Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400065249
CDS Infomation

pacid=37467344 polypeptide=PGSC0003DMP400043993 locus=PGSC0003DMG400025360 ID=PGSC0003DMT400065249.v4.03 annot-version=v4.03
Sequence

ATGGCTTCCCCTAACAACAACAAATCGAAGAATCAATTAGTTTCCACTATGATCAAACAA
GGTTTCATTTCCAACCCATATCTATCTCCTTCTCCTTCCCCACCTCGTACCTCCAACCCA
CCTTCCCCTATCCAAATTCCGACCCGACCCAGTAATCCTAGCCCGACCCTTTTCGAGATG
ATGTCAGAGGAGCAGACCCGCGAGTCCAAACACTCACTCGAATCGCGATACCGAACGCAA
GAGAGAGTTTCGAGGGTTTTGGCTGAAGCTCCGTTTCCGGCGGTGGGTGATGTCAGGCTG
ACGATAGCGGCGCGTGATGGGTTTAAAGTTTCTATGGATGTTCACCGGAGAGTGCTAGTC
GGACGGAGTAGGTTTTTCGCTGATAAGCTTCAGAGAAATGGGTCGCATTCGGTTGAGATT
CTTGATTGTGATGACGTGGAGGTTTATGTGGAAACATTGGTGCTTATGTATTGTGATGAT
TTGAAGAAGAGATTGATGGGTGAAAATGTTAACAAGGTCCTGGGATTGCTTAAGATATCG
TCAGCAATTATGTTTGATGATGGAGTGTTGGCTTGTTTGGAGTATCTGGAGGCTGTTCCT
TGGTCCCAACAAGAAGAGGAACAAGTAGTATCTCATCTCAGTCAACTTCAGCTTCCCGAT
TCAGCAGCTGATATACTTCAGAGACTGGTTGCTGAACCATCAACATCTTCAAGATCCGAT
GACATTCTTCAGAGGATACTTACTGGTGTTTTACATGCCAAGGATGATAAAGCCCGCAAA
GAGATGAAAAAAGTGATATCTCGTTTGCTAAGAGAAAACACTAGCAATAGTAGCAGTCAT
GAAAGTAATCTTGATATCTCAAGGGATGCTCTCTATCATTTTTGTCATAGATGCCTCACT
TCTCTAATACTTAGCTTGTCTGAAGCTACATCCGTGGATGATAACAGGCAGCAGGACCGA
GGGGTTCTAATGGGTGAGATTGCTCGTGAAGCAGACAATCTGCAGTGGCTAGTTGATATC
CTAATCGACAGGAAAATGGGGGATGAGTTTGTGAAACTATGGGCAGAACAAAAAGAACTC
TCCATTCTTCACTCCAAGATTCCCACCATGTATCGACATGAAATCAGCAAGATCACTGCA
CAACTTTGCATTGCAATTGGTAGGGGAAATTTGTTAGTGCCAAAAGATGTTAGATATTGT
TTGTTATCGACATGGCTGGAAAGTCTATATGACGATTTTGGGTGGATGAAGAGGGCTGGT
AGATCAATTGACAAGAAGCTGGTTGAAGAGGGACTTGGTCAGACTATTCTAACACTACCC
TTGGCTCAACAACAAACCATTCTGCTTAACTGGTTCGATCGATTCCTTAACAAAGGAGAT
GACTGTCCCAATATTCAGAGAGCTTTCGAAGTTTGGTGGAGAAGGTCATTCGTTAAACAA
TACACAGTCGATTCTCAGTTACAATTAGCTATCTTCGATTATACAGAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400043993
PEP Infomation

pacid=37467344 transcript=PGSC0003DMT400065249 locus=PGSC0003DMG400025360 ID=PGSC0003DMT400065249.v4.03 annot-version=v4.03
Sequence

MASPNNNKSKNQLVSTMIKQGFISNPYLSPSPSPPRTSNPPSPIQIPTRPSNPSPTLFEM
MSEEQTRESKHSLESRYRTQERVSRVLAEAPFPAVGDVRLTIAARDGFKVSMDVHRRVLV
GRSRFFADKLQRNGSHSVEILDCDDVEVYVETLVLMYCDDLKKRLMGENVNKVLGLLKIS
SAIMFDDGVLACLEYLEAVPWSQQEEEQVVSHLSQLQLPDSAADILQRLVAEPSTSSRSD
DILQRILTGVLHAKDDKARKEMKKVISRLLRENTSNSSSHESNLDISRDALYHFCHRCLT
SLILSLSEATSVDDNRQQDRGVLMGEIAREADNLQWLVDILIDRKMGDEFVKLWAEQKEL
SILHSKIPTMYRHEISKITAQLCIAIGRGNLLVPKDVRYCLLSTWLESLYDDFGWMKRAG
RSIDKKLVEEGLGQTILTLPLAQQQTILLNWFDRFLNKGDDCPNIQRAFEVWWRRSFVKQ
YTVDSQLQLAIFDYTE*

Transcript Sequence

Transcript ID

PGSC0003DMT400065249
Transcript Infomation

pacid=37467344 locus=PGSC0003DMG400025360 ID=PGSC0003DMT400065249.v4.03 annot-version=v4.03
Sequence

ATGGCTTCCCCTAACAACAACAAATCGAAGAATCAATTAGTTTCCACTATGATCAAACAA
GGTTTCATTTCCAACCCATATCTATCTCCTTCTCCTTCCCCACCTCGTACCTCCAACCCA
CCTTCCCCTATCCAAATTCCGACCCGACCCAGTAATCCTAGCCCGACCCTTTTCGAGATG
ATGTCAGAGGAGCAGACCCGCGAGTCCAAACACTCACTCGAATCGCGATACCGAACGCAA
GAGAGAGTTTCGAGGGTTTTGGCTGAAGCTCCGTTTCCGGCGGTGGGTGATGTCAGGCTG
ACGATAGCGGCGCGTGATGGGTTTAAAGTTTCTATGGATGTTCACCGGAGAGTGCTAGTC
GGACGGAGTAGGTTTTTCGCTGATAAGCTTCAGAGAAATGGGTCGCATTCGGTTGAGATT
CTTGATTGTGATGACGTGGAGGTTTATGTGGAAACATTGGTGCTTATGTATTGTGATGAT
TTGAAGAAGAGATTGATGGGTGAAAATGTTAACAAGGTCCTGGGATTGCTTAAGATATCG
TCAGCAATTATGTTTGATGATGGAGTGTTGGCTTGTTTGGAGTATCTGGAGGCTGTTCCT
TGGTCCCAACAAGAAGAGGAACAAGTAGTATCTCATCTCAGTCAACTTCAGCTTCCCGAT
TCAGCAGCTGATATACTTCAGAGACTGGTTGCTGAACCATCAACATCTTCAAGATCCGAT
GACATTCTTCAGAGGATACTTACTGGTGTTTTACATGCCAAGGATGATAAAGCCCGCAAA
GAGATGAAAAAAGTGATATCTCGTTTGCTAAGAGAAAACACTAGCAATAGTAGCAGTCAT
GAAAGTAATCTTGATATCTCAAGGGATGCTCTCTATCATTTTTGTCATAGATGCCTCACT
TCTCTAATACTTAGCTTGTCTGAAGCTACATCCGTGGATGATAACAGGCAGCAGGACCGA
GGGGTTCTAATGGGTGAGATTGCTCGTGAAGCAGACAATCTGCAGTGGCTAGTTGATATC
CTAATCGACAGGAAAATGGGGGATGAGTTTGTGAAACTATGGGCAGAACAAAAAGAACTC
TCCATTCTTCACTCCAAGATTCCCACCATGTATCGACATGAAATCAGCAAGATCACTGCA
CAACTTTGCATTGCAATTGGTAGGGGAAATTTGTTAGTGCCAAAAGATGTTAGATATTGT
TTGTTATCGACATGGCTGGAAAGTCTATATGACGATTTTGGGTGGATGAAGAGGGCTGGT
AGATCAATTGACAAGAAGCTGGTTGAAGAGGGACTTGGTCAGACTATTCTAACACTACCC
TTGGCTCAACAACAAACCATTCTGCTTAACTGGTTCGATCGATTCCTTAACAAAGGAGAT
GACTGTCCCAATATTCAGAGAGCTTTCGAAGTTTGGTGGAGAAGGTCATTCGTTAAACAA
TACACAGTCGATTCTCAGTTACAATTAGCTATCTTCGATTATACAGAGTGA