Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400065483
CDS Infomation

pacid=37471180 polypeptide=PGSC0003DMP400044167 locus=PGSC0003DMG400025465 ID=PGSC0003DMT400065483.v4.03 annot-version=v4.03
Sequence

ATGGGTTTTAGGCTGCATCTCAAATGGGGTTTCTCTGTCCAACCCCCTTTCTCCTCCAAT
TCATCATCATGGCCTTCTTCACATTCTTTCAAAGGACGGGAAGCTTTATACGATCCAGCT
AGGTCTCTTAAACCTTTTATAACTGGCGACTGTGAACCTTCACACAGTGATCCTTTCAGG
GTGCAGACTTGTTTATCTGACCCCCAACTGTGGACTAGTGATACATCAGTAACTACAGAA
ATAAAGACGCGAAATGGCAGAGGGTCCCCTAGCAATGTATATGGAGATATTGGCAGTCAT
AAGATTGGGATATCGCCTGACGGGGAGAAACCAACATATTTAAATACAACCAAATCTCTT
CATTTTAGTTTACTAATGAAAAATCTTGATCTGCTGGAAAACATGTTTGCTGATTCAGAG
ATGTCAAGATTAGAAAGAGATATTTTGGTGCAACTAGAAAAGCTTGGAGCTTTAGAATTC
TTTCATACTTGTCTCTCAAGGACACATCATTCTTCTACTTTTCCTAAGGTTCTTGATGTG
CCAAGGGAGCTTATTAAAGAAGTTGAGAAAGACGACCTTGTTGGAAATGCAATAGATAAG
GTTGTCGTACGTTCTAGGAAAAAGCAAGAGCGGAAGTCAAGAAGAAACAGAGCATCCAGA
AATGCCAATGACATTATTACAGTGCAGCCGCATACCAAAAACATCCAGGAGGATTTGCAA
CAGCCAAAGTTCTATTCTGGGAAAAGAACACAAGCCTCTAGAAATAAAAGACAGAAAATT
GCTAAGAATGAGGCAGAAATGTCAAGAGGTGTTAAGTTGGTGGCACAGTTGGAAAGGATC
AGGTCAATCCTTGAAGAAGAAACTGGTCGAGTAGCTACTTTCAGTAGCTGGGCAGAAGCT
GCTGGGATTGAACAGAAGGAGCTGCAGCAACGCCTGCATTTTGGTTGGTACTGCAGGGAT
GAGCTTCTGAAAAGTACACGGTCCTTAGTCTTATATCTGGCAAGAAACTACAGGGGGCTT
GGAGTGGCATTTGAAGACTTAATTCAGGCTGGAAACATGGGTGTTCTACAAGGTGCTGTA
AGGTTTGACCACACTAGGGGATACAAATTCTCAACTTACGTTCAGTATTGGATACGAAAA
TCATTGTCAAAATTGGTGGCACAACATGCCAGAGGGGTTCGAATTCCCTTCACTATATGC
AAAGTAATAAATCAAATACATAAAGCTCGAAAAACTCTCAGTAGGAGCCATGGAAAATTT
CCAGCTGACGATGAAATTGCCAAGTTCACGGGTCTATCCACAGCTCGGATTGCAATGGCT
AGTAAATGTCTGAGAGTTGTTGGTTCAATTGATCAGAAAGTTGGAGATTGCATCAGCGCA
AAAGTTTTGGAACTCACACCCGATAAATCAATTACAAGCCCAGAGGAAACTGTCATGAGG
CAAGACATAGTAGACAACATGTATTCTCTTTTGGAAAGTTTGGATCCAAAAGAGCAGCAA
GTAATATATTTTAGGTTTGGTCTTGAAACTCATCAACGCAAATCACTCGAGGAGATTGGG
AGGCTTTATGGAGTTAGTAAAGAATGGATTAGGAGAATAGAACGAAGAGCTCTCACCAAA
TTAAGAAACGCGGATTATTTCCAACATATAACTCATTACTCTATGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400044167
PEP Infomation

pacid=37471180 transcript=PGSC0003DMT400065483 locus=PGSC0003DMG400025465 ID=PGSC0003DMT400065483.v4.03 annot-version=v4.03
Sequence

MGFRLHLKWGFSVQPPFSSNSSSWPSSHSFKGREALYDPARSLKPFITGDCEPSHSDPFR
VQTCLSDPQLWTSDTSVTTEIKTRNGRGSPSNVYGDIGSHKIGISPDGEKPTYLNTTKSL
HFSLLMKNLDLLENMFADSEMSRLERDILVQLEKLGALEFFHTCLSRTHHSSTFPKVLDV
PRELIKEVEKDDLVGNAIDKVVVRSRKKQERKSRRNRASRNANDIITVQPHTKNIQEDLQ
QPKFYSGKRTQASRNKRQKIAKNEAEMSRGVKLVAQLERIRSILEEETGRVATFSSWAEA
AGIEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAV
RFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQIHKARKTLSRSHGKF
PADDEIAKFTGLSTARIAMASKCLRVVGSIDQKVGDCISAKVLELTPDKSITSPEETVMR
QDIVDNMYSLLESLDPKEQQVIYFRFGLETHQRKSLEEIGRLYGVSKEWIRRIERRALTK
LRNADYFQHITHYSM*

Transcript Sequence

Transcript ID

PGSC0003DMT400065483
Transcript Infomation

pacid=37471180 locus=PGSC0003DMG400025465 ID=PGSC0003DMT400065483.v4.03 annot-version=v4.03
Sequence

ATGGGTTTTAGGCTGCATCTCAAATGGGGTTTCTCTGTCCAACCCCCTTTCTCCTCCAAT
TCATCATCATGGCCTTCTTCACATTCTTTCAAAGGACGGGAAGCTTTATACGATCCAGCT
AGGTCTCTTAAACCTTTTATAACTGGCGACTGTGAACCTTCACACAGTGATCCTTTCAGG
GTGCAGACTTGTTTATCTGACCCCCAACTGTGGACTAGTGATACATCAGTAACTACAGAA
ATAAAGACGCGAAATGGCAGAGGGTCCCCTAGCAATGTATATGGAGATATTGGCAGTCAT
AAGATTGGGATATCGCCTGACGGGGAGAAACCAACATATTTAAATACAACCAAATCTCTT
CATTTTAGTTTACTAATGAAAAATCTTGATCTGCTGGAAAACATGTTTGCTGATTCAGAG
ATGTCAAGATTAGAAAGAGATATTTTGGTGCAACTAGAAAAGCTTGGAGCTTTAGAATTC
TTTCATACTTGTCTCTCAAGGACACATCATTCTTCTACTTTTCCTAAGGTTCTTGATGTG
CCAAGGGAGCTTATTAAAGAAGTTGAGAAAGACGACCTTGTTGGAAATGCAATAGATAAG
GTTGTCGTACGTTCTAGGAAAAAGCAAGAGCGGAAGTCAAGAAGAAACAGAGCATCCAGA
AATGCCAATGACATTATTACAGTGCAGCCGCATACCAAAAACATCCAGGAGGATTTGCAA
CAGCCAAAGTTCTATTCTGGGAAAAGAACACAAGCCTCTAGAAATAAAAGACAGAAAATT
GCTAAGAATGAGGCAGAAATGTCAAGAGGTGTTAAGTTGGTGGCACAGTTGGAAAGGATC
AGGTCAATCCTTGAAGAAGAAACTGGTCGAGTAGCTACTTTCAGTAGCTGGGCAGAAGCT
GCTGGGATTGAACAGAAGGAGCTGCAGCAACGCCTGCATTTTGGTTGGTACTGCAGGGAT
GAGCTTCTGAAAAGTACACGGTCCTTAGTCTTATATCTGGCAAGAAACTACAGGGGGCTT
GGAGTGGCATTTGAAGACTTAATTCAGGCTGGAAACATGGGTGTTCTACAAGGTGCTGTA
AGGTTTGACCACACTAGGGGATACAAATTCTCAACTTACGTTCAGTATTGGATACGAAAA
TCATTGTCAAAATTGGTGGCACAACATGCCAGAGGGGTTCGAATTCCCTTCACTATATGC
AAAGTAATAAATCAAATACATAAAGCTCGAAAAACTCTCAGTAGGAGCCATGGAAAATTT
CCAGCTGACGATGAAATTGCCAAGTTCACGGGTCTATCCACAGCTCGGATTGCAATGGCT
AGTAAATGTCTGAGAGTTGTTGGTTCAATTGATCAGAAAGTTGGAGATTGCATCAGCGCA
AAAGTTTTGGAACTCACACCCGATAAATCAATTACAAGCCCAGAGGAAACTGTCATGAGG
CAAGACATAGTAGACAACATGTATTCTCTTTTGGAAAGTTTGGATCCAAAAGAGCAGCAA
GTAATATATTTTAGGTTTGGTCTTGAAACTCATCAACGCAAATCACTCGAGGAGATTGGG
AGGCTTTATGGAGTTAGTAAAGAATGGATTAGGAGAATAGAACGAAGAGCTCTCACCAAA
TTAAGAAACGCGGATTATTTCCAACATATAACTCATTACTCTATGTAG