Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400065014
CDS Infomation

pacid=37438682 polypeptide=PGSC0003DMP400043833 locus=PGSC0003DMG400025255 ID=PGSC0003DMT400065014.v4.03 annot-version=v4.03
Sequence

ATGTTTTATTCGCACACATTCTTGGCTCGAAAGGGTCCATTAGGGACTGTATGGTGCGCT
GCACACTTGCAACACAAGTTGAAGAAGCCTCATTATACTTCTACTAACATTCCATCTACT
GTTGAGCGCATCATGACTCCTGAAGTACCTATTGCACTGCGAACGTCTGGCCACCTTCTA
CTTGGAGTTGTTCGGATATACTCGAAGCAGGTTGAATACTTTTCTGAGGACTGCAAAACA
TTACTAATGGGAGTTATAAAGGCCTTCTCGTCCACAAATGTCAATCTCCCAGAAGATGCC
ACTCATGCACCATACAGCTCCATCACTTTACCAGAAACGTTTGAACTTGATGCCATAGTT
TTTGATGAAGATTTTGACCTGAACAGGATTAAGGATACTCATGTTAAAAGTTATGAAGAG
ATAACTTTGGAAGATCAAATTGTATCGCATGAAGATCAGTATGTTGCTATTTTCATTGAT
GAGGACATAGTGAAGAGTTTGTCAAAATCAGGTGAAGTTTCTGGATTAGGTGCCATGCCT
ATGGAGATAGATTCTGATCCTTCAAATCCAGATGAAACTGGTGCTCAACCCCAACATTCT
TCCCCTAAGAATCAGGAAGGACTAAATAAAAGAACTGTTTGTGATGACATCCCTCAAGAT
ATTCCAGATATTGAACTCATGCGTGACGCTGTCCATGATCACAGTTTTGAGAATGTTCCC
TTGTGGTCAGACCGAGGGAATGATGTGATGGAACCAGATAGAGTTCTGGAGGAACAGATC
ATGAGAGACAAGGAAACTGCAAGCCCAGTTGTGAAAGAGATATTGGCCCCCGGAGGACAT
TCAATCCCATCTCAACAACGACAAGAACCACCGTCAACTACTTCAGCGGAGGCTCATGAA
TTTGCTGATCCACAGATATCATTTGGGCATCAGTCACCTGATTTAGCACTTCTTTCAACA
CCTCCTCTCGAGGCGCCAAAAATAAGAAGAAAGCGAAAGCTACTCATCTATGATAAGGAC
ATTGTATTGCCAAATAATGAGATGAAAAGGAGACTAAAGGGCATCGGTATAAAACCACGC
GAAAAGAAGAAGGTTCCTTGTTCTTCTTTGGACATCTGGAAACAAAACCAGAGACTAAGA
AAGGATGGAATTTTCTTTGAACCTATAATAACTGGATTATGCTATGATCTTTGCAATATC
TACAAGAAAGACTTCATTTCAGCAAAAGTCAAGATGGCTTCCTCACAGGAGAATCATGCA
GAACCCAGCAATAACCAAGCCCCTCCATCTGAGAATGATCTTCCGGTGGAAATTGAAAGA
TTACGTGATAACCAAGACCTTGCAAGCACCAATTTGCTGTCTGAGATTTTGCCTTCACCA
AATAGGCCCATTTCCTCTCCACAGATGTCTATGCCTTCCCCAAGTAGGCTCATTTCTTCT
CCACTGATGTCCATGCCTTCCACAAGCAGAAGAGATGACTTCAGTCCTGCTACTACAACT
TTTGGGACAGAATCTAGTCAGATAGGAAGAACCATGGATAGTGGGGTGCAGCCCACGCCT
GACCCAGCAGCATCTACTGGGCATGTTGGTTCTGATATGGAGACCCCTTCAACATGGTTT
GGAGAAGGACTAGGTGTGGAGGATACTGTTCTATCTGATATTCCTGAGTTTGATAATTCT
GCTGGGGATCTAAGTTTTCTAGAACAAGATGACGAAACTCCTATTGGACTTCGAGGAACT
CCTTTATCAAGTAAGCAAAAGGGAACGCCAGAGTTTGACACATTATCTGCTAGAACAAGA
GCTGTGGCTCAATATTTGAAGGGGCAGTCACCAGTAACCCCCATCTCAGAAGAGACTGGA
GATATCAGCTTAAATGCAATTTTAGAAGGCAAAAAGAAAAGAATATGTGCCCGAATGTTT
TATGAGACTCTGGTGTTGGAGAATTGTGGACTTGTACGTGCGAATCAACATGAACCTTAT
GGTGATATAACTCTGAAAGTGACTTCCAAACTGACGGAGAAATTGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400043833
PEP Infomation

pacid=37438682 transcript=PGSC0003DMT400065014 locus=PGSC0003DMG400025255 ID=PGSC0003DMT400065014.v4.03 annot-version=v4.03
Sequence

MFYSHTFLARKGPLGTVWCAAHLQHKLKKPHYTSTNIPSTVERIMTPEVPIALRTSGHLL
LGVVRIYSKQVEYFSEDCKTLLMGVIKAFSSTNVNLPEDATHAPYSSITLPETFELDAIV
FDEDFDLNRIKDTHVKSYEEITLEDQIVSHEDQYVAIFIDEDIVKSLSKSGEVSGLGAMP
MEIDSDPSNPDETGAQPQHSSPKNQEGLNKRTVCDDIPQDIPDIELMRDAVHDHSFENVP
LWSDRGNDVMEPDRVLEEQIMRDKETASPVVKEILAPGGHSIPSQQRQEPPSTTSAEAHE
FADPQISFGHQSPDLALLSTPPLEAPKIRRKRKLLIYDKDIVLPNNEMKRRLKGIGIKPR
EKKKVPCSSLDIWKQNQRLRKDGIFFEPIITGLCYDLCNIYKKDFISAKVKMASSQENHA
EPSNNQAPPSENDLPVEIERLRDNQDLASTNLLSEILPSPNRPISSPQMSMPSPSRLISS
PLMSMPSTSRRDDFSPATTTFGTESSQIGRTMDSGVQPTPDPAASTGHVGSDMETPSTWF
GEGLGVEDTVLSDIPEFDNSAGDLSFLEQDDETPIGLRGTPLSSKQKGTPEFDTLSARTR
AVAQYLKGQSPVTPISEETGDISLNAILEGKKKRICARMFYETLVLENCGLVRANQHEPY
GDITLKVTSKLTEKL*

Transcript Sequence

Transcript ID

PGSC0003DMT400065014
Transcript Infomation

pacid=37438682 locus=PGSC0003DMG400025255 ID=PGSC0003DMT400065014.v4.03 annot-version=v4.03
Sequence

ATGTTTTATTCGCACACATTCTTGGCTCGAAAGGGTCCATTAGGGACTGTATGGTGCGCT
GCACACTTGCAACACAAGTTGAAGAAGCCTCATTATACTTCTACTAACATTCCATCTACT
GTTGAGCGCATCATGACTCCTGAAGTACCTATTGCACTGCGAACGTCTGGCCACCTTCTA
CTTGGAGTTGTTCGGATATACTCGAAGCAGGTTGAATACTTTTCTGAGGACTGCAAAACA
TTACTAATGGGAGTTATAAAGGCCTTCTCGTCCACAAATGTCAATCTCCCAGAAGATGCC
ACTCATGCACCATACAGCTCCATCACTTTACCAGAAACGTTTGAACTTGATGCCATAGTT
TTTGATGAAGATTTTGACCTGAACAGGATTAAGGATACTCATGTTAAAAGTTATGAAGAG
ATAACTTTGGAAGATCAAATTGTATCGCATGAAGATCAGTATGTTGCTATTTTCATTGAT
GAGGACATAGTGAAGAGTTTGTCAAAATCAGGTGAAGTTTCTGGATTAGGTGCCATGCCT
ATGGAGATAGATTCTGATCCTTCAAATCCAGATGAAACTGGTGCTCAACCCCAACATTCT
TCCCCTAAGAATCAGGAAGGACTAAATAAAAGAACTGTTTGTGATGACATCCCTCAAGAT
ATTCCAGATATTGAACTCATGCGTGACGCTGTCCATGATCACAGTTTTGAGAATGTTCCC
TTGTGGTCAGACCGAGGGAATGATGTGATGGAACCAGATAGAGTTCTGGAGGAACAGATC
ATGAGAGACAAGGAAACTGCAAGCCCAGTTGTGAAAGAGATATTGGCCCCCGGAGGACAT
TCAATCCCATCTCAACAACGACAAGAACCACCGTCAACTACTTCAGCGGAGGCTCATGAA
TTTGCTGATCCACAGATATCATTTGGGCATCAGTCACCTGATTTAGCACTTCTTTCAACA
CCTCCTCTCGAGGCGCCAAAAATAAGAAGAAAGCGAAAGCTACTCATCTATGATAAGGAC
ATTGTATTGCCAAATAATGAGATGAAAAGGAGACTAAAGGGCATCGGTATAAAACCACGC
GAAAAGAAGAAGGTTCCTTGTTCTTCTTTGGACATCTGGAAACAAAACCAGAGACTAAGA
AAGGATGGAATTTTCTTTGAACCTATAATAACTGGATTATGCTATGATCTTTGCAATATC
TACAAGAAAGACTTCATTTCAGCAAAAGTCAAGATGGCTTCCTCACAGGAGAATCATGCA
GAACCCAGCAATAACCAAGCCCCTCCATCTGAGAATGATCTTCCGGTGGAAATTGAAAGA
TTACGTGATAACCAAGACCTTGCAAGCACCAATTTGCTGTCTGAGATTTTGCCTTCACCA
AATAGGCCCATTTCCTCTCCACAGATGTCTATGCCTTCCCCAAGTAGGCTCATTTCTTCT
CCACTGATGTCCATGCCTTCCACAAGCAGAAGAGATGACTTCAGTCCTGCTACTACAACT
TTTGGGACAGAATCTAGTCAGATAGGAAGAACCATGGATAGTGGGGTGCAGCCCACGCCT
GACCCAGCAGCATCTACTGGGCATGTTGGTTCTGATATGGAGACCCCTTCAACATGGTTT
GGAGAAGGACTAGGTGTGGAGGATACTGTTCTATCTGATATTCCTGAGTTTGATAATTCT
GCTGGGGATCTAAGTTTTCTAGAACAAGATGACGAAACTCCTATTGGACTTCGAGGAACT
CCTTTATCAAGTAAGCAAAAGGGAACGCCAGAGTTTGACACATTATCTGCTAGAACAAGA
GCTGTGGCTCAATATTTGAAGGGGCAGTCACCAGTAACCCCCATCTCAGAAGAGACTGGA
GATATCAGCTTAAATGCAATTTTAGAAGGCAAAAAGAAAAGAATATGTGCCCGAATGTTT
TATGAGACTCTGGTGTTGGAGAATTGTGGACTTGTACGTGCGAATCAACATGAACCTTAT
GGTGATATAACTCTGAAAGTGACTTCCAAACTGACGGAGAAATTGTAG