Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400065401
CDS Infomation

pacid=37473954 polypeptide=PGSC0003DMP400044101 locus=PGSC0003DMG400025425 ID=PGSC0003DMT400065401.v4.03 annot-version=v4.03
Sequence

ATGTTTGGGAGAGCACCGAAGAAGAGTGATAACACCAAGTACTATGAGATCTTGGGAGTG
CCTAATACTGCTTCACCAGATGATCTAAAGAAAGCTTATCGTAAAGCCGCTATTAAGAAT
CATCCTGATAAGGGTGGTGATCCTGAAAAATTTAAGGAGATTGCCCAAGCGTATGAGGTT
TTGAATGACCCAGAGAAACGTGAGATCTATGATCAGTATGGTGAAGATGCTCTCAAGGAA
GGAATGGGTGGTGGAGGTGGTGGACACGATCCGTTTGACATATTCCAGTCATTCTTTGGT
GGAGGCGGGTTTGGTGGTGGTGGAAGCAGCAGAGGAAGAAGGCAAAGGAGAGGGGAGGAT
GTTGTCCACCCTCTCAAGGTTTCTTTGGAGGATCTTTACAATGGGATATCAAAGAAGCTA
TCACTATCTCGCAATGTGTTGTGCACAAAGTGCAAGGGGGCAGGGTCTAAATCAGGTGCT
TCATTGAAATGTCCTGGATGCCAAGGTAAAGGAATGAAAGTTTCGATCAGACAACTTGGC
CCTATGATCCAGCAGATGCAGCACCCATGTAATGATTGTAGGGGTACTGGTGAGAAAATC
AACGAGAAAGACAGGTGTCCACAGTGCAAGGGTGAGAAAGTTGTGCAGGAGAAGAAGGTG
TTGGAAGTTGTTGTGGATAAGGGTATGCAAAATGGACAAAAGATAACATTTCCAGGAGAG
GCTGATGAAGAGCCTGATACTGTCACTGGAGACATAGTTTTTATCTTGCAACAGAAGGAA
CATCCCAAGTTTAAGCGAAAGGGAGATGACCTCTTTGTAGAACACACCTTGACCTTGACT
GAGGCTCTCTGTGGTTTTCAGTTTGTCTTGACTCACCTAGATAATAGACAGCTGATAATC
AAGTCCCAACCTGGAGAAGTTGTCAAGCCTGATCAATTTAAGGCCATAAATGATGAAGGA
ATGCCAATGTACCAAAGGCCATTCATGAAAGGGAAACTGTACATTCACTTCACTGTGGAC
TTCCCCAACATATTAACCCCAGAGTTGTGCAAGAATCTTGAAGCAGTGCTGCCAGCAAGG
CCTAAAACACAAGCGTCCGATATGGAATTGGACGAGTGTGAGGAAACCACCTTGCATGAT
GTGAACATTGACGAGGAGATGCGTAGGAAGCAGCAGCAACAGGCCCAAGAGGCATACGAT
GAAGATGATGACGATATGCATGGTGGCGGTGCACAGAGAGTGCAATGTGCACAACAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400044101
PEP Infomation

pacid=37473954 transcript=PGSC0003DMT400065401 locus=PGSC0003DMG400025425 ID=PGSC0003DMT400065401.v4.03 annot-version=v4.03
Sequence

MFGRAPKKSDNTKYYEILGVPNTASPDDLKKAYRKAAIKNHPDKGGDPEKFKEIAQAYEV
LNDPEKREIYDQYGEDALKEGMGGGGGGHDPFDIFQSFFGGGGFGGGGSSRGRRQRRGED
VVHPLKVSLEDLYNGISKKLSLSRNVLCTKCKGAGSKSGASLKCPGCQGKGMKVSIRQLG
PMIQQMQHPCNDCRGTGEKINEKDRCPQCKGEKVVQEKKVLEVVVDKGMQNGQKITFPGE
ADEEPDTVTGDIVFILQQKEHPKFKRKGDDLFVEHTLTLTEALCGFQFVLTHLDNRQLII
KSQPGEVVKPDQFKAINDEGMPMYQRPFMKGKLYIHFTVDFPNILTPELCKNLEAVLPAR
PKTQASDMELDECEETTLHDVNIDEEMRRKQQQQAQEAYDEDDDDMHGGGAQRVQCAQQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400065401
Transcript Infomation

pacid=37473954 locus=PGSC0003DMG400025425 ID=PGSC0003DMT400065401.v4.03 annot-version=v4.03
Sequence

ATGTTTGGGAGAGCACCGAAGAAGAGTGATAACACCAAGTACTATGAGATCTTGGGAGTG
CCTAATACTGCTTCACCAGATGATCTAAAGAAAGCTTATCGTAAAGCCGCTATTAAGAAT
CATCCTGATAAGGGTGGTGATCCTGAAAAATTTAAGGAGATTGCCCAAGCGTATGAGGTT
TTGAATGACCCAGAGAAACGTGAGATCTATGATCAGTATGGTGAAGATGCTCTCAAGGAA
GGAATGGGTGGTGGAGGTGGTGGACACGATCCGTTTGACATATTCCAGTCATTCTTTGGT
GGAGGCGGGTTTGGTGGTGGTGGAAGCAGCAGAGGAAGAAGGCAAAGGAGAGGGGAGGAT
GTTGTCCACCCTCTCAAGGTTTCTTTGGAGGATCTTTACAATGGGATATCAAAGAAGCTA
TCACTATCTCGCAATGTGTTGTGCACAAAGTGCAAGGGGGCAGGGTCTAAATCAGGTGCT
TCATTGAAATGTCCTGGATGCCAAGGTAAAGGAATGAAAGTTTCGATCAGACAACTTGGC
CCTATGATCCAGCAGATGCAGCACCCATGTAATGATTGTAGGGGTACTGGTGAGAAAATC
AACGAGAAAGACAGGTGTCCACAGTGCAAGGGTGAGAAAGTTGTGCAGGAGAAGAAGGTG
TTGGAAGTTGTTGTGGATAAGGGTATGCAAAATGGACAAAAGATAACATTTCCAGGAGAG
GCTGATGAAGAGCCTGATACTGTCACTGGAGACATAGTTTTTATCTTGCAACAGAAGGAA
CATCCCAAGTTTAAGCGAAAGGGAGATGACCTCTTTGTAGAACACACCTTGACCTTGACT
GAGGCTCTCTGTGGTTTTCAGTTTGTCTTGACTCACCTAGATAATAGACAGCTGATAATC
AAGTCCCAACCTGGAGAAGTTGTCAAGCCTGATCAATTTAAGGCCATAAATGATGAAGGA
ATGCCAATGTACCAAAGGCCATTCATGAAAGGGAAACTGTACATTCACTTCACTGTGGAC
TTCCCCAACATATTAACCCCAGAGTTGTGCAAGAATCTTGAAGCAGTGCTGCCAGCAAGG
CCTAAAACACAAGCGTCCGATATGGAATTGGACGAGTGTGAGGAAACCACCTTGCATGAT
GTGAACATTGACGAGGAGATGCGTAGGAAGCAGCAGCAACAGGCCCAAGAGGCATACGAT
GAAGATGATGACGATATGCATGGTGGCGGTGCACAGAGAGTGCAATGTGCACAACAGTAA