Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400065506
CDS Infomation

pacid=37424703 polypeptide=PGSC0003DMP400044188 locus=PGSC0003DMG400025481 ID=PGSC0003DMT400065506.v4.03 annot-version=v4.03
Sequence

ATGGCTGTAGAGCTCATGATGAATTACATAAACACACCTAGTAATACTAACAATAGCTTC
ACAAGAAATTTAGAAGAAAAGGCAGTTATACAAGAAGCTGCCTCTGGCGTTGAGAGCGTT
GAAAAACTCATCAAATTATTATCACAGACTCAACAACTTGAACAGAAGCAAAAACAGGGG
AATTTTACTTGTTTCCTAAATCAAGAAAAATCATCCCCCATGGAGATTGAAATAGTGGCG
GATGCCGCTGTTACAAAGTTTAAGAAAGTAATTTCTCTTTTGGGTGGATCAAGAACTGGA
TATGCTCGATTCAGAAGAGCACCAATTGCTTCTCCTCTTCCTCCAGATCATTTCAAGAAA
GATTATGCTGATAGCAAAGTTTATTGTCCTACTCCAATTCAACAACTCCCTCCAATTGCC
TATGAATTTTATAATAAATTTGAAAAACAGGAATCCGTTACAAATACGATTAATTTTTCG
TATCCTCCTGAAATTTGTTGTTCAAATTCGTTCAATATCTCAACAATAACAGGGGAAACA
GAGAGTAAATATATTTCAAATCTTTCTTCAGTTGTTAAACCTCCCTTGTCTTCTTCTTCT
TCATTTAAAATTAGAAAGTGTACTTCGTCGGAGAATGGACTCTCCGGCATGTGCAGTGGC
TCCTCCGGTCGATGCCATTGCTCAAAGAGAAGGAAATTAAGACTTAAAAGAGTAGTTAGA
GTTCCAGCAATAAGCATGAAGTTGTCAGACATCCCACCTGATGATTATTCATGGAGGAAA
TATGGTCAAAAGCCAATTAAAGGATCTCCACATCCAAGGGCATATTACAAATGTAGTAGT
GTGAGAGGGTGTCCAGCACGTAAACATGTAGAAAGATCTCTAGATGAACCAACAATGCTT
ATGGTCACGTACGAAGGAGAGCATAACCATTCCCTTTCTATTGCAGAAACAAGTTGTGTC
ATTTTAGAGTCTGATCAATTTGTGGGCAATATCATTGTAAACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400044188
PEP Infomation

pacid=37424703 transcript=PGSC0003DMT400065506 locus=PGSC0003DMG400025481 ID=PGSC0003DMT400065506.v4.03 annot-version=v4.03
Sequence

MAVELMMNYINTPSNTNNSFTRNLEEKAVIQEAASGVESVEKLIKLLSQTQQLEQKQKQG
NFTCFLNQEKSSPMEIEIVADAAVTKFKKVISLLGGSRTGYARFRRAPIASPLPPDHFKK
DYADSKVYCPTPIQQLPPIAYEFYNKFEKQESVTNTINFSYPPEICCSNSFNISTITGET
ESKYISNLSSVVKPPLSSSSSFKIRKCTSSENGLSGMCSGSSGRCHCSKRRKLRLKRVVR
VPAISMKLSDIPPDDYSWRKYGQKPIKGSPHPRAYYKCSSVRGCPARKHVERSLDEPTML
MVTYEGEHNHSLSIAETSCVILESDQFVGNIIVN*

Transcript Sequence

Transcript ID

PGSC0003DMT400065506
Transcript Infomation

pacid=37424703 locus=PGSC0003DMG400025481 ID=PGSC0003DMT400065506.v4.03 annot-version=v4.03
Sequence

ATGGCTGTAGAGCTCATGATGAATTACATAAACACACCTAGTAATACTAACAATAGCTTC
ACAAGAAATTTAGAAGAAAAGGCAGTTATACAAGAAGCTGCCTCTGGCGTTGAGAGCGTT
GAAAAACTCATCAAATTATTATCACAGACTCAACAACTTGAACAGAAGCAAAAACAGGGG
AATTTTACTTGTTTCCTAAATCAAGAAAAATCATCCCCCATGGAGATTGAAATAGTGGCG
GATGCCGCTGTTACAAAGTTTAAGAAAGTAATTTCTCTTTTGGGTGGATCAAGAACTGGA
TATGCTCGATTCAGAAGAGCACCAATTGCTTCTCCTCTTCCTCCAGATCATTTCAAGAAA
GATTATGCTGATAGCAAAGTTTATTGTCCTACTCCAATTCAACAACTCCCTCCAATTGCC
TATGAATTTTATAATAAATTTGAAAAACAGGAATCCGTTACAAATACGATTAATTTTTCG
TATCCTCCTGAAATTTGTTGTTCAAATTCGTTCAATATCTCAACAATAACAGGGGAAACA
GAGAGTAAATATATTTCAAATCTTTCTTCAGTTGTTAAACCTCCCTTGTCTTCTTCTTCT
TCATTTAAAATTAGAAAGTGTACTTCGTCGGAGAATGGACTCTCCGGCATGTGCAGTGGC
TCCTCCGGTCGATGCCATTGCTCAAAGAGAAGGAAATTAAGACTTAAAAGAGTAGTTAGA
GTTCCAGCAATAAGCATGAAGTTGTCAGACATCCCACCTGATGATTATTCATGGAGGAAA
TATGGTCAAAAGCCAATTAAAGGATCTCCACATCCAAGGGCATATTACAAATGTAGTAGT
GTGAGAGGGTGTCCAGCACGTAAACATGTAGAAAGATCTCTAGATGAACCAACAATGCTT
ATGGTCACGTACGAAGGAGAGCATAACCATTCCCTTTCTATTGCAGAAACAAGTTGTGTC
ATTTTAGAGTCTGATCAATTTGTGGGCAATATCATTGTAAACTAG