Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400065173
CDS Infomation

pacid=37463761 polypeptide=PGSC0003DMP400043942 locus=PGSC0003DMG400025330 ID=PGSC0003DMT400065173.v4.03 annot-version=v4.03
Sequence

ATGGGTGTCTCGGATTTGATCTTTTTGGGACTATTTACGATGACCATTTTCAGTAGAAGC
TGTTTTTCACTAACCCCAGATGGTTCTGCTTTGTTGGAAATGAGAACCCTTTTGAATGAT
ACAAAAAATGTTTTGAGCAACTGGAATGATTCGGATGAGTCGCCTTGTAGGTGGACAGGC
ATTTCTTGCTATCCTAATGACCAAAGAGTTCAATCTATCAACTTACCTTATATGGAACTT
GGAGGAATTATATCTCCTAGCGTTGGTAAACTCACCAGATTGCAGAGATTGGCACTTCAC
GAAAACAGTCTGCACGGTGTGATTCCTAATGAGATTGGCAATTGCCCTGAACTCAGAGCT
ATATACCTCAGGGCAAATTTTCTTCAAGGAGGCATACCATCAGATATTGGAAATCTTTCA
ATACTGACCATATTAGATTTATCAAGCAATTCACTTAGGGGTGCTATACCTTCTTCTCTT
GGTCGTCTCAGACATCTTCGTCTTCTGAACTTGTCAGCCAATTTCTTCTCGGGTGAGATC
CCAGATGTTGGAATACTGAGCACTTTTGGTAACGATTCGTTTATTGGCAATTTAGATCTC
TGTGGTCAACAAGTCCGCAAGCCTTGCAGAACATCTATGGGATTCCCTGTAGTATTGCCT
CATGCTGAAAGCGATGAAGCTGCAGTCCCTACGAAGCGATCCTCTCACTATATTAGAGCA
GCAGTTATTGGTGCAATATCTACATTGGGTTTTGTACTCATTGTGTTCTTTATTTTCCTC
TGGGTTTGGTTGTTATCTAAGAAGGAAAGGACAGCAAAAAAATACACAGAAGTCAAGAAA
CAAGTCCACAAAGAGCCAAGTGCCAAGCTTATTACTTTCCATGGAGATCTTCCTTATCCT
TCATGCGAGCTAATAGAGAAGATTGAATCCCTTGATGAGGAAGATGTTGTTGGGGCAGGA
GGGTTTGGTACTGTATATCGGATGGTTATGAATGATTGTGGAACATTTGCTGTTAAAAGA
ATAGACCGGAATCGTGAAGGCTCTGATCAAGTCTTTGAGAGAGAGTTAGAAATCTTGGGT
AGCATCAAACACATTAATCTGGTCAATCTACGAGGTTACTGCAGGCTTCCTACTGCAAGG
CTTCTCATCTATGATTATTTGGTCATGGGAAGCTTGGACAATTTCCTACATGAACGTGTG
GATGATCGGTTGTTAAACTGGAATGCACGTCTGAAAGTAGCTCTTGGTTCTGCAAGAGGA
TTGGCCTACCTACATCATGACTGTTGTCCTAAAATAGTTCATCGAGATATCAAATCAAGC
AACATACTCCTTGATGAGAATCTAGAGCCTCGTGTTTCAGACTTTGGCCTTGCCAAGCTT
TTGGTGGATGAGGAAGCTCATGTCACGACTGTGGTTGCGGGTACTTTTGGTTATTTAGCA
CCAGAGTACTTGCAAAGTGGAAGAGCCACAGAGAAATCTGATGTGTACAGCTTTGGGGTT
CTCCTTTTAGAGCTTGTGACTGGAAAAAGGCCAACAGATCCATCCTTCGTAAACCGAGGC
TTAAATGTGGTTGGCTGGATGAATACCTTGCTGAAGGAGAATAGACTGGAAGACATCCTT
GATGCGAGTTGCAGAGAAGCCGATGCAGAGACGGTAGAAGCAATTATAGAAATAGCTGCA
AGATGCACTGATGCAAATCCAGATGATAGACCTACAATGCAACAGGTGCTGCAATATTTG
GAGCAAGAGGTCATGTCACCATGCCCGAGTGATTTCTATGACGAGTCTCATTCAGATTAT
TCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400043942
PEP Infomation

pacid=37463761 transcript=PGSC0003DMT400065173 locus=PGSC0003DMG400025330 ID=PGSC0003DMT400065173.v4.03 annot-version=v4.03
Sequence

MGVSDLIFLGLFTMTIFSRSCFSLTPDGSALLEMRTLLNDTKNVLSNWNDSDESPCRWTG
ISCYPNDQRVQSINLPYMELGGIISPSVGKLTRLQRLALHENSLHGVIPNEIGNCPELRA
IYLRANFLQGGIPSDIGNLSILTILDLSSNSLRGAIPSSLGRLRHLRLLNLSANFFSGEI
PDVGILSTFGNDSFIGNLDLCGQQVRKPCRTSMGFPVVLPHAESDEAAVPTKRSSHYIRA
AVIGAISTLGFVLIVFFIFLWVWLLSKKERTAKKYTEVKKQVHKEPSAKLITFHGDLPYP
SCELIEKIESLDEEDVVGAGGFGTVYRMVMNDCGTFAVKRIDRNREGSDQVFERELEILG
SIKHINLVNLRGYCRLPTARLLIYDYLVMGSLDNFLHERVDDRLLNWNARLKVALGSARG
LAYLHHDCCPKIVHRDIKSSNILLDENLEPRVSDFGLAKLLVDEEAHVTTVVAGTFGYLA
PEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPSFVNRGLNVVGWMNTLLKENRLEDIL
DASCREADAETVEAIIEIAARCTDANPDDRPTMQQVLQYLEQEVMSPCPSDFYDESHSDY
S*

Transcript Sequence

Transcript ID

PGSC0003DMT400065173
Transcript Infomation

pacid=37463761 locus=PGSC0003DMG400025330 ID=PGSC0003DMT400065173.v4.03 annot-version=v4.03
Sequence

ATGGGTGTCTCGGATTTGATCTTTTTGGGACTATTTACGATGACCATTTTCAGTAGAAGC
TGTTTTTCACTAACCCCAGATGGTTCTGCTTTGTTGGAAATGAGAACCCTTTTGAATGAT
ACAAAAAATGTTTTGAGCAACTGGAATGATTCGGATGAGTCGCCTTGTAGGTGGACAGGC
ATTTCTTGCTATCCTAATGACCAAAGAGTTCAATCTATCAACTTACCTTATATGGAACTT
GGAGGAATTATATCTCCTAGCGTTGGTAAACTCACCAGATTGCAGAGATTGGCACTTCAC
GAAAACAGTCTGCACGGTGTGATTCCTAATGAGATTGGCAATTGCCCTGAACTCAGAGCT
ATATACCTCAGGGCAAATTTTCTTCAAGGAGGCATACCATCAGATATTGGAAATCTTTCA
ATACTGACCATATTAGATTTATCAAGCAATTCACTTAGGGGTGCTATACCTTCTTCTCTT
GGTCGTCTCAGACATCTTCGTCTTCTGAACTTGTCAGCCAATTTCTTCTCGGGTGAGATC
CCAGATGTTGGAATACTGAGCACTTTTGGTAACGATTCGTTTATTGGCAATTTAGATCTC
TGTGGTCAACAAGTCCGCAAGCCTTGCAGAACATCTATGGGATTCCCTGTAGTATTGCCT
CATGCTGAAAGCGATGAAGCTGCAGTCCCTACGAAGCGATCCTCTCACTATATTAGAGCA
GCAGTTATTGGTGCAATATCTACATTGGGTTTTGTACTCATTGTGTTCTTTATTTTCCTC
TGGGTTTGGTTGTTATCTAAGAAGGAAAGGACAGCAAAAAAATACACAGAAGTCAAGAAA
CAAGTCCACAAAGAGCCAAGTGCCAAGCTTATTACTTTCCATGGAGATCTTCCTTATCCT
TCATGCGAGCTAATAGAGAAGATTGAATCCCTTGATGAGGAAGATGTTGTTGGGGCAGGA
GGGTTTGGTACTGTATATCGGATGGTTATGAATGATTGTGGAACATTTGCTGTTAAAAGA
ATAGACCGGAATCGTGAAGGCTCTGATCAAGTCTTTGAGAGAGAGTTAGAAATCTTGGGT
AGCATCAAACACATTAATCTGGTCAATCTACGAGGTTACTGCAGGCTTCCTACTGCAAGG
CTTCTCATCTATGATTATTTGGTCATGGGAAGCTTGGACAATTTCCTACATGAACGTGTG
GATGATCGGTTGTTAAACTGGAATGCACGTCTGAAAGTAGCTCTTGGTTCTGCAAGAGGA
TTGGCCTACCTACATCATGACTGTTGTCCTAAAATAGTTCATCGAGATATCAAATCAAGC
AACATACTCCTTGATGAGAATCTAGAGCCTCGTGTTTCAGACTTTGGCCTTGCCAAGCTT
TTGGTGGATGAGGAAGCTCATGTCACGACTGTGGTTGCGGGTACTTTTGGTTATTTAGCA
CCAGAGTACTTGCAAAGTGGAAGAGCCACAGAGAAATCTGATGTGTACAGCTTTGGGGTT
CTCCTTTTAGAGCTTGTGACTGGAAAAAGGCCAACAGATCCATCCTTCGTAAACCGAGGC
TTAAATGTGGTTGGCTGGATGAATACCTTGCTGAAGGAGAATAGACTGGAAGACATCCTT
GATGCGAGTTGCAGAGAAGCCGATGCAGAGACGGTAGAAGCAATTATAGAAATAGCTGCA
AGATGCACTGATGCAAATCCAGATGATAGACCTACAATGCAACAGGTGCTGCAATATTTG
GAGCAAGAGGTCATGTCACCATGCCCGAGTGATTTCTATGACGAGTCTCATTCAGATTAT
TCTTGA