Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400065517
CDS Infomation

pacid=37434263 polypeptide=PGSC0003DMP400044198 locus=PGSC0003DMG400025491 ID=PGSC0003DMT400065517.v4.03 annot-version=v4.03
Sequence

ATGTCTACTTTTGGCTTGGGTTTCTTTGTTATTTGTATTGTAGGTATATTTTTCGATGCT
AGTCATGCACAGTTACAACTCAATTTCTATGCCAAGAGTTGTCCAAAAGCAGAGAAAATT
ATTGAGGACTATGTCCACAAGCACATCCCAAAGGCACCATCTCTTGCAGCAGCCTTATTG
CGACTTCATTTCCATGATTGCTTTGTCAGGGGTTGTGATGGTTCTGTACTTCTGAATTTC
ACTTCGAGCACGAAGAATCAGACAGAAAAAGTGGCAATTCCTAATCAAACATTGAGAGGT
TTCTCATTCATAGATGGAGTGAAGAAAATAGTTGAAGCTGAATGCCCTGGAGTTGTTTCT
TGTGCTGATATTGTTACCTTAGTTGCTAGAGACTCTGTTGTGGTCACCGGAGGACCTCAC
TGGAATGTACCAACTGGTAGAAGAGATGGAAAAATATCTAATGCTTCTGAAGCATTGGCA
AATATTCCACCTCCAACTAGTAACTTGTCTAGTCTTCAGACTTCTTTTGCCAACAAGGGT
CTTGATCTAAAAGACTTGGTCCTCTTATCAGGTGCTCACACCATTGGAGTCTCTCATTGT
TCGTCATTTTCAACACGTTTGTACAATTTCACTGGTGTTTTGGGAACACAAGATCCATCT
CTAGATAGTGAATACGCATCCAATCTTAAGGGGAAAAAATGCAAATCAATCAACGACAAT
ACAACGATAGTTGAGATGGATCCTGGTAGTTTTAGGACGTTTGATCTTAGCTACTACAAA
CTTTTGCTCAAAAGGAGAGGCCTATTTCAATCTGATGCAGCCTTAACAACAAGTGCTACG
ACAAAATCGTTCATCAACCAGCTAGTTAAGGGTTCACTCGAAGAGTTCAACACCGAATTT
GCTAAGGCGATGGAGAAAATGGGAAGGATAGGAGTTAAAACTGGCTCTGCTGGTGAAATT
AGAAAGCAATGTGCATTTGTGAACAAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400044198
PEP Infomation

pacid=37434263 transcript=PGSC0003DMT400065517 locus=PGSC0003DMG400025491 ID=PGSC0003DMT400065517.v4.03 annot-version=v4.03
Sequence

MSTFGLGFFVICIVGIFFDASHAQLQLNFYAKSCPKAEKIIEDYVHKHIPKAPSLAAALL
RLHFHDCFVRGCDGSVLLNFTSSTKNQTEKVAIPNQTLRGFSFIDGVKKIVEAECPGVVS
CADIVTLVARDSVVVTGGPHWNVPTGRRDGKISNASEALANIPPPTSNLSSLQTSFANKG
LDLKDLVLLSGAHTIGVSHCSSFSTRLYNFTGVLGTQDPSLDSEYASNLKGKKCKSINDN
TTIVEMDPGSFRTFDLSYYKLLLKRRGLFQSDAALTTSATTKSFINQLVKGSLEEFNTEF
AKAMEKMGRIGVKTGSAGEIRKQCAFVNK*

Transcript Sequence

Transcript ID

PGSC0003DMT400065517
Transcript Infomation

pacid=37434263 locus=PGSC0003DMG400025491 ID=PGSC0003DMT400065517.v4.03 annot-version=v4.03
Sequence

ATGTCTACTTTTGGCTTGGGTTTCTTTGTTATTTGTATTGTAGGTATATTTTTCGATGCT
AGTCATGCACAGTTACAACTCAATTTCTATGCCAAGAGTTGTCCAAAAGCAGAGAAAATT
ATTGAGGACTATGTCCACAAGCACATCCCAAAGGCACCATCTCTTGCAGCAGCCTTATTG
CGACTTCATTTCCATGATTGCTTTGTCAGGGGTTGTGATGGTTCTGTACTTCTGAATTTC
ACTTCGAGCACGAAGAATCAGACAGAAAAAGTGGCAATTCCTAATCAAACATTGAGAGGT
TTCTCATTCATAGATGGAGTGAAGAAAATAGTTGAAGCTGAATGCCCTGGAGTTGTTTCT
TGTGCTGATATTGTTACCTTAGTTGCTAGAGACTCTGTTGTGGTCACCGGAGGACCTCAC
TGGAATGTACCAACTGGTAGAAGAGATGGAAAAATATCTAATGCTTCTGAAGCATTGGCA
AATATTCCACCTCCAACTAGTAACTTGTCTAGTCTTCAGACTTCTTTTGCCAACAAGGGT
CTTGATCTAAAAGACTTGGTCCTCTTATCAGGTGCTCACACCATTGGAGTCTCTCATTGT
TCGTCATTTTCAACACGTTTGTACAATTTCACTGGTGTTTTGGGAACACAAGATCCATCT
CTAGATAGTGAATACGCATCCAATCTTAAGGGGAAAAAATGCAAATCAATCAACGACAAT
ACAACGATAGTTGAGATGGATCCTGGTAGTTTTAGGACGTTTGATCTTAGCTACTACAAA
CTTTTGCTCAAAAGGAGAGGCCTATTTCAATCTGATGCAGCCTTAACAACAAGTGCTACG
ACAAAATCGTTCATCAACCAGCTAGTTAAGGGTTCACTCGAAGAGTTCAACACCGAATTT
GCTAAGGCGATGGAGAAAATGGGAAGGATAGGAGTTAAAACTGGCTCTGCTGGTGAAATT
AGAAAGCAATGTGCATTTGTGAACAAGTAG