Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400065277
CDS Infomation

pacid=37465483 polypeptide=PGSC0003DMP400044017 locus=PGSC0003DMG400025374 ID=PGSC0003DMT400065277.v4.03 annot-version=v4.03
Sequence

ATGGCGGCCACCATTGTTAGGTCACCGAAGCTTTCCCTCTCCCTTCCTACTCCTGAATCA
ACTACCTCAAATCTACCATCTCTAAACCAGAGTTTTTTCACTCCGTTACCTAAACGACGT
CGTTGTATCTCGATCTACGCATGTACCGCTGGTGACCAGAGTAACAGTGCATTTGGAGGT
GAAATTAAGAAAGGACAAGCGATTGAGCTTAACAAAGTTAATGATGAGAATCCTTATGAA
TTTAATGCTAAGGATTCACCTAATCCCTTGCCTAGGCCATTAACTTCGGCTGATTTGAGC
AATATGGCTTCTGAAGGTTCTCGTCTTCGGGTTGCTTATCAGGGTGTGCGTGGTGCTTAT
AGTGAATCAGCTGCAGAGAAAGCATACCCCAACTGTGAAGCAGTTCCGTGCGAACAATTT
GATACTGCTTTTGACGCTGTTGAAAGGTGGCTTGTTGATAGAGCAGTTTTACCAATAGAA
AACTCTTTAGGGGGGAGTATTCACAGGAATTATGACCTTTTGCTGAGATATCGTTTACAT
ATAGTTGGAGAAGTCAAACTAGCAATTCGACACTGTTTGCTGGCTAACAATGGCGTCAAA
ATCGAAGACCTGAAAAGAGTTCTTAGCCATCCGCAGGCTCTTGCTCAGTGTGAGAACACA
TTAACGAAGTTGGGATTGGTCAGAGAAGCCGTAGATGATACTGCTGGTGCAGCCAAGTAT
ATTGCTTTCAGCAAACTCAAAGATGCAGGAGCAGTTGCAAGTTTAGCTGCATCTAGGATC
TATGGTTTGAATGTGCTTGCACAAGATATTCAGGATGATTCTGATAATGTCACCCGCTTC
CTTATGCTGGCTAGGGAGCCCATTATTCCTCGTACTGATAAACCATTCAAGACAAGTGTA
GTCTTTTCACTTGATGAAGGTCCGGGAGTGCTTTTCAAGGCACTAGCCGTTTTTGCCATG
CGGAGTATTAACCTTACCAAGATTGAGAGTCGTCCACTGCAAAAGCAGGCTTTGCGGGTG
CTTGAGGATAGTGTAGATGGATTTCCAAAGTACTTCCCTTACCTTTTCTATGTTGATTTC
GAAGCATCAATGGCTGATCAAAGAGCTCAAAATGCTCTGGGACATCTAAAGGAATTTGCT
ACCTTTTTGCGAGTTTTAGGAAGTTACCCTTCAGATAGTGGAATAGCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400044017
PEP Infomation

pacid=37465483 transcript=PGSC0003DMT400065277 locus=PGSC0003DMG400025374 ID=PGSC0003DMT400065277.v4.03 annot-version=v4.03
Sequence

MAATIVRSPKLSLSLPTPESTTSNLPSLNQSFFTPLPKRRRCISIYACTAGDQSNSAFGG
EIKKGQAIELNKVNDENPYEFNAKDSPNPLPRPLTSADLSNMASEGSRLRVAYQGVRGAY
SESAAEKAYPNCEAVPCEQFDTAFDAVERWLVDRAVLPIENSLGGSIHRNYDLLLRYRLH
IVGEVKLAIRHCLLANNGVKIEDLKRVLSHPQALAQCENTLTKLGLVREAVDDTAGAAKY
IAFSKLKDAGAVASLAASRIYGLNVLAQDIQDDSDNVTRFLMLAREPIIPRTDKPFKTSV
VFSLDEGPGVLFKALAVFAMRSINLTKIESRPLQKQALRVLEDSVDGFPKYFPYLFYVDF
EASMADQRAQNALGHLKEFATFLRVLGSYPSDSGIA*

Transcript Sequence

Transcript ID

PGSC0003DMT400065277
Transcript Infomation

pacid=37465483 locus=PGSC0003DMG400025374 ID=PGSC0003DMT400065277.v4.03 annot-version=v4.03
Sequence

ATGGCGGCCACCATTGTTAGGTCACCGAAGCTTTCCCTCTCCCTTCCTACTCCTGAATCA
ACTACCTCAAATCTACCATCTCTAAACCAGAGTTTTTTCACTCCGTTACCTAAACGACGT
CGTTGTATCTCGATCTACGCATGTACCGCTGGTGACCAGAGTAACAGTGCATTTGGAGGT
GAAATTAAGAAAGGACAAGCGATTGAGCTTAACAAAGTTAATGATGAGAATCCTTATGAA
TTTAATGCTAAGGATTCACCTAATCCCTTGCCTAGGCCATTAACTTCGGCTGATTTGAGC
AATATGGCTTCTGAAGGTTCTCGTCTTCGGGTTGCTTATCAGGGTGTGCGTGGTGCTTAT
AGTGAATCAGCTGCAGAGAAAGCATACCCCAACTGTGAAGCAGTTCCGTGCGAACAATTT
GATACTGCTTTTGACGCTGTTGAAAGGTGGCTTGTTGATAGAGCAGTTTTACCAATAGAA
AACTCTTTAGGGGGGAGTATTCACAGGAATTATGACCTTTTGCTGAGATATCGTTTACAT
ATAGTTGGAGAAGTCAAACTAGCAATTCGACACTGTTTGCTGGCTAACAATGGCGTCAAA
ATCGAAGACCTGAAAAGAGTTCTTAGCCATCCGCAGGCTCTTGCTCAGTGTGAGAACACA
TTAACGAAGTTGGGATTGGTCAGAGAAGCCGTAGATGATACTGCTGGTGCAGCCAAGTAT
ATTGCTTTCAGCAAACTCAAAGATGCAGGAGCAGTTGCAAGTTTAGCTGCATCTAGGATC
TATGGTTTGAATGTGCTTGCACAAGATATTCAGGATGATTCTGATAATGTCACCCGCTTC
CTTATGCTGGCTAGGGAGCCCATTATTCCTCGTACTGATAAACCATTCAAGACAAGTGTA
GTCTTTTCACTTGATGAAGGTCCGGGAGTGCTTTTCAAGGCACTAGCCGTTTTTGCCATG
CGGAGTATTAACCTTACCAAGATTGAGAGTCGTCCACTGCAAAAGCAGGCTTTGCGGGTG
CTTGAGGATAGTGTAGATGGATTTCCAAAGTACTTCCCTTACCTTTTCTATGTTGATTTC
GAAGCATCAATGGCTGATCAAAGAGCTCAAAATGCTCTGGGACATCTAAAGGAATTTGCT
ACCTTTTTGCGAGTTTTAGGAAGTTACCCTTCAGATAGTGGAATAGCTTGA