Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400065015
CDS Infomation

pacid=37441112 polypeptide=PGSC0003DMP400043834 locus=PGSC0003DMG400025256 ID=PGSC0003DMT400065015.v4.03 annot-version=v4.03
Sequence

ATGAAGCTAATAGTAGAAGTAATAGATGCTTATGATCTTATGCCAAAAGATGGTGAAGGA
TCAGTAAGTGCATTTGTTGAAGTTGATTTTGAAAACCAACTTAGCAAAACTAGAACTGTC
CCAAAAAATCTCAACCCCACTTGGAACCATAAACTAATTTTCCATCTTGACGATATCAAA
AATCATCGATACAAATACATTGATGTTTCTGTGTATCATGAGAGAAGGCCTATACCAGGG
AGAAACTTTCTTGGAAGGGTGAGAATTCCTTGCTCAAATATAGTCAAGAAAGGGGAAGAA
GTTTATCAAAGATTCCAACTTGAAAAGAAATGGTTTTCCTCATTTGTTAAAGGAGAGATT
GGCCTCAAAATATATATTTCATCACCATCTGATCCAAATTTATATCCTAAAAAATCTTCT
ATCCAGCCAACCCCAAAATCTTCTAGTCCTTCAAATATCCCGTCCATCGAAAATCCAGAA
CATTTAGATAATCCACCACCTTCACTTCCTGCCTCTGAAGATTCTAGTCTTGATACTCCT
AAAGCTAGTAAAAGTTCAGAAGTACAAAAGACTGAAAACACTGCAATTTCTGCTGCTGAT
CAGTCTTCAAGCTTTGCTGTAGTAGAAAAAACTGGTCATCTTACTCCAAGTGAGCAGGCC
ACAGAATCAGTTGAGCACATTGAAGAAAGATCTCAATTTGTATTCAAGCATCAAGCTATG
CAGCAACCAGTCATATCAATAAGGAAGAGACCAGGTTTCCAACCGACAATGCAGCATCAA
GTAGACCACCCCCGAGCTATTCATAGCCAGCCAGGTGTCCAACTGCCAATGCAGCATCAA
GTAGACCACCCCCGAGCTATTCATAGCCAGCCAGGTGTCCAACTGCCAATGCAGCATCAA
GTAGACCACCCCCGAGCTATTCATGGCCAGCCAGGTGTCCAACTGCCAATGCAGTATCAA
GTAGACCAACCCCGAACTATGCATAACCACCCTAAAGATGACTATGAGCTGAAGGACACG
AATCCTCAGCTTGGTGAGCAATGGCCACGTGGTGGAGGTTACGGAGGAAGAGGATGGATG
AACAGTGATAGACATGCAAGCACATATGACCTTGTGGAGCAGATGTTTTATCTTTATGTT
CGAGTGGTTAAGTCCAAAGATCTTCAACCAAGTGTCCTCACCGGTAGCTGTGACCCATAT
GTGGAGGTGAAGATGGGGAATTACAAAGGAAGGACAAAGCATTTTGATAAGAAAATGAAT
CCAGAGTGGAACCAGGTATTTGCTTTCTCTAAAGATCGAATTCAGTCTTCAGTTCTTGAA
GTTTATGTGAAGGATAAAGATATGATGGGAAGAGATGATAATTTTGGAAGGGTGGTTTTT
GACTTGAATGAGGTCCCAACAAGAGTTCCTCCTGATAGTCCCCTGGCTCCTCAATGGTAC
AGACTGGAGGATCGACGAGGAGAAAGGAAAGTAACAGGGGAGATCATGCTTGCTGTTTGG
ATGGGAACACAAGCAGATGAAGCATTTTCAGATGCCTGGCATGCAGATGCTGCCTTTGTT
CATGGAGAGGGGGTAATGAGCGTCAGGTCCAAAGTTTATGTCTCTCCAAAACTTTGGTAC
CTGAGAGTAAATGTTATTGAAGCTCAAGACATCATCCCAAATGACCAGAGCCGTCTCCCT
GAAGTTTTTGTGAAAGCCCAGGTGGGAAATCAGGTGCTCAAAACCGATATATGCCCTGCT
CGAACAGCAAATCCAATGTGGAATGAGGATTTGGTTTTTGTAGCTGCTGAGCCTTTTGAG
GAGCAGCTAGTCCTCAGCATTGAGGACCGTGTTCACCCAATGAAAGATGAGATTCTTGGA
AAGATAAGTTTCCCACTCAACACATTCGAGAAGAGGCTTGACCACAGGCCGGTCCATTCT
CGCTGGTTCAACCTTGAGAAGTTTGGTTTTGGTTCCTTGGAAGTTGACAGGAGGAAAGAG
CTCAAGTTTTCAAGCAGAGTTCACCTCAGAGTATGCCTTGAAGGGGGATATCACGTGCTG
GATGAGTCAACCATGTACATAAGTGATCAAAGGCCAACAGCACGACAGCTGTGGAAACCA
CCGGTGGGAATATTGGAAGTTGGCATATTAGGTGCAGAAGGGCTTCTTCCAATGAAGATG
AAGGACAGCAGAGGAAGCACAGATGCCTATTGTGTGGCTAAATATGGTCAGAAATGGGTA
AGGACAAGAACCATTCTTGACACTTTCAGCCCCAAATGGAATGAGCAATACACTTGGGAA
GTTTATGATCCATCCACAGTTATCACATTGGGTGTCTTTGATAACTGTCATTTGGGAGTT
GAGAAGCAAGGGACTGGAGCAGCACGAGACTCACGAATAGGGAAGGTACGTATAAGATTA
TCAACGTTAGAATCTCATCGAATTTACACTCATTCTTATCCCCTTCTTGTTCTGCACCCA
TCAGGGGTTAAGAAAATGGGGGAACTCCAATTGGCAGTAAGATTCACAAGCCTCTCTTTA
GCCAACATGATACATACTTATGGCCACCCTTTGCTTCCCAAAATGCACTACCTTCATCCC
TTTACTGTCAACCAAGTAGACAACTTGAGGTACCAAGCTATGAGCATTGTTGCTGTTAGA
CTTGCTAGAGCTGAACCACCACTCAGGAAAGAAGTTGTAGAGTACATGCTAGATGTGGAT
TCCCACATGTGGAGTATGAGAAGAAGCAAGGCTAATTTCTTTAGGATCATGTCACTTCTT
TCAGGCTTAATCTCTGTTAATCGATGGTTTGGTGATATATGTCACTGGAAAAATCCAGTC
ACCTCAGTCTTGGTTCACATCCTCTTCCTAATACTGATCTGGTATCCGGAGTTGATTCTT
CCAACTTTGTTTCTCTATATGTTCCTCATTGGACTGTGGAACTATCGGTTCCGGCCAAGG
CACCCTCCTCACATGGACACTAAGCTTTCATGGGCAGAAACAGCTCACCCTGATGAGCTT
GATGAAGAATTCGACACGTTTCCAACGTCTAGACCCCACGACATTGTTCGAATGAGGTAC
GATAGGCTGAGAAGTGTGGCTGGGAGGATTCAGACCGTGGTCGGTGACATAGCAACACAA
GGAGAGAGGCTGCAGGGGGTGCTAAGCTGGAGAGATCCAAGAGCAACAAGCTTGTTTATC
ATGTTCAGTCTTTTTGCTGCAGTTATGCTTTATGCGACTCCCTTCAGAGTGGTGGCTTTA
GTTGCTGGGTTATATATGTTGAGGCACCCTAGGTTCAGAAGCAAGATGCCTCCTGTTCCC
AGCAACTTCTTCAAGAGATTACCAGCCAGAACAGATAGCATGCTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400043834
PEP Infomation

pacid=37441112 transcript=PGSC0003DMT400065015 locus=PGSC0003DMG400025256 ID=PGSC0003DMT400065015.v4.03 annot-version=v4.03
Sequence

MKLIVEVIDAYDLMPKDGEGSVSAFVEVDFENQLSKTRTVPKNLNPTWNHKLIFHLDDIK
NHRYKYIDVSVYHERRPIPGRNFLGRVRIPCSNIVKKGEEVYQRFQLEKKWFSSFVKGEI
GLKIYISSPSDPNLYPKKSSIQPTPKSSSPSNIPSIENPEHLDNPPPSLPASEDSSLDTP
KASKSSEVQKTENTAISAADQSSSFAVVEKTGHLTPSEQATESVEHIEERSQFVFKHQAM
QQPVISIRKRPGFQPTMQHQVDHPRAIHSQPGVQLPMQHQVDHPRAIHSQPGVQLPMQHQ
VDHPRAIHGQPGVQLPMQYQVDQPRTMHNHPKDDYELKDTNPQLGEQWPRGGGYGGRGWM
NSDRHASTYDLVEQMFYLYVRVVKSKDLQPSVLTGSCDPYVEVKMGNYKGRTKHFDKKMN
PEWNQVFAFSKDRIQSSVLEVYVKDKDMMGRDDNFGRVVFDLNEVPTRVPPDSPLAPQWY
RLEDRRGERKVTGEIMLAVWMGTQADEAFSDAWHADAAFVHGEGVMSVRSKVYVSPKLWY
LRVNVIEAQDIIPNDQSRLPEVFVKAQVGNQVLKTDICPARTANPMWNEDLVFVAAEPFE
EQLVLSIEDRVHPMKDEILGKISFPLNTFEKRLDHRPVHSRWFNLEKFGFGSLEVDRRKE
LKFSSRVHLRVCLEGGYHVLDESTMYISDQRPTARQLWKPPVGILEVGILGAEGLLPMKM
KDSRGSTDAYCVAKYGQKWVRTRTILDTFSPKWNEQYTWEVYDPSTVITLGVFDNCHLGV
EKQGTGAARDSRIGKVRIRLSTLESHRIYTHSYPLLVLHPSGVKKMGELQLAVRFTSLSL
ANMIHTYGHPLLPKMHYLHPFTVNQVDNLRYQAMSIVAVRLARAEPPLRKEVVEYMLDVD
SHMWSMRRSKANFFRIMSLLSGLISVNRWFGDICHWKNPVTSVLVHILFLILIWYPELIL
PTLFLYMFLIGLWNYRFRPRHPPHMDTKLSWAETAHPDELDEEFDTFPTSRPHDIVRMRY
DRLRSVAGRIQTVVGDIATQGERLQGVLSWRDPRATSLFIMFSLFAAVMLYATPFRVVAL
VAGLYMLRHPRFRSKMPPVPSNFFKRLPARTDSML*

Transcript Sequence

Transcript ID

PGSC0003DMT400065015
Transcript Infomation

pacid=37441112 locus=PGSC0003DMG400025256 ID=PGSC0003DMT400065015.v4.03 annot-version=v4.03
Sequence

ATGAAGCTAATAGTAGAAGTAATAGATGCTTATGATCTTATGCCAAAAGATGGTGAAGGA
TCAGTAAGTGCATTTGTTGAAGTTGATTTTGAAAACCAACTTAGCAAAACTAGAACTGTC
CCAAAAAATCTCAACCCCACTTGGAACCATAAACTAATTTTCCATCTTGACGATATCAAA
AATCATCGATACAAATACATTGATGTTTCTGTGTATCATGAGAGAAGGCCTATACCAGGG
AGAAACTTTCTTGGAAGGGTGAGAATTCCTTGCTCAAATATAGTCAAGAAAGGGGAAGAA
GTTTATCAAAGATTCCAACTTGAAAAGAAATGGTTTTCCTCATTTGTTAAAGGAGAGATT
GGCCTCAAAATATATATTTCATCACCATCTGATCCAAATTTATATCCTAAAAAATCTTCT
ATCCAGCCAACCCCAAAATCTTCTAGTCCTTCAAATATCCCGTCCATCGAAAATCCAGAA
CATTTAGATAATCCACCACCTTCACTTCCTGCCTCTGAAGATTCTAGTCTTGATACTCCT
AAAGCTAGTAAAAGTTCAGAAGTACAAAAGACTGAAAACACTGCAATTTCTGCTGCTGAT
CAGTCTTCAAGCTTTGCTGTAGTAGAAAAAACTGGTCATCTTACTCCAAGTGAGCAGGCC
ACAGAATCAGTTGAGCACATTGAAGAAAGATCTCAATTTGTATTCAAGCATCAAGCTATG
CAGCAACCAGTCATATCAATAAGGAAGAGACCAGGTTTCCAACCGACAATGCAGCATCAA
GTAGACCACCCCCGAGCTATTCATAGCCAGCCAGGTGTCCAACTGCCAATGCAGCATCAA
GTAGACCACCCCCGAGCTATTCATAGCCAGCCAGGTGTCCAACTGCCAATGCAGCATCAA
GTAGACCACCCCCGAGCTATTCATGGCCAGCCAGGTGTCCAACTGCCAATGCAGTATCAA
GTAGACCAACCCCGAACTATGCATAACCACCCTAAAGATGACTATGAGCTGAAGGACACG
AATCCTCAGCTTGGTGAGCAATGGCCACGTGGTGGAGGTTACGGAGGAAGAGGATGGATG
AACAGTGATAGACATGCAAGCACATATGACCTTGTGGAGCAGATGTTTTATCTTTATGTT
CGAGTGGTTAAGTCCAAAGATCTTCAACCAAGTGTCCTCACCGGTAGCTGTGACCCATAT
GTGGAGGTGAAGATGGGGAATTACAAAGGAAGGACAAAGCATTTTGATAAGAAAATGAAT
CCAGAGTGGAACCAGGTATTTGCTTTCTCTAAAGATCGAATTCAGTCTTCAGTTCTTGAA
GTTTATGTGAAGGATAAAGATATGATGGGAAGAGATGATAATTTTGGAAGGGTGGTTTTT
GACTTGAATGAGGTCCCAACAAGAGTTCCTCCTGATAGTCCCCTGGCTCCTCAATGGTAC
AGACTGGAGGATCGACGAGGAGAAAGGAAAGTAACAGGGGAGATCATGCTTGCTGTTTGG
ATGGGAACACAAGCAGATGAAGCATTTTCAGATGCCTGGCATGCAGATGCTGCCTTTGTT
CATGGAGAGGGGGTAATGAGCGTCAGGTCCAAAGTTTATGTCTCTCCAAAACTTTGGTAC
CTGAGAGTAAATGTTATTGAAGCTCAAGACATCATCCCAAATGACCAGAGCCGTCTCCCT
GAAGTTTTTGTGAAAGCCCAGGTGGGAAATCAGGTGCTCAAAACCGATATATGCCCTGCT
CGAACAGCAAATCCAATGTGGAATGAGGATTTGGTTTTTGTAGCTGCTGAGCCTTTTGAG
GAGCAGCTAGTCCTCAGCATTGAGGACCGTGTTCACCCAATGAAAGATGAGATTCTTGGA
AAGATAAGTTTCCCACTCAACACATTCGAGAAGAGGCTTGACCACAGGCCGGTCCATTCT
CGCTGGTTCAACCTTGAGAAGTTTGGTTTTGGTTCCTTGGAAGTTGACAGGAGGAAAGAG
CTCAAGTTTTCAAGCAGAGTTCACCTCAGAGTATGCCTTGAAGGGGGATATCACGTGCTG
GATGAGTCAACCATGTACATAAGTGATCAAAGGCCAACAGCACGACAGCTGTGGAAACCA
CCGGTGGGAATATTGGAAGTTGGCATATTAGGTGCAGAAGGGCTTCTTCCAATGAAGATG
AAGGACAGCAGAGGAAGCACAGATGCCTATTGTGTGGCTAAATATGGTCAGAAATGGGTA
AGGACAAGAACCATTCTTGACACTTTCAGCCCCAAATGGAATGAGCAATACACTTGGGAA
GTTTATGATCCATCCACAGTTATCACATTGGGTGTCTTTGATAACTGTCATTTGGGAGTT
GAGAAGCAAGGGACTGGAGCAGCACGAGACTCACGAATAGGGAAGGTACGTATAAGATTA
TCAACGTTAGAATCTCATCGAATTTACACTCATTCTTATCCCCTTCTTGTTCTGCACCCA
TCAGGGGTTAAGAAAATGGGGGAACTCCAATTGGCAGTAAGATTCACAAGCCTCTCTTTA
GCCAACATGATACATACTTATGGCCACCCTTTGCTTCCCAAAATGCACTACCTTCATCCC
TTTACTGTCAACCAAGTAGACAACTTGAGGTACCAAGCTATGAGCATTGTTGCTGTTAGA
CTTGCTAGAGCTGAACCACCACTCAGGAAAGAAGTTGTAGAGTACATGCTAGATGTGGAT
TCCCACATGTGGAGTATGAGAAGAAGCAAGGCTAATTTCTTTAGGATCATGTCACTTCTT
TCAGGCTTAATCTCTGTTAATCGATGGTTTGGTGATATATGTCACTGGAAAAATCCAGTC
ACCTCAGTCTTGGTTCACATCCTCTTCCTAATACTGATCTGGTATCCGGAGTTGATTCTT
CCAACTTTGTTTCTCTATATGTTCCTCATTGGACTGTGGAACTATCGGTTCCGGCCAAGG
CACCCTCCTCACATGGACACTAAGCTTTCATGGGCAGAAACAGCTCACCCTGATGAGCTT
GATGAAGAATTCGACACGTTTCCAACGTCTAGACCCCACGACATTGTTCGAATGAGGTAC
GATAGGCTGAGAAGTGTGGCTGGGAGGATTCAGACCGTGGTCGGTGACATAGCAACACAA
GGAGAGAGGCTGCAGGGGGTGCTAAGCTGGAGAGATCCAAGAGCAACAAGCTTGTTTATC
ATGTTCAGTCTTTTTGCTGCAGTTATGCTTTATGCGACTCCCTTCAGAGTGGTGGCTTTA
GTTGCTGGGTTATATATGTTGAGGCACCCTAGGTTCAGAAGCAAGATGCCTCCTGTTCCC
AGCAACTTCTTCAAGAGATTACCAGCCAGAACAGATAGCATGCTGTGA