Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400065411
CDS Infomation

pacid=37474737 polypeptide=PGSC0003DMP400044110 locus=PGSC0003DMG402025430 ID=PGSC0003DMT400065411.v4.03 annot-version=v4.03
Sequence

ATGGCAGCAGCATCAGCAACTACTCTCTCAGTTGGTTCCGCTACATCCTTTGGCTCCATA
GCGAGCCCAAAATTACAATCAAAAGCCTTCATTGTGAAATACAATACCAGGAACTACCTT
AGGAATTTCAGTGGCCTTAAGGCAGAGGCATTTGTACGATGTGAATCCGAGTCGTCATTT
CTAGGAAATGAAAGTGTTGCAGCTCTTCGACAATCCATTACTCCTAAAGCCCGAAACGAA
AAGCAGAGATCTTGGAACCATGTTCAGCCCCAAGCATCTTATAAAGTGGCTGTTCTTGGA
GCCTCTGGCGGTATAGGCCAGTCTCTAGCTCTTCTGATTAAGATGTCGCCGCTAGTATCA
TCGTTGCACCTTTATGATATTGCAAATGTCAAAGGAGTCGCAGCAGATCTCAGCCATTGC
AACACTCCCGCTCAGGTTTTTGACTTTACGGGAGCTTCTGAGTTGGCCAATTCTTTGAAA
GGTGTAGACGTAGTTGTCATACCAGCTGGCGTTCCGAGAAAGCCTGGTATGACACGAGAC
GACTTGTTCAACATTAATGCTAATATTGTGAAAGGCTTGGTTGAGGCTGTTGCTGACAAC
TGCCCAGATGCCTTTATCCACATTATCAGCAATCCAGTCAACTCCACAGTGCCGATTGCT
GCCGAGGTTCTGAAGCAAAAGGGTGTTTATGATCCTAAAAAACTCTTTGGTGTTACCACC
CTGGACGTTGTCAGGGCAAACACGTTCGTCGCGCAGAAGAAAAACCTGAAACTCATAGAC
GTTGACGTCCCCGTGATTGGTGGGCACGCAGGGATAACAATTCTGCCTTTGCTGTCAAAG
ACAAGACCATCAACTACTTTCACCGCAGAAGAAGTGCAGGAACTAACCGTGAGGATCCAA
AATGCTGGGACCGAGGTCGTTGAGGCAAAGGCTGGAGCAGGATCTGCAACACTGTCAATG
GCATATGCAGCAGCTAGATTTATCGAATCCTCACTTCGTGCCCTTGATGGTGATGCTGAT
GTTTACGAGTGTTCTTACGTGCAATCTGACTTGACGGAACTTCCATTCTTTGCATCAAGA
GTTAAACTAGGAAGGAATGGCGTCGAGGCTTTGATTTCATCTGATCTCCGTGGATTAACT
GAGTATGAACAAAAGGCATTGGAAGCTCTAAAGCCAGAGTTGAAAGCTAGCATTGAGAAA
GGGATAACTTATGCTCAAAAACAAACAGTGACTGCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400044110
PEP Infomation

pacid=37474737 transcript=PGSC0003DMT400065411 locus=PGSC0003DMG402025430 ID=PGSC0003DMT400065411.v4.03 annot-version=v4.03
Sequence

MAAASATTLSVGSATSFGSIASPKLQSKAFIVKYNTRNYLRNFSGLKAEAFVRCESESSF
LGNESVAALRQSITPKARNEKQRSWNHVQPQASYKVAVLGASGGIGQSLALLIKMSPLVS
SLHLYDIANVKGVAADLSHCNTPAQVFDFTGASELANSLKGVDVVVIPAGVPRKPGMTRD
DLFNINANIVKGLVEAVADNCPDAFIHIISNPVNSTVPIAAEVLKQKGVYDPKKLFGVTT
LDVVRANTFVAQKKNLKLIDVDVPVIGGHAGITILPLLSKTRPSTTFTAEEVQELTVRIQ
NAGTEVVEAKAGAGSATLSMAYAAARFIESSLRALDGDADVYECSYVQSDLTELPFFASR
VKLGRNGVEALISSDLRGLTEYEQKALEALKPELKASIEKGITYAQKQTVTA*

Transcript Sequence

Transcript ID

PGSC0003DMT400065411
Transcript Infomation

pacid=37474737 locus=PGSC0003DMG402025430 ID=PGSC0003DMT400065411.v4.03 annot-version=v4.03
Sequence

ATGGCAGCAGCATCAGCAACTACTCTCTCAGTTGGTTCCGCTACATCCTTTGGCTCCATA
GCGAGCCCAAAATTACAATCAAAAGCCTTCATTGTGAAATACAATACCAGGAACTACCTT
AGGAATTTCAGTGGCCTTAAGGCAGAGGCATTTGTACGATGTGAATCCGAGTCGTCATTT
CTAGGAAATGAAAGTGTTGCAGCTCTTCGACAATCCATTACTCCTAAAGCCCGAAACGAA
AAGCAGAGATCTTGGAACCATGTTCAGCCCCAAGCATCTTATAAAGTGGCTGTTCTTGGA
GCCTCTGGCGGTATAGGCCAGTCTCTAGCTCTTCTGATTAAGATGTCGCCGCTAGTATCA
TCGTTGCACCTTTATGATATTGCAAATGTCAAAGGAGTCGCAGCAGATCTCAGCCATTGC
AACACTCCCGCTCAGGTTTTTGACTTTACGGGAGCTTCTGAGTTGGCCAATTCTTTGAAA
GGTGTAGACGTAGTTGTCATACCAGCTGGCGTTCCGAGAAAGCCTGGTATGACACGAGAC
GACTTGTTCAACATTAATGCTAATATTGTGAAAGGCTTGGTTGAGGCTGTTGCTGACAAC
TGCCCAGATGCCTTTATCCACATTATCAGCAATCCAGTCAACTCCACAGTGCCGATTGCT
GCCGAGGTTCTGAAGCAAAAGGGTGTTTATGATCCTAAAAAACTCTTTGGTGTTACCACC
CTGGACGTTGTCAGGGCAAACACGTTCGTCGCGCAGAAGAAAAACCTGAAACTCATAGAC
GTTGACGTCCCCGTGATTGGTGGGCACGCAGGGATAACAATTCTGCCTTTGCTGTCAAAG
ACAAGACCATCAACTACTTTCACCGCAGAAGAAGTGCAGGAACTAACCGTGAGGATCCAA
AATGCTGGGACCGAGGTCGTTGAGGCAAAGGCTGGAGCAGGATCTGCAACACTGTCAATG
GCATATGCAGCAGCTAGATTTATCGAATCCTCACTTCGTGCCCTTGATGGTGATGCTGAT
GTTTACGAGTGTTCTTACGTGCAATCTGACTTGACGGAACTTCCATTCTTTGCATCAAGA
GTTAAACTAGGAAGGAATGGCGTCGAGGCTTTGATTTCATCTGATCTCCGTGGATTAACT
GAGTATGAACAAAAGGCATTGGAAGCTCTAAAGCCAGAGTTGAAAGCTAGCATTGAGAAA
GGGATAACTTATGCTCAAAAACAAACAGTGACTGCTTAG