Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400065196
CDS Infomation

pacid=37462587 polypeptide=PGSC0003DMP400043958 locus=PGSC0003DMG400025336 ID=PGSC0003DMT400065196.v4.03 annot-version=v4.03
Sequence

ATGGAAAAGAAAACAACAAGTTTTAGAGATGAGGATACTGAAAAAGAGCCTGAAATTAAC
TACAGAGGAGTGAAAGCCATGCCATTTATCATTGGAAATGAAACCTTTGAGAAACTTGGA
GCAATTGGGACACTGTCCAACTTGTTGATATACCTCACATCAGTTTTCAACTTGAAGCAT
ATCTCAGCTGTTACTTTGATCAATGTTTTCAATGGAACCACAAATTTCGCCACTTTGCTT
GGAGCTTTCTTATCGGATACTTACTTTGGTCGTTACAAAACATTGGGATTTTCATCCATT
ACTTCATTTCTGGGGTTGTTTGTGATAGCATTAACAGCAGTATTCAAGAAATTGCATCCT
CCTCACTGTGAATCCAAAGATATCAGCCAATGTATAGGACCAACAGGATGGCAAATGGCA
TTCTTGTTGAGTGGATTCGGGCTACTGATTATAGGAGCAGCTGGAATTAGGCCATGTAAC
TTAGCCTTTGGTGCAGACCAATTCAATCCCAATACAGAGTCTGGTAAAAGGGGTATCAAT
AGTTTTTTTAATTGGTACTTTTTCACCTTAACATTTGCACAAATGGTGTCAGTGACACTC
GTGGTTTACGTGCAATCAGACATAAGCTGGTCCATCGGATTAGCCATTCCTGCAATCTTC
ATGTTGATTTCGTGTTTCCTCTTCTTTGGTGGCACTAAAATTTATGTCAAAGTGAAACCA
GAGGGAAGTCCCTTGACAAGTATAGCACAGGTCCTGGTTGTTTCTATCAAGAAAAGAAGG
CTAAAATTACCAGACCAACCTTGGCAATCACTGTTCAATTACACTCCTCTCAAGTCCATC
AATTCCAAGCTTCCTTACACTCATCAATTCAGGTTTCTTGACAAGGCTGCAATAGTAACA
CCAGAAGACCAAATCAAGTCAGATGGATCAGTAGTAAATCCATGGAACCTATGCAGTGTG
CAGCAAGTGCAAGAAGCTAAATGTGTTATAAGAGTAATTCCTATTTGGGCTGCAGCAATT
ATATATCATGTTGCAATAGTTGAACAGCAACAATTTGTTGTCTACCAAGCTCTTCAATCA
AACAGACATCTTGGCACCAGCAACTTCCAAATTCCAGCAGCAACTTACACTATTTTCTCC
ATGTTAAGTCTCACTCTCTGGATACCCATATATGACCGTATAGTCGTTCCATTACTCCGA
AGAATCACTGGAAAAGAAGGTGGTATAACAATCCTTCAAAGAATGGGATTTGGCATATTC
CTCACAGTTCTATCATCCCTCGTATCTGCATTCATCGAGAAACGAAGGAGAAACCTAGTT
TTCACAAATCCAGCATTAGGGCTACATGCAGAAAGAGGATTGGTTTCTTCCATGTCAGCT
TTATGGTTGGTGCCTCAGTTATCCTTAGCAGGACTTGCAGAGGCATTTTGCGCAATTGGA
CAAGTGGAGTTCTACTACAAACAGTTCCCGGAAAATATGAGAAGCATAGCAGGGTCTTTC
CTCTTCTTGGGAATGGCTGCTTCAAGTTACTTGAACAGTTTATTGATCTATATTGTGCAC
AACACAACAGGAAAGGCGAAAACAGGCAATTGGCTACCGGAAGACCTTAACAAGGGGAAA
TTGGATTACTTCTATTTCTTGATTACAGCGCTGGGAATCATGAATGTTGTCTATTTCATA
ATATGTGCTAGGTGGTACAAGTACAAGGGAAGTGGTGACACCAGCTCCGTAGAATTGGAA
ATGGAAAGGAAAAATGTCGAGAAACACTTTGTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400043958
PEP Infomation

pacid=37462587 transcript=PGSC0003DMT400065196 locus=PGSC0003DMG400025336 ID=PGSC0003DMT400065196.v4.03 annot-version=v4.03
Sequence

MEKKTTSFRDEDTEKEPEINYRGVKAMPFIIGNETFEKLGAIGTLSNLLIYLTSVFNLKH
ISAVTLINVFNGTTNFATLLGAFLSDTYFGRYKTLGFSSITSFLGLFVIALTAVFKKLHP
PHCESKDISQCIGPTGWQMAFLLSGFGLLIIGAAGIRPCNLAFGADQFNPNTESGKRGIN
SFFNWYFFTLTFAQMVSVTLVVYVQSDISWSIGLAIPAIFMLISCFLFFGGTKIYVKVKP
EGSPLTSIAQVLVVSIKKRRLKLPDQPWQSLFNYTPLKSINSKLPYTHQFRFLDKAAIVT
PEDQIKSDGSVVNPWNLCSVQQVQEAKCVIRVIPIWAAAIIYHVAIVEQQQFVVYQALQS
NRHLGTSNFQIPAATYTIFSMLSLTLWIPIYDRIVVPLLRRITGKEGGITILQRMGFGIF
LTVLSSLVSAFIEKRRRNLVFTNPALGLHAERGLVSSMSALWLVPQLSLAGLAEAFCAIG
QVEFYYKQFPENMRSIAGSFLFLGMAASSYLNSLLIYIVHNTTGKAKTGNWLPEDLNKGK
LDYFYFLITALGIMNVVYFIICARWYKYKGSGDTSSVELEMERKNVEKHFV*

Transcript Sequence

Transcript ID

PGSC0003DMT400065196
Transcript Infomation

pacid=37462587 locus=PGSC0003DMG400025336 ID=PGSC0003DMT400065196.v4.03 annot-version=v4.03
Sequence

ATGGAAAAGAAAACAACAAGTTTTAGAGATGAGGATACTGAAAAAGAGCCTGAAATTAAC
TACAGAGGAGTGAAAGCCATGCCATTTATCATTGGAAATGAAACCTTTGAGAAACTTGGA
GCAATTGGGACACTGTCCAACTTGTTGATATACCTCACATCAGTTTTCAACTTGAAGCAT
ATCTCAGCTGTTACTTTGATCAATGTTTTCAATGGAACCACAAATTTCGCCACTTTGCTT
GGAGCTTTCTTATCGGATACTTACTTTGGTCGTTACAAAACATTGGGATTTTCATCCATT
ACTTCATTTCTGGGGTTGTTTGTGATAGCATTAACAGCAGTATTCAAGAAATTGCATCCT
CCTCACTGTGAATCCAAAGATATCAGCCAATGTATAGGACCAACAGGATGGCAAATGGCA
TTCTTGTTGAGTGGATTCGGGCTACTGATTATAGGAGCAGCTGGAATTAGGCCATGTAAC
TTAGCCTTTGGTGCAGACCAATTCAATCCCAATACAGAGTCTGGTAAAAGGGGTATCAAT
AGTTTTTTTAATTGGTACTTTTTCACCTTAACATTTGCACAAATGGTGTCAGTGACACTC
GTGGTTTACGTGCAATCAGACATAAGCTGGTCCATCGGATTAGCCATTCCTGCAATCTTC
ATGTTGATTTCGTGTTTCCTCTTCTTTGGTGGCACTAAAATTTATGTCAAAGTGAAACCA
GAGGGAAGTCCCTTGACAAGTATAGCACAGGTCCTGGTTGTTTCTATCAAGAAAAGAAGG
CTAAAATTACCAGACCAACCTTGGCAATCACTGTTCAATTACACTCCTCTCAAGTCCATC
AATTCCAAGCTTCCTTACACTCATCAATTCAGGTTTCTTGACAAGGCTGCAATAGTAACA
CCAGAAGACCAAATCAAGTCAGATGGATCAGTAGTAAATCCATGGAACCTATGCAGTGTG
CAGCAAGTGCAAGAAGCTAAATGTGTTATAAGAGTAATTCCTATTTGGGCTGCAGCAATT
ATATATCATGTTGCAATAGTTGAACAGCAACAATTTGTTGTCTACCAAGCTCTTCAATCA
AACAGACATCTTGGCACCAGCAACTTCCAAATTCCAGCAGCAACTTACACTATTTTCTCC
ATGTTAAGTCTCACTCTCTGGATACCCATATATGACCGTATAGTCGTTCCATTACTCCGA
AGAATCACTGGAAAAGAAGGTGGTATAACAATCCTTCAAAGAATGGGATTTGGCATATTC
CTCACAGTTCTATCATCCCTCGTATCTGCATTCATCGAGAAACGAAGGAGAAACCTAGTT
TTCACAAATCCAGCATTAGGGCTACATGCAGAAAGAGGATTGGTTTCTTCCATGTCAGCT
TTATGGTTGGTGCCTCAGTTATCCTTAGCAGGACTTGCAGAGGCATTTTGCGCAATTGGA
CAAGTGGAGTTCTACTACAAACAGTTCCCGGAAAATATGAGAAGCATAGCAGGGTCTTTC
CTCTTCTTGGGAATGGCTGCTTCAAGTTACTTGAACAGTTTATTGATCTATATTGTGCAC
AACACAACAGGAAAGGCGAAAACAGGCAATTGGCTACCGGAAGACCTTAACAAGGGGAAA
TTGGATTACTTCTATTTCTTGATTACAGCGCTGGGAATCATGAATGTTGTCTATTTCATA
ATATGTGCTAGGTGGTACAAGTACAAGGGAAGTGGTGACACCAGCTCCGTAGAATTGGAA
ATGGAAAGGAAAAATGTCGAGAAACACTTTGTTTGA