Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400065200
CDS Infomation

pacid=37460511 polypeptide=PGSC0003DMP400043961 locus=PGSC0003DMG400025339 ID=PGSC0003DMT400065200.v4.03 annot-version=v4.03
Sequence

ATGGCTGATGAGATTATCAATGCAAGTCATTCATCCTCTGAAGAAGAAGAACAAAATATT
GCTCCAAAATGTTCCGCAAGAAAAAAAGGAGGATGGACAGCCATTGCCTTCATTCTTGGG
AATGAATCGTTTGAGAAATTGGCGTCTGTTAGTTTGATATCGAACATGACTACATATTTG
CGGACGAAATATAATATGGGGGGCGTATTTTTGGTGAATGTGGTGAGTATATGGTCTGGC
TGCTCCAATATTACCCCTATAGCTGGTGCCTTCTTGGCTGATGCTCACCTTGGCAGGTTC
CTCACTCTACTCTTTGGTTCCCTTGCTTCTTTCCTGGGGATGGGGATGGTGACATTAACA
GCTGGAATCGACGAACTCAGGCCACCTCATTGTCAGGGCAATGCACGTTGTGAAGATCCA
CAAAAATGGCAGCTTGCTTACCTTTTTGCAGGTCTTGGATTTATGGCTATAGGTTCAGGA
GGTATTCGAGCCTGCAACATCGCATTTGGGGCTGATCAATTCGATACTAATACAGAGAAG
GGAAGGACTCAGCTCAAAAGTTTCTTCAATTGGTGGTACTTCTCATTCACTATAGCCCTT
ATCATTGCCCTCACAGTTGTTATCTACATCCAGACCAATATCAGTTGGTTTATAGGCTTC
CTGATTCCAACTTGCTGTTTAGCTCTTTCCATTATGATTTTCTTGATTGGTCGCAATTCT
TATATCCGTTTGAAGCCTCAAGGATGTGTTTTTATCGATATGGCAAAGGTTATAAATGCA
GCTTGCAGAAAAAGACACATTCATGATCTACCAACAGCAAGTTCCCTTTATGATCCTTCC
ACCAGAGAATCAGAAAACGAGCTATCGGTGCTTAAGCACACGGACAGATTCAAGTTCCTT
GATAAGGCCGCGGTGATTGTTGATCCTAACAGTGAATTGAATACTGAAGGAGTTGCTAAA
GATAGCTGGAGACTCTGTAATGTTGAACAGGTGGAAAGGCTGAAATGTGTTGTTGGAATT
TTACCCGTTTGGGTAGCTGGAATTACTTGTTTCATCACCATGGAACAGATGAATACGTTC
GGGGTACTTCAAGTAATTCAATCCAACACTAAAGTTGGGAATTTCATGATTCCTCCTGGG
TGGATGGGACTAGCATCCATGATTGCCCTGGCTATATGGATCTTCATCTACGAATGTGTA
TACATTCCAAATGCATCGAAAATCTCTAAGAAAGAAGCTAGATTGTCCCTCCAAATAAGA
ATCAAAATAGGTATCATCATGGCTATTCTTTGCTTATCAGTAGCTGCATTAGTTGAAACA
AGGCGCCGCGACTTAGCCCTGAAACAAGGCACATTCCTATCTCCACTTGGCATTGCATAC
TTTTTGCCTCAATTCATCTTATCAGGTTTGACAGAAGCATTTGCCGCGGTCTCCGTCATG
GAATTCTTGAATAACCAAGTACCAGAGACAATGAGAAGTGTAGCTGGAGCAATTTTCTTC
TTGAGCCTAAGCATTGCCAGTTACCTCAACACACTCATTGTCAATTTGGTTGAGATTTTA
AGCAGGCTAAACGGCGGAAAGCGGTGGTTGGGAGGTCATGACCTTAATGAAAACAAGCTA
GAACGTTTTTACCTTCTTATTGCTGGATTGGGAGTACTAAACTTCATATACTTCCATTTC
TTCGCGAGCCGTTACATTCAAAGTTATGAAGAATCAAAGAGGAGAAAGACTGTGTTGGAG
GATCGCGTTGATGCTGGATATGTCGATTTGCCAGAAAAGAAACCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400043961
PEP Infomation

pacid=37460511 transcript=PGSC0003DMT400065200 locus=PGSC0003DMG400025339 ID=PGSC0003DMT400065200.v4.03 annot-version=v4.03
Sequence

MADEIINASHSSSEEEEQNIAPKCSARKKGGWTAIAFILGNESFEKLASVSLISNMTTYL
RTKYNMGGVFLVNVVSIWSGCSNITPIAGAFLADAHLGRFLTLLFGSLASFLGMGMVTLT
AGIDELRPPHCQGNARCEDPQKWQLAYLFAGLGFMAIGSGGIRACNIAFGADQFDTNTEK
GRTQLKSFFNWWYFSFTIALIIALTVVIYIQTNISWFIGFLIPTCCLALSIMIFLIGRNS
YIRLKPQGCVFIDMAKVINAACRKRHIHDLPTASSLYDPSTRESENELSVLKHTDRFKFL
DKAAVIVDPNSELNTEGVAKDSWRLCNVEQVERLKCVVGILPVWVAGITCFITMEQMNTF
GVLQVIQSNTKVGNFMIPPGWMGLASMIALAIWIFIYECVYIPNASKISKKEARLSLQIR
IKIGIIMAILCLSVAALVETRRRDLALKQGTFLSPLGIAYFLPQFILSGLTEAFAAVSVM
EFLNNQVPETMRSVAGAIFFLSLSIASYLNTLIVNLVEILSRLNGGKRWLGGHDLNENKL
ERFYLLIAGLGVLNFIYFHFFASRYIQSYEESKRRKTVLEDRVDAGYVDLPEKKP*

Transcript Sequence

Transcript ID

PGSC0003DMT400065200
Transcript Infomation

pacid=37460511 locus=PGSC0003DMG400025339 ID=PGSC0003DMT400065200.v4.03 annot-version=v4.03
Sequence

ATGGCTGATGAGATTATCAATGCAAGTCATTCATCCTCTGAAGAAGAAGAACAAAATATT
GCTCCAAAATGTTCCGCAAGAAAAAAAGGAGGATGGACAGCCATTGCCTTCATTCTTGGG
AATGAATCGTTTGAGAAATTGGCGTCTGTTAGTTTGATATCGAACATGACTACATATTTG
CGGACGAAATATAATATGGGGGGCGTATTTTTGGTGAATGTGGTGAGTATATGGTCTGGC
TGCTCCAATATTACCCCTATAGCTGGTGCCTTCTTGGCTGATGCTCACCTTGGCAGGTTC
CTCACTCTACTCTTTGGTTCCCTTGCTTCTTTCCTGGGGATGGGGATGGTGACATTAACA
GCTGGAATCGACGAACTCAGGCCACCTCATTGTCAGGGCAATGCACGTTGTGAAGATCCA
CAAAAATGGCAGCTTGCTTACCTTTTTGCAGGTCTTGGATTTATGGCTATAGGTTCAGGA
GGTATTCGAGCCTGCAACATCGCATTTGGGGCTGATCAATTCGATACTAATACAGAGAAG
GGAAGGACTCAGCTCAAAAGTTTCTTCAATTGGTGGTACTTCTCATTCACTATAGCCCTT
ATCATTGCCCTCACAGTTGTTATCTACATCCAGACCAATATCAGTTGGTTTATAGGCTTC
CTGATTCCAACTTGCTGTTTAGCTCTTTCCATTATGATTTTCTTGATTGGTCGCAATTCT
TATATCCGTTTGAAGCCTCAAGGATGTGTTTTTATCGATATGGCAAAGGTTATAAATGCA
GCTTGCAGAAAAAGACACATTCATGATCTACCAACAGCAAGTTCCCTTTATGATCCTTCC
ACCAGAGAATCAGAAAACGAGCTATCGGTGCTTAAGCACACGGACAGATTCAAGTTCCTT
GATAAGGCCGCGGTGATTGTTGATCCTAACAGTGAATTGAATACTGAAGGAGTTGCTAAA
GATAGCTGGAGACTCTGTAATGTTGAACAGGTGGAAAGGCTGAAATGTGTTGTTGGAATT
TTACCCGTTTGGGTAGCTGGAATTACTTGTTTCATCACCATGGAACAGATGAATACGTTC
GGGGTACTTCAAGTAATTCAATCCAACACTAAAGTTGGGAATTTCATGATTCCTCCTGGG
TGGATGGGACTAGCATCCATGATTGCCCTGGCTATATGGATCTTCATCTACGAATGTGTA
TACATTCCAAATGCATCGAAAATCTCTAAGAAAGAAGCTAGATTGTCCCTCCAAATAAGA
ATCAAAATAGGTATCATCATGGCTATTCTTTGCTTATCAGTAGCTGCATTAGTTGAAACA
AGGCGCCGCGACTTAGCCCTGAAACAAGGCACATTCCTATCTCCACTTGGCATTGCATAC
TTTTTGCCTCAATTCATCTTATCAGGTTTGACAGAAGCATTTGCCGCGGTCTCCGTCATG
GAATTCTTGAATAACCAAGTACCAGAGACAATGAGAAGTGTAGCTGGAGCAATTTTCTTC
TTGAGCCTAAGCATTGCCAGTTACCTCAACACACTCATTGTCAATTTGGTTGAGATTTTA
AGCAGGCTAAACGGCGGAAAGCGGTGGTTGGGAGGTCATGACCTTAATGAAAACAAGCTA
GAACGTTTTTACCTTCTTATTGCTGGATTGGGAGTACTAAACTTCATATACTTCCATTTC
TTCGCGAGCCGTTACATTCAAAGTTATGAAGAATCAAAGAGGAGAAAGACTGTGTTGGAG
GATCGCGTTGATGCTGGATATGTCGATTTGCCAGAAAAGAAACCATAG