Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400065513
CDS Infomation

pacid=37434735 polypeptide=PGSC0003DMP400044194 locus=PGSC0003DMG400025487 ID=PGSC0003DMT400065513.v4.03 annot-version=v4.03
Sequence

ATGGAAGAAGAGAGGAGATTTGAAGCAGAGGCAGCAGAGGTGCAAGCATGGTGGAACACA
GAGAGGTTCAGGCTAACCAAGAGGGCATATTCAGCTAGGGATGTGGTGGCACTAAGAGGA
ACTATGAGGCAAAGTTATGCATCAAATGAGTTAGCCCAGAAGCTGTGGAGGACACTCAAG
ACTCATCAAGCTAATGGGACAGCATCAAGGACTTTTGGTGCACTTGACCCTGTTCAAGTC
ACCATGATGGCTAAGCATTTGGATTCAATTTATGTCTCTGGTTGGCAGTGTTCTTCAACT
CACACAAGTACTAATGAACCAGGGCCTGATCTTGCTGATTACCCTTATGATACTGTTCCT
AACAAAGTGGAACATTTGTTTTTTGCTCAGCAGTATCATGATAGGAAGCAGAGAGAAGCA
AGAATGAGCATGAGCAGAGAGGAGAGGGCAAGAACCCCTTTTATTGATTACTTGAAACCT
ATCATTGCTGATGGTGACACTGGATTTGGTGGTGCAACTGCTACTGTTAAGCTGTGTAAG
CTTTTCGTGGAGCGCGGTGCTGCTGGTGTCCACATTGAGGATCAGTCCTCTGTTACTAAG
AAATGTGGTCATATGGCTGGTAAAGTGCTTGTTGCTGTAAGTGAACATATTAACAGGCTT
GTGGCTGCAAGATTGCAGTTTGATATCATGGGGACTGAAACGGTCCTCGTGGCTCGTACT
GATGCGGTTGCAGCCACATTGATCCAAACCAATGTGGATACAAGGGATCACCAGTTCATT
TTGGGCGTTTCCAACCCGAATCTCAAGGGCAAGGGTTTGGCTACTCTTTTGTCTGAAGCT
ATGGCTGCAGGCAAAACAGGGCCGGAACTTCAAGCCATTGAGGATAACTGGCTTGGAATG
GCTGAACTCAAGACATTTTCTCAATGTGTCACTGATGCAATCAAGAAAATGAACCTCGCG
GAGCACGAGAAGCAGAGGAGGTTGAACCAGTGGATGAATCATTCGAGCTATGAGAAATGT
CTTTCGCACGAACAAGCTAGGGAGGTTGTTGAAAGACTTGGCCTTCCTAATCTCTTTTGG
GACTGGGACTTGCCAAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGTTCAGTAGAGGCT
GCAATTGTTCGCGGATGGGCTTTCGCCGAATACTGTGATCTAGTCTGGATGGAGACATCA
AGTCCTGATATGGTGGAATGCACAAAATTTTCTGAGGGAGTTAAGTCTCTAAGGCCTGAG
CTGATGTTGGCTTACAATCTGTCTCCGTCATTCAATTGGGATGCATCAGGAATGAATGAC
AACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTAGGCTATTGCTGGCAGTTCATT
ACTTTAGCTGGTTTCCATGCTGATGCACTCATCGTCGACACGTTTGCCAAGGATTTCGCC
AAGAGGGGAATGTTGGCCTATGTGGAGAAAATACAAAGAGAGGAAAGGAGCCATGGTGTT
GACACATTGGCTCATCAGAAATGGTCTGGTGCTAATTACTATGATAGAGTTCTAAGGACT
GTCCAGGGAGGCATCACCTCTACTGCTGCTATGGGCAAAGGTATAAACATGATTTTTACA
TGTCAGTGCATAAAACTTAAACTTCAAACACGAATTATTAGTAACATTGTATTCGAAATA
TGGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400044194
PEP Infomation

pacid=37434735 transcript=PGSC0003DMT400065513 locus=PGSC0003DMG400025487 ID=PGSC0003DMT400065513.v4.03 annot-version=v4.03
Sequence

MEEERRFEAEAAEVQAWWNTERFRLTKRAYSARDVVALRGTMRQSYASNELAQKLWRTLK
THQANGTASRTFGALDPVQVTMMAKHLDSIYVSGWQCSSTHTSTNEPGPDLADYPYDTVP
NKVEHLFFAQQYHDRKQREARMSMSREERARTPFIDYLKPIIADGDTGFGGATATVKLCK
LFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAVSEHINRLVAARLQFDIMGTETVLVART
DAVAATLIQTNVDTRDHQFILGVSNPNLKGKGLATLLSEAMAAGKTGPELQAIEDNWLGM
AELKTFSQCVTDAIKKMNLAEHEKQRRLNQWMNHSSYEKCLSHEQAREVVERLGLPNLFW
DWDLPRTREGFYRFQGSVEAAIVRGWAFAEYCDLVWMETSSPDMVECTKFSEGVKSLRPE
LMLAYNLSPSFNWDASGMNDNQMMDFIPRIAKLGYCWQFITLAGFHADALIVDTFAKDFA
KRGMLAYVEKIQREERSHGVDTLAHQKWSGANYYDRVLRTVQGGITSTAAMGKGINMIFT
CQCIKLKLQTRIISNIVFEIW*

Transcript Sequence

Transcript ID

PGSC0003DMT400065513
Transcript Infomation

pacid=37434735 locus=PGSC0003DMG400025487 ID=PGSC0003DMT400065513.v4.03 annot-version=v4.03
Sequence

ATGGAAGAAGAGAGGAGATTTGAAGCAGAGGCAGCAGAGGTGCAAGCATGGTGGAACACA
GAGAGGTTCAGGCTAACCAAGAGGGCATATTCAGCTAGGGATGTGGTGGCACTAAGAGGA
ACTATGAGGCAAAGTTATGCATCAAATGAGTTAGCCCAGAAGCTGTGGAGGACACTCAAG
ACTCATCAAGCTAATGGGACAGCATCAAGGACTTTTGGTGCACTTGACCCTGTTCAAGTC
ACCATGATGGCTAAGCATTTGGATTCAATTTATGTCTCTGGTTGGCAGTGTTCTTCAACT
CACACAAGTACTAATGAACCAGGGCCTGATCTTGCTGATTACCCTTATGATACTGTTCCT
AACAAAGTGGAACATTTGTTTTTTGCTCAGCAGTATCATGATAGGAAGCAGAGAGAAGCA
AGAATGAGCATGAGCAGAGAGGAGAGGGCAAGAACCCCTTTTATTGATTACTTGAAACCT
ATCATTGCTGATGGTGACACTGGATTTGGTGGTGCAACTGCTACTGTTAAGCTGTGTAAG
CTTTTCGTGGAGCGCGGTGCTGCTGGTGTCCACATTGAGGATCAGTCCTCTGTTACTAAG
AAATGTGGTCATATGGCTGGTAAAGTGCTTGTTGCTGTAAGTGAACATATTAACAGGCTT
GTGGCTGCAAGATTGCAGTTTGATATCATGGGGACTGAAACGGTCCTCGTGGCTCGTACT
GATGCGGTTGCAGCCACATTGATCCAAACCAATGTGGATACAAGGGATCACCAGTTCATT
TTGGGCGTTTCCAACCCGAATCTCAAGGGCAAGGGTTTGGCTACTCTTTTGTCTGAAGCT
ATGGCTGCAGGCAAAACAGGGCCGGAACTTCAAGCCATTGAGGATAACTGGCTTGGAATG
GCTGAACTCAAGACATTTTCTCAATGTGTCACTGATGCAATCAAGAAAATGAACCTCGCG
GAGCACGAGAAGCAGAGGAGGTTGAACCAGTGGATGAATCATTCGAGCTATGAGAAATGT
CTTTCGCACGAACAAGCTAGGGAGGTTGTTGAAAGACTTGGCCTTCCTAATCTCTTTTGG
GACTGGGACTTGCCAAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGTTCAGTAGAGGCT
GCAATTGTTCGCGGATGGGCTTTCGCCGAATACTGTGATCTAGTCTGGATGGAGACATCA
AGTCCTGATATGGTGGAATGCACAAAATTTTCTGAGGGAGTTAAGTCTCTAAGGCCTGAG
CTGATGTTGGCTTACAATCTGTCTCCGTCATTCAATTGGGATGCATCAGGAATGAATGAC
AACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTAGGCTATTGCTGGCAGTTCATT
ACTTTAGCTGGTTTCCATGCTGATGCACTCATCGTCGACACGTTTGCCAAGGATTTCGCC
AAGAGGGGAATGTTGGCCTATGTGGAGAAAATACAAAGAGAGGAAAGGAGCCATGGTGTT
GACACATTGGCTCATCAGAAATGGTCTGGTGCTAATTACTATGATAGAGTTCTAAGGACT
GTCCAGGGAGGCATCACCTCTACTGCTGCTATGGGCAAAGGTATAAACATGATTTTTACA
TGTCAGTGCATAAAACTTAAACTTCAAACACGAATTATTAGTAACATTGTATTCGAAATA
TGGTGA