Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400065179
CDS Infomation

pacid=37460867 polypeptide=PGSC0003DMP400043947 locus=PGSC0003DMG400025332 ID=PGSC0003DMT400065179.v4.03 annot-version=v4.03
Sequence

ATGAATGCGCAGCTTCATCTCCGTTCTAGTTATCTCCCTAATCATTGCATTTTGCTTCCA
CCGACGTCTTTTTCGTCCTCGCACACATTTTCTGTACTGAATTCTTCAAATGAAAACAGA
ATCTTAGGACTTGGGAGATTGGGTTTGAACGAAAGAATACTAGCAAACAGGACAGTAACT
AAAAGAAAAAAATCCATTAGAGCATCGGCAGGAGTATGGGATGGTTGGATGCCAGAAAAG
TCCTCGAAAGCTCCTCCACTAAGTGACATTATTTGGCCTTCTGCAGGGGCATTTGCGGCA
ATGGCGATGCTAGGAAAAATAGACCAAATATTGGCAGCAAAAGGGATATCTATGACTATA
GCTCCACTAGGAGCTGTTTGTGCTGTCCTATTTGCCACTCCTGCTTCTCCCGGTGCTAGG
AAGTACAATATGTTTATGGCACAAATCGGTTGTGCAGCCATTGGTGTTTTGGCATTAACA
ATATTGGGCCCATGTTGGCTAGCTCGAAGCACCGCCCTTTCTGCTGCCATGGCTTTCATG
ATTTATACTCGCTCTGTTCATCCTCCTGCTGCAAGTTTGCCGCTATTGTTCATTGATGGA
GCTAAGTTGCATCAGCTCAACTATTGGTATGCTCTGTTCCCTGGAGCTGCTGGTTGCATT
CTTCTCTGTTTAATACAAGAGATTGTGTGTTACCTAAAAGAAAATGTCAAATTCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400043947
PEP Infomation

pacid=37460867 transcript=PGSC0003DMT400065179 locus=PGSC0003DMG400025332 ID=PGSC0003DMT400065179.v4.03 annot-version=v4.03
Sequence

MNAQLHLRSSYLPNHCILLPPTSFSSSHTFSVLNSSNENRILGLGRLGLNERILANRTVT
KRKKSIRASAGVWDGWMPEKSSKAPPLSDIIWPSAGAFAAMAMLGKIDQILAAKGISMTI
APLGAVCAVLFATPASPGARKYNMFMAQIGCAAIGVLALTILGPCWLARSTALSAAMAFM
IYTRSVHPPAASLPLLFIDGAKLHQLNYWYALFPGAAGCILLCLIQEIVCYLKENVKF*

Transcript Sequence

Transcript ID

PGSC0003DMT400065179
Transcript Infomation

pacid=37460867 locus=PGSC0003DMG400025332 ID=PGSC0003DMT400065179.v4.03 annot-version=v4.03
Sequence

ATGAATGCGCAGCTTCATCTCCGTTCTAGTTATCTCCCTAATCATTGCATTTTGCTTCCA
CCGACGTCTTTTTCGTCCTCGCACACATTTTCTGTACTGAATTCTTCAAATGAAAACAGA
ATCTTAGGACTTGGGAGATTGGGTTTGAACGAAAGAATACTAGCAAACAGGACAGTAACT
AAAAGAAAAAAATCCATTAGAGCATCGGCAGGAGTATGGGATGGTTGGATGCCAGAAAAG
TCCTCGAAAGCTCCTCCACTAAGTGACATTATTTGGCCTTCTGCAGGGGCATTTGCGGCA
ATGGCGATGCTAGGAAAAATAGACCAAATATTGGCAGCAAAAGGGATATCTATGACTATA
GCTCCACTAGGAGCTGTTTGTGCTGTCCTATTTGCCACTCCTGCTTCTCCCGGTGCTAGG
AAGTACAATATGTTTATGGCACAAATCGGTTGTGCAGCCATTGGTGTTTTGGCATTAACA
ATATTGGGCCCATGTTGGCTAGCTCGAAGCACCGCCCTTTCTGCTGCCATGGCTTTCATG
ATTTATACTCGCTCTGTTCATCCTCCTGCTGCAAGTTTGCCGCTATTGTTCATTGATGGA
GCTAAGTTGCATCAGCTCAACTATTGGTATGCTCTGTTCCCTGGAGCTGCTGGTTGCATT
CTTCTCTGTTTAATACAAGAGATTGTGTGTTACCTAAAAGAAAATGTCAAATTCTGA