETSVKLLL
TLPPFKSSVTALSWLGLDSHSNRGLLAVGMENGLIELWNLNSRGGDGHLSVQNASPAVKF
DPFLCHVSTVQRLSWRNPQKSEDSETVQLASCGADHCVRIFSVTIT*

Transcript Sequence

Transcript ID

PGSC0003DMT400065549
Transcript Infomation

pacid=37453428 locus=PGSC0003DMG400025502 ID=PGSC0003DMT400065549.v4.03 annot-version=v4.03
Sequence

ATGGTGTCTCAGCAAGAAGCTGTTTTTGCATCTGCATCCTCTGATGGCACTGTGAATGTA
TGGGAAGTAGTATTTCCATCTACTCGTGGAGGTGATTGCAAATTGTCATGCTCGGATTCT
CTGTTTGTTGGTCAGAAACCTATGGTTGCTCTTTCACTAGCAGAGCTCCCAGGGAATAGC
AAGCAGCTGGTTCTGGCCATGGGAGGATTGGACAACAAAATTCATCTGTATTGTGGTGAG
AGAAATGGAAAATTTCTTCGTGCTTGTGAGTTAAAGGCTCATACAGACTGGATTAGGAGT
TTAGATCTCTCATTGCCTGTGTATGTGAATGGTGAAACTAGTCTTCTACTTGTAAGTTCA
TCTCAAGACAAAGGCATTCGCATATGGAAGATGACCTTACAGGATTCTTCAGCTAGTAAC
AAGAAGCAACAAACAAGTTTGGCTTCTTACATTAAAGGTCCTGTTCTTGTAGCTGGATCA
TCCTCTTATCAGATCTCTATGGAATCTCTCCTCATTGGGCATGAGGATTGGGTATACTCA
GTGGAATGGCAGCCGCCATCGACTTCTTCTGTTGAGGGAATTGAGTGTTTTCAGCCTCAA
AGCATTTTATCTGCATCCATGGATAAGACAATGTTGATCTGGCAACCTGAAAAGACAACT
GGTATTTGGATGAATGTAGTTACCGTTGGGGAGTTAAGTCACTGTGCTTTGGGATTTTAT
GGTGGTCACTGGAGTCCAAATGCAGATTCTATTTTAGCTCATGGATATGGTGGATCTTTT
CACCTCTGGAAAGATGTTGGTATTGAGTATGATGATTGGAAGCCACAAAAAGTTCCATCT
GGACACTTTGCTGCAGTGTCGGACATCGCCTGGGCTAGATGTGGGGAATATATGATGTCT
GTCAGTCATGATCAGTCAACTAGAGTATTTGCTCCTTGGCTCAACAATACAAGTGTAGAG
AATGAAGAATCCTGGCATGAAATTGCTCGCCCTCAAGTTCATGGTCATGACATAAATTGT
GTCACAGTAATCAAAGGAAAAGGAAATCATCGTTTTGTTGGCGGGGCAGACGAGAAAGTT
GCAAGAGTTTTTGAATCTCCTCTATCCTTTCTGAAGACGTTGAGCCATGTTACATCAGAC
AACTCTAGTTTTTCTGCCGACATTCAAGCTGATGTGCAGATATTAGGGGCAAATATGTCT
GCTCTAGGTCTATCGCAGAAACCTATTTATGTTCAGGCAGCATCGACACCAACAGACAGA
AGCAATACGGAAGGTTTTGATACTCTAGAAACTGTTCCTGAAGCAGTTCCAGTTGTCTTG
ACAGAGCCACCTATTGAAGAGCAATTGGCATGGCATACTCTATGGCCCGAATCACACAAG
CTTTATGGTCATGGGAATGAGCTTTTTTCTCTATGTTGTGATCATGATGGAAAGCTTGTA
GCTTCATCCTGCAAGGCTCAATCAGCACCAGTCGCTGAAATATGGCTTTGGCAAGTTGGT
TCTTGGAAATCCGTTGGTCGTTTACAGTCTCACAGTTTAACAGTGACCCAAATGGAGTTC
TCTCATGATAACCAGTATCTTTTGGCTGTTTCAAGAGATCGCCACTTCTCTGTTTTTCAA
ATTAATCATAAAGGAACTGATGAGATCAATTACCAGCTTGTAGCTAAGCAAGAAGCACAT
AAAAGAATAATATGGTCATGTTCTTGGAACCCATTTGGTCATGAATTTGCTACTGGTTCA
AGGGACAAGACTGTCAAAATATGGACTGTGGAAACTGAAACCTCGGTGAAGCTACTGTTG
ACACTTCCACCTTTCAAAAGCAGTGTCACTGCCCTGTCTTGGTTAGGTCTCGATAGTCAT
AGCAATCGCGGGCTTCTTGCAGTGGGAATGGAAAATGGCTTGATTGAACTATGGAATCTG
AATAGCAGAGGAGGAGATGGGCATTTATCAGTCCAAAATGCTTCTCCTGCTGTTAAGTTT
GATCCATTTCTGTGCCACGTCTCTACTGTTCAACGACTATCTTGGAGAAATCCTCAGAAG
AGCGAAGATTCTGAGACCGTGCAGCTTGCCTCCTGTGGAGCTGATCATTGTGTGAGAATA
TTCAGTGTAACTATTACCTAA