Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400065051
CDS Infomation

pacid=37450356 polypeptide=PGSC0003DMP400043862 locus=PGSC0003DMG400025276 ID=PGSC0003DMT400065051.v4.03 annot-version=v4.03
Sequence

ATGGCGGGTTCTAATCCAACCCCTTACTATACTCCAACCTCCAAACCCACTCCAACTTCC
CACCATTCTTCTTTACCTTTGAAAAAACCCAATTTTTATTCATTAATTGCCATCACTTTT
CTCTGCTCTGCTTTTTACTTCACCGGTTTATGGCAAAGCAGCACCACCGGCACCGGTGCC
GGCAGCAGCAGTGTCGTCATCACCACCACTTCCCTCCCCTGTTTCCCTTCTAAAAACACC
TCCACAAATCCTCCATCTTCAAGAACCACCACCAAAAAACTAGACTTCACCACCCATCAC
TCCGCTGCAGACGGCGGAGCAGCTGTTACAGCACCTGATGACGCAATCAAGATTTACCCT
GTTTGCGACATCAAGTACAGTGAGTATACCCCATGTGAAGACCCTGAAAGATCATTGAAA
TTCAACAGAAGAAGATTAATTTACAGAGAAAGGCATTGCCCTGAAAAGAATGAACTCTTG
AAATGCCGTATACCTGCACCGTACGGTTACAAGAATCCATTTAAATGGCCTGTTAGTAGA
GATGTTGCATGGTATGCTAATGTTCCTCATAAAGAATTGACAGTAGAAAAAGCCGTTCAA
AATTGGATTAGATATGAAGGTGACAAATTCAGATTTCCTGGTGGTGGAACTATGTTCCCT
AATGGTGCTGATGCTTATATTGATGACATTGCGAAATTGATCAATCTTAAAGATGGCTCC
ATTCGAACCGCCATTGATACTGGCTGTGGGGTTGCGAGTTGGGGAGCTTATCTTTTGTCA
CGAAATATCATAGCCATGTCATTTGCACCTAGGGATTCACATGAAGCACAGGTTCAATTT
GCTCTCGAGCGCGGAGTACCTGCTCTAATTGGAGTTATTGCCTCCAAGAGGCTTCCATAT
CCATCTAGAGCTTTTGACATGGCACATTGCTCTCGTTGTCTAATTCCATGGGGGGAGTAT
GATGGCACGTATTTGATTGAAGTTGATAGAGTCCTTAGACCTGGTGGATTTTGGATCCTC
TCTGGCCCGCCGATCAACTGGAAAAGACATTGGAAAGGCTGGGAAAGAACCAGGGAAGAC
CTATATGCTGAACAAAATAAAATTGAGCAAGTAGCTAAGAGACTCTGCTGGAAAAAGTTT
GTTGAGAAGGATGATATCGCAATATGGCAGAAGCCGTTCAATCATATGAAGTGTACAGAA
TTTCGAAACAGAAACAAAAACCCACCAATGTGTCCTGCACAAGATCCTGATAAAGCCTGG
TATACAAAGATTGAAACTTGTTTAACTCCCTTGCCTAAAGTTGCAAGTGAAGAAGAGGTG
GCAGGTGGACAATTGGAAAAGTGGCCTAAAAGATTACACGTAATACCACCGAGGATAAGC
AGGGGAACTGTAGATGGAGTCACAGAAGAAGTTTTCCAGAAGGATTCACAGCTATGGAAA
AGAAGAGTATCTTATTACAAGTCAGTGAATAACCAGCTTGACCAGCCTGGGCGATACAGA
AATATCTTAGATATGAATGCATTCCTAGGTGGCTTTGCTGCAAATTTGGTCAATGATCCT
GTTTGGGTGATGAATATAGTTCCCCTTGAGGCTAAGGTCAATACACTTGGTGCTATTTAT
GAACGAGGACTAATCGGAACATACCAGAGCTGGTGCGAGGCTATGTCAACTTACCCAAGA
ACATATGATCTCATTCATGCTGATTCCGTATTTACCCTCTACGAAAACAGATGTGAAATG
GAAGATATTATGCTAGAATTGGATAGGATATTAAGGCCAGAGGGAAGTGTAATAATCCGA
GACGACGTAGATATATTGATCAGAGTGAAAAGAATAGCAGATGGACTGAACTGGGATAGT
CAAATTGTTGATCATGAAGATGGTCCATTGGAGAGGGAGAAGCTTTTCTTTGCAGTAAAG
ACATACTCGACAGCTCCAGCTACTCAACCATCTAAAACTACTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400043862
PEP Infomation

pacid=37450356 transcript=PGSC0003DMT400065051 locus=PGSC0003DMG400025276 ID=PGSC0003DMT400065051.v4.03 annot-version=v4.03
Sequence

MAGSNPTPYYTPTSKPTPTSHHSSLPLKKPNFYSLIAITFLCSAFYFTGLWQSSTTGTGA
GSSSVVITTTSLPCFPSKNTSTNPPSSRTTTKKLDFTTHHSAADGGAAVTAPDDAIKIYP
VCDIKYSEYTPCEDPERSLKFNRRRLIYRERHCPEKNELLKCRIPAPYGYKNPFKWPVSR
DVAWYANVPHKELTVEKAVQNWIRYEGDKFRFPGGGTMFPNGADAYIDDIAKLINLKDGS
IRTAIDTGCGVASWGAYLLSRNIIAMSFAPRDSHEAQVQFALERGVPALIGVIASKRLPY
PSRAFDMAHCSRCLIPWGEYDGTYLIEVDRVLRPGGFWILSGPPINWKRHWKGWERTRED
LYAEQNKIEQVAKRLCWKKFVEKDDIAIWQKPFNHMKCTEFRNRNKNPPMCPAQDPDKAW
YTKIETCLTPLPKVASEEEVAGGQLEKWPKRLHVIPPRISRGTVDGVTEEVFQKDSQLWK
RRVSYYKSVNNQLDQPGRYRNILDMNAFLGGFAANLVNDPVWVMNIVPLEAKVNTLGAIY
ERGLIGTYQSWCEAMSTYPRTYDLIHADSVFTLYENRCEMEDIMLELDRILRPEGSVIIR
DDVDILIRVKRIADGLNWDSQIVDHEDGPLEREKLFFAVKTYSTAPATQPSKTT*

Transcript Sequence

Transcript ID

PGSC0003DMT400065051
Transcript Infomation

pacid=37450356 locus=PGSC0003DMG400025276 ID=PGSC0003DMT400065051.v4.03 annot-version=v4.03
Sequence

ATGGCGGGTTCTAATCCAACCCCTTACTATACTCCAACCTCCAAACCCACTCCAACTTCC
CACCATTCTTCTTTACCTTTGAAAAAACCCAATTTTTATTCATTAATTGCCATCACTTTT
CTCTGCTCTGCTTTTTACTTCACCGGTTTATGGCAAAGCAGCACCACCGGCACCGGTGCC
GGCAGCAGCAGTGTCGTCATCACCACCACTTCCCTCCCCTGTTTCCCTTCTAAAAACACC
TCCACAAATCCTCCATCTTCAAGAACCACCACCAAAAAACTAGACTTCACCACCCATCAC
TCCGCTGCAGACGGCGGAGCAGCTGTTACAGCACCTGATGACGCAATCAAGATTTACCCT
GTTTGCGACATCAAGTACAGTGAGTATACCCCATGTGAAGACCCTGAAAGATCATTGAAA
TTCAACAGAAGAAGATTAATTTACAGAGAAAGGCATTGCCCTGAAAAGAATGAACTCTTG
AAATGCCGTATACCTGCACCGTACGGTTACAAGAATCCATTTAAATGGCCTGTTAGTAGA
GATGTTGCATGGTATGCTAATGTTCCTCATAAAGAATTGACAGTAGAAAAAGCCGTTCAA
AATTGGATTAGATATGAAGGTGACAAATTCAGATTTCCTGGTGGTGGAACTATGTTCCCT
AATGGTGCTGATGCTTATATTGATGACATTGCGAAATTGATCAATCTTAAAGATGGCTCC
ATTCGAACCGCCATTGATACTGGCTGTGGGGTTGCGAGTTGGGGAGCTTATCTTTTGTCA
CGAAATATCATAGCCATGTCATTTGCACCTAGGGATTCACATGAAGCACAGGTTCAATTT
GCTCTCGAGCGCGGAGTACCTGCTCTAATTGGAGTTATTGCCTCCAAGAGGCTTCCATAT
CCATCTAGAGCTTTTGACATGGCACATTGCTCTCGTTGTCTAATTCCATGGGGGGAGTAT
GATGGCACGTATTTGATTGAAGTTGATAGAGTCCTTAGACCTGGTGGATTTTGGATCCTC
TCTGGCCCGCCGATCAACTGGAAAAGACATTGGAAAGGCTGGGAAAGAACCAGGGAAGAC
CTATATGCTGAACAAAATAAAATTGAGCAAGTAGCTAAGAGACTCTGCTGGAAAAAGTTT
GTTGAGAAGGATGATATCGCAATATGGCAGAAGCCGTTCAATCATATGAAGTGTACAGAA
TTTCGAAACAGAAACAAAAACCCACCAATGTGTCCTGCACAAGATCCTGATAAAGCCTGG
TATACAAAGATTGAAACTTGTTTAACTCCCTTGCCTAAAGTTGCAAGTGAAGAAGAGGTG
GCAGGTGGACAATTGGAAAAGTGGCCTAAAAGATTACACGTAATACCACCGAGGATAAGC
AGGGGAACTGTAGATGGAGTCACAGAAGAAGTTTTCCAGAAGGATTCACAGCTATGGAAA
AGAAGAGTATCTTATTACAAGTCAGTGAATAACCAGCTTGACCAGCCTGGGCGATACAGA
AATATCTTAGATATGAATGCATTCCTAGGTGGCTTTGCTGCAAATTTGGTCAATGATCCT
GTTTGGGTGATGAATATAGTTCCCCTTGAGGCTAAGGTCAATACACTTGGTGCTATTTAT
GAACGAGGACTAATCGGAACATACCAGAGCTGGTGCGAGGCTATGTCAACTTACCCAAGA
ACATATGATCTCATTCATGCTGATTCCGTATTTACCCTCTACGAAAACAGATGTGAAATG
GAAGATATTATGCTAGAATTGGATAGGATATTAAGGCCAGAGGGAAGTGTAATAATCCGA
GACGACGTAGATATATTGATCAGAGTGAAAAGAATAGCAGATGGACTGAACTGGGATAGT
CAAATTGTTGATCATGAAGATGGTCCATTGGAGAGGGAGAAGCTTTTCTTTGCAGTAAAG
ACATACTCGACAGCTCCAGCTACTCAACCATCTAAAACTACTTAA